BLASTX nr result

ID: Coptis23_contig00009146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009146
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]                       180   2e-43
ref|XP_003542329.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   179   4e-43
ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   179   4e-43
ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   179   4e-43
ref|XP_003638319.1| Ubiquitin carboxyl-terminal hydrolase family...   178   1e-42

>dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
          Length = 1118

 Score =  180 bits (457), Expect = 2e-43
 Identities = 80/114 (70%), Positives = 100/114 (87%)
 Frame = +3

Query: 27  NFSKLNTKKLYSDIYVINGYKWRVLIYPKGNGVNFLSVYLDVADSTSLSQGWSIFADYGL 206
           NFS++N KKLYS+++V+ GYKWRVLI+PKGN V++LS+YLDVADST+L  GWS +A + L
Sbjct: 63  NFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSTNLPYGWSRYAQFSL 122

Query: 207 SVVNQRNRRYTVRKDTKHQFNARESDWGFTSFISLGELRDPGKGFLLNDTLIVE 368
           +VVNQ   +YTVRKDT+HQFNARESDWGFTSF+ LGEL DP +G+LLNDTL+VE
Sbjct: 123 AVVNQIQNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLLNDTLVVE 176



 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = +1

Query: 460 TTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYLSMYL 639
           T ++    + P S F W I NFSR+N+KK YSE F VGGYKWRVLI+PKGNNVDYLSMYL
Sbjct: 43  TVESQPVEEPPQSRFTWRIDNFSRMNVKKLYSEVFVVGGYKWRVLIFPKGNNVDYLSMYL 102

Query: 640 DVAHAPDLPCGWSTNAQFSLSVVNQVYSKYTVQ 738
           DVA + +LP GWS  AQFSL+VVNQ+ +KYTV+
Sbjct: 103 DVADSTNLPYGWSRYAQFSLAVVNQIQNKYTVR 135


>ref|XP_003542329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Glycine
           max]
          Length = 1118

 Score =  179 bits (455), Expect = 4e-43
 Identities = 81/114 (71%), Positives = 101/114 (88%)
 Frame = +3

Query: 27  NFSKLNTKKLYSDIYVINGYKWRVLIYPKGNGVNFLSVYLDVADSTSLSQGWSIFADYGL 206
           NFS+LNTKKLYS+I+V+ GYKWRVLI+PKGN V++LS+YLDVADS SL  GWS +A + L
Sbjct: 63  NFSRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYAQFSL 122

Query: 207 SVVNQRNRRYTVRKDTKHQFNARESDWGFTSFISLGELRDPGKGFLLNDTLIVE 368
           +VVNQ + +Y+VRKDT+HQFNARESDWGFTSF+ LGEL DP +G+L++DTLIVE
Sbjct: 123 AVVNQMHNKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVHDTLIVE 176



 Score =  131 bits (329), Expect = 2e-28
 Identities = 63/95 (66%), Positives = 74/95 (77%)
 Frame = +1

Query: 454 SGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYLSM 633
           + T ++    D PSS F W I NFSRLN KK YSE F VGGYKWRVLI+PKGNNVDYLSM
Sbjct: 41  ANTVESQPVEDPPSSRFTWRIDNFSRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSM 100

Query: 634 YLDVAHAPDLPCGWSTNAQFSLSVVNQVYSKYTVQ 738
           YLDVA +  LP GWS  AQFSL+VVNQ+++KY+V+
Sbjct: 101 YLDVADSASLPYGWSRYAQFSLAVVNQMHNKYSVR 135


>ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 1118

 Score =  179 bits (455), Expect = 4e-43
 Identities = 80/114 (70%), Positives = 101/114 (88%)
 Frame = +3

Query: 27  NFSKLNTKKLYSDIYVINGYKWRVLIYPKGNGVNFLSVYLDVADSTSLSQGWSIFADYGL 206
           NFS++NTKKLYS+I+V+ GYKWRVLI+PKGN V++LS+YLDVADS SL  GWS +A + L
Sbjct: 64  NFSRMNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYAQFSL 123

Query: 207 SVVNQRNRRYTVRKDTKHQFNARESDWGFTSFISLGELRDPGKGFLLNDTLIVE 368
           +VVNQ + +Y+VRKDT+HQFNARESDWGFTSF+ LGEL DP +G+L+NDTL+VE
Sbjct: 124 AVVNQIHNKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLVVE 177



 Score =  127 bits (320), Expect = 2e-27
 Identities = 60/95 (63%), Positives = 73/95 (76%)
 Frame = +1

Query: 454 SGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYLSM 633
           + T ++    D  +S F W I NFSR+N KK YSE F VGGYKWRVLI+PKGNNVDYLSM
Sbjct: 42  ANTVESQPVEDPSTSRFTWKIENFSRMNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSM 101

Query: 634 YLDVAHAPDLPCGWSTNAQFSLSVVNQVYSKYTVQ 738
           YLDVA +  LP GWS  AQFSL+VVNQ+++KY+V+
Sbjct: 102 YLDVADSASLPYGWSRYAQFSLAVVNQIHNKYSVR 136


>ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355518341|gb|AES99964.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 1123

 Score =  179 bits (455), Expect = 4e-43
 Identities = 80/114 (70%), Positives = 100/114 (87%)
 Frame = +3

Query: 27  NFSKLNTKKLYSDIYVINGYKWRVLIYPKGNGVNFLSVYLDVADSTSLSQGWSIFADYGL 206
           NFS++N KKLYSD++V+  YKWRVLI+PKGN V++LS+YLDVADSTSL  GWS +A + L
Sbjct: 68  NFSRVNLKKLYSDVFVVGSYKWRVLIFPKGNNVDYLSMYLDVADSTSLPYGWSRYAQFSL 127

Query: 207 SVVNQRNRRYTVRKDTKHQFNARESDWGFTSFISLGELRDPGKGFLLNDTLIVE 368
           +VVNQ + +YTVRKDT+HQFNARESDWGFTSF+ LGEL DP +G+L+NDTLI+E
Sbjct: 128 AVVNQIHNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLMNDTLIIE 181



 Score =  123 bits (309), Expect = 4e-26
 Identities = 58/85 (68%), Positives = 68/85 (80%)
 Frame = +1

Query: 484 DLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYLSMYLDVAHAPDL 663
           D   S F W I NFSR+N+KK YS+ F VG YKWRVLI+PKGNNVDYLSMYLDVA +  L
Sbjct: 56  DPSPSRFTWRIDNFSRVNLKKLYSDVFVVGSYKWRVLIFPKGNNVDYLSMYLDVADSTSL 115

Query: 664 PCGWSTNAQFSLSVVNQVYSKYTVQ 738
           P GWS  AQFSL+VVNQ+++KYTV+
Sbjct: 116 PYGWSRYAQFSLAVVNQIHNKYTVR 140


>ref|XP_003638319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
           truncatula] gi|355504254|gb|AES85457.1| Ubiquitin
           carboxyl-terminal hydrolase family protein [Medicago
           truncatula]
          Length = 368

 Score =  178 bits (451), Expect = 1e-42
 Identities = 78/114 (68%), Positives = 101/114 (88%)
 Frame = +3

Query: 27  NFSKLNTKKLYSDIYVINGYKWRVLIYPKGNGVNFLSVYLDVADSTSLSQGWSIFADYGL 206
           NF++LNTKKLYS+++V+  YKWRVLI+PKGN V++LS+YLDVADSTSL  GWS +A + L
Sbjct: 53  NFTRLNTKKLYSEVFVVGAYKWRVLIFPKGNNVDYLSMYLDVADSTSLPYGWSRYAQFSL 112

Query: 207 SVVNQRNRRYTVRKDTKHQFNARESDWGFTSFISLGELRDPGKGFLLNDTLIVE 368
           ++VNQ + ++TVRKDT+HQFNARESDWGFTSF+ LGEL DP +G+L+NDTLI+E
Sbjct: 113 AIVNQIHNKFTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIE 166



 Score =  125 bits (314), Expect = 9e-27
 Identities = 58/95 (61%), Positives = 72/95 (75%)
 Frame = +1

Query: 454 SGTTQNHLAVDLPSSTFAWTIRNFSRLNIKKHYSESFQVGGYKWRVLIYPKGNNVDYLSM 633
           + T ++    D P + F W I NF+RLN KK YSE F VG YKWRVLI+PKGNNVDYLSM
Sbjct: 31  ANTVESQPVPDPPQTRFTWRIDNFTRLNTKKLYSEVFVVGAYKWRVLIFPKGNNVDYLSM 90

Query: 634 YLDVAHAPDLPCGWSTNAQFSLSVVNQVYSKYTVQ 738
           YLDVA +  LP GWS  AQFSL++VNQ+++K+TV+
Sbjct: 91  YLDVADSTSLPYGWSRYAQFSLAIVNQIHNKFTVR 125


Top