BLASTX nr result

ID: Coptis23_contig00009157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009157
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301429.1| SAUR family protein [Populus trichocarpa] gi...   134   4e-29
ref|XP_003548198.1| PREDICTED: auxin-induced protein 10A5-like [...   132   9e-29
ref|XP_002320219.1| SAUR family protein [Populus trichocarpa] gi...   132   1e-28
ref|XP_002273092.1| PREDICTED: indole-3-acetic acid-induced prot...   132   1e-28
ref|XP_002876644.1| auxin-responsive family protein [Arabidopsis...   131   2e-28

>ref|XP_002301429.1| SAUR family protein [Populus trichocarpa]
           gi|222843155|gb|EEE80702.1| SAUR family protein [Populus
           trichocarpa]
          Length = 111

 Score =  134 bits (336), Expect = 4e-29
 Identities = 71/114 (62%), Positives = 78/114 (68%)
 Frame = +2

Query: 326 MGSGDKXXXXXXXXXXXXXXXGKNKEVRDIPKGYLAIIVGQDAEEQQRFVVPVMYVNHPL 505
           MG G+K                  K+ RD+PKG LAI VGQ  EEQQRFVVPV+Y NHPL
Sbjct: 1   MGGGEKSLKNFHLHLPNLHHHHHKKQARDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPL 59

Query: 506 FIQLLKEAEEEYGFNQKGTITIPCHVEEFRYVQDMIDRERTFXXXXXXXVGCFR 667
           FIQLLKEAEEEYGF+QKGTITIPCHVEEF YVQ MID+E+         VGCFR
Sbjct: 60  FIQLLKEAEEEYGFDQKGTITIPCHVEEFMYVQGMIDKEKPI---HHHHVGCFR 110


>ref|XP_003548198.1| PREDICTED: auxin-induced protein 10A5-like [Glycine max]
          Length = 116

 Score =  132 bits (333), Expect = 9e-29
 Identities = 69/115 (60%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +2

Query: 326 MGSGDKXXXXXXXXXXXXXXXGKNK--EVRDIPKGYLAIIVGQDAEEQQRFVVPVMYVNH 499
           MG G+K               GKNK  E R +PKG +AI VGQ  EEQQRFVVPV+Y+NH
Sbjct: 1   MGIGEKSPSKSFNLHHHHHREGKNKQQEFRGVPKGCMAIKVGQ-GEEQQRFVVPVIYINH 59

Query: 500 PLFIQLLKEAEEEYGFNQKGTITIPCHVEEFRYVQDMIDRERTFXXXXXXXVGCF 664
           PLF+QLLKEAEEEYGF+QKGTITIPCHVEEFR V+ +IDR+++        VGCF
Sbjct: 60  PLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHHHVGCF 114


>ref|XP_002320219.1| SAUR family protein [Populus trichocarpa]
           gi|222860992|gb|EEE98534.1| SAUR family protein [Populus
           trichocarpa]
          Length = 110

 Score =  132 bits (332), Expect = 1e-28
 Identities = 68/91 (74%), Positives = 75/91 (82%)
 Frame = +2

Query: 398 KEVRDIPKGYLAIIVGQDAEEQQRFVVPVMYVNHPLFIQLLKEAEEEYGFNQKGTITIPC 577
           K+ RD+PKG LAI VGQ  EEQQRFVVPV+Y NHPLFIQLLKEAEEEYGF+QKGTI+IPC
Sbjct: 23  KQARDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPLFIQLLKEAEEEYGFDQKGTISIPC 81

Query: 578 HVEEFRYVQDMIDRERTFXXXXXXXVGCFRA 670
           HVEEFR VQ MIDRE++        VGCFRA
Sbjct: 82  HVEEFRNVQGMIDREKSI--HHHHLVGCFRA 110


>ref|XP_002273092.1| PREDICTED: indole-3-acetic acid-induced protein ARG7 [Vitis
           vinifera] gi|147833400|emb|CAN64099.1| hypothetical
           protein VITISV_014898 [Vitis vinifera]
          Length = 121

 Score =  132 bits (331), Expect = 1e-28
 Identities = 66/101 (65%), Positives = 78/101 (77%)
 Frame = +2

Query: 326 MGSGDKXXXXXXXXXXXXXXXGKNKEVRDIPKGYLAIIVGQDAEEQQRFVVPVMYVNHPL 505
           MGSG+K                K KE+RDIPKG LA++VGQ  EEQQRFV+PV+Y+NHPL
Sbjct: 1   MGSGEKNFLNFHMHVHHGNGNNK-KEMRDIPKGCLAVLVGQ-GEEQQRFVIPVIYINHPL 58

Query: 506 FIQLLKEAEEEYGFNQKGTITIPCHVEEFRYVQDMIDRERT 628
           F++LLKEAEEEYGF QKG ITIPCHVEEFRYVQ MID+E++
Sbjct: 59  FMELLKEAEEEYGFEQKGPITIPCHVEEFRYVQGMIDKEKS 99


>ref|XP_002876644.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322482|gb|EFH52903.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  131 bits (330), Expect = 2e-28
 Identities = 64/101 (63%), Positives = 74/101 (73%)
 Frame = +2

Query: 326 MGSGDKXXXXXXXXXXXXXXXGKNKEVRDIPKGYLAIIVGQDAEEQQRFVVPVMYVNHPL 505
           MGSG+K                  + ++D+PKG LAI VG   EE+QRFVVPV YVNHPL
Sbjct: 1   MGSGEKIFKSVHSNRSNNVKSNSKQGIKDVPKGCLAIKVGSKEEEKQRFVVPVFYVNHPL 60

Query: 506 FIQLLKEAEEEYGFNQKGTITIPCHVEEFRYVQDMIDRERT 628
           F+QLL+EAEEEYGF QKGTITIPCHVE FRYVQDMI+RER+
Sbjct: 61  FMQLLREAEEEYGFEQKGTITIPCHVEVFRYVQDMINRERS 101


Top