BLASTX nr result

ID: Coptis23_contig00009144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009144
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509538.1| conserved hypothetical protein [Ricinus comm...   151   2e-34
ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|2...   151   3e-34
ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210...   150   4e-34
ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210...   132   2e-28
emb|CAN62725.1| hypothetical protein VITISV_031003 [Vitis vinifera]   126   8e-27

>ref|XP_002509538.1| conserved hypothetical protein [Ricinus communis]
           gi|223549437|gb|EEF50925.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  151 bits (382), Expect = 2e-34
 Identities = 99/235 (42%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
 Frame = -2

Query: 971 MGSCASVYK--KEDA--------AKNDKPINGECPXXXXXXXXXXXSPMLPQTGFRDFCS 822
           MGSCASV+K   E A        +K D  +  E P               P   F D  S
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKDKHVNDHT-----PIKTFDDHGS 55

Query: 821 KEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHRSSFLGTPQLNKPIFMG 642
           K+E FFDS+AWL+SDC+DDF SVNGDF      TPSRGNTP H +  +GTP++NK    G
Sbjct: 56  KDETFFDSRAWLDSDCEDDFFSVNGDF------TPSRGNTPVHHNFSMGTPKINKTTLEG 109

Query: 641 --IAENMKPEFSPTGKKKKLSDLFRESFQVDED------SGDRNTDDGTLEVKPTKLGIQ 486
                   PE SPTG KK+LS+LFRES + +++      S  +N  +G  EVK T L + 
Sbjct: 110 RPPTPGSIPEPSPTG-KKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVL 168

Query: 485 SNASHESPYTSGANSDSNSKKTPSRDSISEVKSSRTGHQCCLPSLVPSRRSSEKK 321
             ++  +PY SGANS  +S++T + D++ E + S    QCCLPSL+  R  S++K
Sbjct: 169 PKSASGTPYISGANSVCSSERTANGDALIEREKSIKSAQCCLPSLISCRSFSDRK 223


>ref|XP_002298614.1| predicted protein [Populus trichocarpa] gi|222845872|gb|EEE83419.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  151 bits (381), Expect = 3e-34
 Identities = 83/177 (46%), Positives = 111/177 (62%), Gaps = 8/177 (4%)
 Frame = -2

Query: 827 CSKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHRSSFLGTPQLNKPIF 648
           CSKEE FFDS+AWL+SDC+DDF SVNGDF      TPSRGNTP H +   GTPQ NK   
Sbjct: 151 CSKEETFFDSRAWLDSDCEDDFYSVNGDF------TPSRGNTPVHHNFSAGTPQANKNPL 204

Query: 647 MGIAENMKPEFSPTGKKKKLSDLFRESFQVDED--------SGDRNTDDGTLEVKPTKLG 492
            G     + E SPTG KK+LS+LF++  + D D        SGD+N  +G +EVK T L 
Sbjct: 205 EGRPPGSELEPSPTG-KKRLSELFKDRIREDRDVDDLQTSGSGDQNIANGKMEVKQTILD 263

Query: 491 IQSNASHESPYTSGANSDSNSKKTPSRDSISEVKSSRTGHQCCLPSLVPSRRSSEKK 321
           +   +++ +PY SG NS  +S++T + D++ E + S     CC+PSL+  R  SE+K
Sbjct: 264 VLPKSANATPYLSGTNSVCSSERTANGDALIEKEKSFKSSPCCIPSLIFCRSFSERK 320


>ref|XP_002262897.1| PREDICTED: uncharacterized protein At3g27210-like [Vitis vinifera]
          Length = 247

 Score =  150 bits (380), Expect = 4e-34
 Identities = 103/241 (42%), Positives = 126/241 (52%), Gaps = 24/241 (9%)
 Frame = -2

Query: 971 MGSCASVYKKEDAA---------KNDK-----PINGEC----PXXXXXXXXXXXSPMLPQ 846
           MGSC SV++   +A         K DK     PI        P           SP  P 
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 845 TGFRDFCSKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHRSSFLGTPQ 666
           T FRDF SKEEIFFDSQ WLESD  DDF SVNGDF      TPSRGNTP H +  +GTP 
Sbjct: 61  TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDF------TPSRGNTPVHPNVSIGTPH 113

Query: 665 LNKPIFMGIAENMKPEFSPTGKKKKLSDLFRESFQVDEDSGD------RNTDDGTLEVKP 504
            NK  F        P  SPTG+KKKL++LF ES + D D  D      +N  +G +EVK 
Sbjct: 114 ANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKR 173

Query: 503 TKLGIQSNASHESPYTSGANSDSNSKKTPSRDSISEVKSSRTGHQCCLPSLVPSRRSSEK 324
           T L     +++ +P  SG NS  +  +TP+ D  SE +      QCCLPSL  +R  +E+
Sbjct: 174 TILDFPPESANGTPLASGPNSVCSGGRTPNGDFKSEKEKPLRSTQCCLPSLRLNRSFNER 233

Query: 323 K 321
           K
Sbjct: 234 K 234


>ref|XP_004145674.1| PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus]
          Length = 219

 Score =  132 bits (331), Expect = 2e-28
 Identities = 91/219 (41%), Positives = 118/219 (53%), Gaps = 12/219 (5%)
 Frame = -2

Query: 971 MGSCASVYKKEDAAKN------DKPINGECPXXXXXXXXXXXSPML---PQTGFRDFCSK 819
           MGSCAS+++  D+A         K  + E P           +P +    QT      SK
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPINPTVFLKSQTSPSHLGSK 60

Query: 818 EEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHRSSFLGTPQLNKPIFMGI 639
           +E FFDS+ WL+SDC+DDF SVNGDF      TPSRGNTP H S   GTP++N+    GI
Sbjct: 61  DEAFFDSRGWLDSDCEDDFYSVNGDF------TPSRGNTPVHSSFSSGTPRINQ--VHGI 112

Query: 638 AENMK---PEFSPTGKKKKLSDLFRESFQVDEDSGDRNTDDGTLEVKPTKLGIQSNASHE 468
            +      PE SPTG KK+L++LFRES         RN  D   +    +L +QSN   E
Sbjct: 113 DDQTPITIPEPSPTG-KKRLAELFRES--------SRNGTDRQAKPTLNELALQSNP--E 161

Query: 467 SPYTSGANSDSNSKKTPSRDSISEVKSSRTGHQCCLPSL 351
           +PY SG NS  +S++TP+ D   E +      QCCLPSL
Sbjct: 162 TPYISGTNSVCSSERTPNGDVWGEKERPFGSVQCCLPSL 200


>emb|CAN62725.1| hypothetical protein VITISV_031003 [Vitis vinifera]
          Length = 196

 Score =  126 bits (317), Expect = 8e-27
 Identities = 88/201 (43%), Positives = 104/201 (51%), Gaps = 24/201 (11%)
 Frame = -2

Query: 971 MGSCASVYKKEDAA---------KNDK-----PINGEC----PXXXXXXXXXXXSPMLPQ 846
           MGSC SV++   +A         K DK     PI        P           SP  P 
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIPSPIKDHPSIAEPPIGGLSHKAQWSPSQPI 60

Query: 845 TGFRDFCSKEEIFFDSQAWLESDCDDDFLSVNGDFIPSCGNTPSRGNTPNHRSSFLGTPQ 666
           T FRDF SKEEIFFDSQ WLESD  DDF SVNGDF      TPSRGNTP H +  +GTP 
Sbjct: 61  TPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDF------TPSRGNTPVHPNVSIGTPH 113

Query: 665 LNKPIFMGIAENMKPEFSPTGKKKKLSDLFRESFQVDEDSGD------RNTDDGTLEVKP 504
            NK  F        P  SPTG+KKKL++LF ES + D D  D      +N  +G +EVK 
Sbjct: 114 ANKAPFENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKR 173

Query: 503 TKLGIQSNASHESPYTSGANS 441
           T L     +++ +P  SG NS
Sbjct: 174 TILDFPPESANGTPLASGPNS 194


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