BLASTX nr result

ID: Coptis23_contig00009171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009171
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331815.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-63
ref|XP_002522583.1| conserved hypothetical protein [Ricinus comm...   192   2e-62
emb|CAN72178.1| hypothetical protein VITISV_012478 [Vitis vinifera]   192   9e-62
ref|XP_002317458.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-61
gb|AFK49191.1| unknown [Medicago truncatula]                          191   6e-61

>ref|XP_002331815.1| predicted protein [Populus trichocarpa] gi|222874511|gb|EEF11642.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  194 bits (492), Expect(2) = 8e-63
 Identities = 90/115 (78%), Positives = 97/115 (84%), Gaps = 5/115 (4%)
 Frame = -2

Query: 562 MMSNKGKEAAEGSSSRPV-----SEPAPLSRYESQKKRDWNTFGQYLKNQRPPVSLSQCN 398
           M SNKGK+ AEGSS           P PLSRYESQK+RDWNTFGQYL+NQRPPV+LSQCN
Sbjct: 1   MSSNKGKDVAEGSSRAVAMAPDQQNPPPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCN 60

Query: 397 YSHVLEFLHYLDQFGKTKVHLNGCIFFGQPEPPAPCTCPLRQAWGSLDALIGRLR 233
            +HVLEFL YLDQFGKTKVHL GC+FFGQPEPP PCTCPL+QAWGSLDALIGRLR
Sbjct: 61  ANHVLEFLRYLDQFGKTKVHLQGCVFFGQPEPPGPCTCPLKQAWGSLDALIGRLR 115



 Score = 72.8 bits (177), Expect(2) = 8e-63
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -3

Query: 138 AAYEENGGSPETNPFGSSTIRVYLREVRESQAKARGIPY 22
           AAYEENGG PETNPF S  IRVYLREVR+SQAKARGIPY
Sbjct: 116 AAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPY 154


>ref|XP_002522583.1| conserved hypothetical protein [Ricinus communis]
           gi|223538274|gb|EEF39883.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score =  192 bits (487), Expect(2) = 2e-62
 Identities = 90/116 (77%), Positives = 100/116 (86%), Gaps = 6/116 (5%)
 Frame = -2

Query: 562 MMSNKGKEAAEGSSSRPVSE------PAPLSRYESQKKRDWNTFGQYLKNQRPPVSLSQC 401
           M  +K K++AEGSS     +      PAPLSRYESQK+RDWNTFGQYLKNQRPPVSLSQC
Sbjct: 1   MSGDKPKDSAEGSSRSGGDQQLIPHQPAPLSRYESQKRRDWNTFGQYLKNQRPPVSLSQC 60

Query: 400 NYSHVLEFLHYLDQFGKTKVHLNGCIFFGQPEPPAPCTCPLRQAWGSLDALIGRLR 233
           N +HVL+FL YLDQFGKTKVHL+GC+FFGQP+PPAPCTCPLRQAWGSLDALIGRLR
Sbjct: 61  NCNHVLDFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLR 116



 Score = 73.6 bits (179), Expect(2) = 2e-62
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -3

Query: 138 AAYEENGGSPETNPFGSSTIRVYLREVRESQAKARGIPY 22
           AAYEE+GGSPETNPFG+  IRVYLREVRE QAKARGIPY
Sbjct: 117 AAYEEHGGSPETNPFGNGAIRVYLREVRECQAKARGIPY 155


>emb|CAN72178.1| hypothetical protein VITISV_012478 [Vitis vinifera]
          Length = 175

 Score =  192 bits (487), Expect(2) = 9e-62
 Identities = 87/113 (76%), Positives = 101/113 (89%), Gaps = 3/113 (2%)
 Frame = -2

Query: 562 MMSNKGKEAAEGSS---SRPVSEPAPLSRYESQKKRDWNTFGQYLKNQRPPVSLSQCNYS 392
           M +++ +++AEGSS     P  +P PLSRYESQK+RDWNTFGQYLKNQRPPVSL+QC+ +
Sbjct: 1   MSNDRKRDSAEGSSRSTGEPQQQPQPLSRYESQKRRDWNTFGQYLKNQRPPVSLAQCSCN 60

Query: 391 HVLEFLHYLDQFGKTKVHLNGCIFFGQPEPPAPCTCPLRQAWGSLDALIGRLR 233
           HVLEFL YLDQFGKTKVHL+GC+FFGQP+PPAPCTCPLRQAWGSLDALIGRLR
Sbjct: 61  HVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLR 113



 Score = 71.2 bits (173), Expect(2) = 9e-62
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -3

Query: 138 AAYEENGGSPETNPFGSSTIRVYLREVRESQAKARGIPY 22
           AAYEE+GGSPETNPFG+  IRVYLREVR+ Q+KARGIPY
Sbjct: 114 AAYEEHGGSPETNPFGNGAIRVYLREVRDCQSKARGIPY 152


>ref|XP_002317458.1| predicted protein [Populus trichocarpa] gi|222860523|gb|EEE98070.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  189 bits (480), Expect(2) = 2e-61
 Identities = 88/115 (76%), Positives = 97/115 (84%), Gaps = 5/115 (4%)
 Frame = -2

Query: 562 MMSNKGKEAAEGSSSRPVS-----EPAPLSRYESQKKRDWNTFGQYLKNQRPPVSLSQCN 398
           M SNKGK+ AEGSS    +      P PLSRYESQK+RDWNTFGQYL+NQRPPV+LSQCN
Sbjct: 1   MSSNKGKDIAEGSSRGGANAPDQQSPPPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCN 60

Query: 397 YSHVLEFLHYLDQFGKTKVHLNGCIFFGQPEPPAPCTCPLRQAWGSLDALIGRLR 233
            + VL+FL YLDQFGKTKVHL GC+FFGQPEPP PCTCPL+QAWGSLDALIGRLR
Sbjct: 61  ANQVLDFLRYLDQFGKTKVHLQGCVFFGQPEPPGPCTCPLKQAWGSLDALIGRLR 115



 Score = 72.8 bits (177), Expect(2) = 2e-61
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -3

Query: 138 AAYEENGGSPETNPFGSSTIRVYLREVRESQAKARGIPY 22
           AAYEENGG PETNPF S  IRVYLREVR+SQAKARGIPY
Sbjct: 116 AAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPY 154


>gb|AFK49191.1| unknown [Medicago truncatula]
          Length = 184

 Score =  191 bits (485), Expect(2) = 6e-61
 Identities = 89/116 (76%), Positives = 98/116 (84%)
 Frame = -2

Query: 580 QNSPVVMMSNKGKEAAEGSSSRPVSEPAPLSRYESQKKRDWNTFGQYLKNQRPPVSLSQC 401
           QN  V   S+  +    GS  +P +  APLSRYESQKKRDWNTFGQYL+NQ PPVSLSQC
Sbjct: 6   QNDTVQASSSSSRPG--GSDQQPTAAVAPLSRYESQKKRDWNTFGQYLRNQSPPVSLSQC 63

Query: 400 NYSHVLEFLHYLDQFGKTKVHLNGCIFFGQPEPPAPCTCPLRQAWGSLDALIGRLR 233
           N++HVLEFL YLDQFGKTKVHL+GCIFFGQP+PPAPCTCPLRQAWGSLDALIGRLR
Sbjct: 64  NFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLR 119



 Score = 69.3 bits (168), Expect(2) = 6e-61
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -3

Query: 138 AAYEENGGSPETNPFGSSTIRVYLREVRESQAKARGIPY 22
           AAYEE+GGSPE NPFG+  IRVYLREV+E Q+KARGIPY
Sbjct: 120 AAYEEHGGSPENNPFGTGAIRVYLREVKECQSKARGIPY 158


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