BLASTX nr result
ID: Coptis23_contig00009124
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00009124 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera] 72 5e-11 emb|CAN82960.1| hypothetical protein VITISV_004472 [Vitis vinifera] 60 2e-07 emb|CAN69193.1| hypothetical protein VITISV_014653 [Vitis vinifera] 60 2e-07 ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2... 49 4e-07 emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera] 58 9e-07 >emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera] Length = 611 Score = 72.0 bits (175), Expect = 5e-11 Identities = 33/50 (66%), Positives = 37/50 (74%) Frame = +3 Query: 312 WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQLKAEPLPEPY 461 W H IF T C +GGKLCN II GS +NLVSQEMVDKL+LK E P+PY Sbjct: 252 WLHKNIFRTSCTSGGKLCNFIIDGGSSENLVSQEMVDKLKLKMEKHPQPY 301 >emb|CAN82960.1| hypothetical protein VITISV_004472 [Vitis vinifera] Length = 437 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 11/70 (15%) Frame = +3 Query: 285 GYFFYLKPF-----------WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQ 431 GY F+++P WR +IF+TR G+LC +II GS NL S+E+V+KL Sbjct: 4 GYNFFMQPLVNIPRLXEEEDWRRTSIFQTRVACQGRLCTLIIDGGSCSNLASEELVEKLN 63 Query: 432 LKAEPLPEPY 461 LK E P PY Sbjct: 64 LKTEDHPNPY 73 >emb|CAN69193.1| hypothetical protein VITISV_014653 [Vitis vinifera] Length = 357 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 11/70 (15%) Frame = +3 Query: 285 GYFFYLKPF-----------WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQ 431 GY F+++P WR +IF+TR G+LC +II GS NL S+E+V+KL Sbjct: 4 GYNFFMQPLVNIPRLNEEEDWRRTSIFQTRVACQGRLCTLIIDGGSCSNLASEELVEKLN 63 Query: 432 LKAEPLPEPY 461 LK E P PY Sbjct: 64 LKTEDHPNPY 73 >ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1| predicted protein [Populus trichocarpa] Length = 442 Score = 49.3 bits (116), Expect(2) = 4e-07 Identities = 20/49 (40%), Positives = 30/49 (61%) Frame = +3 Query: 312 WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQLKAEPLPEP 458 W +F++ C GK+C I+ SGS +N+VS+E+V KL + E P P Sbjct: 394 WLRTNVFQSTCTISGKICRFIVDSGSCENIVSEEVVRKLHMATESHPRP 442 Score = 29.6 bits (65), Expect(2) = 4e-07 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +1 Query: 70 VSVPRSSFKATCFECGKVRHKKSDCP*LNRVALVHDDHSEMGATQLPHSMTQPVVVTPP- 246 V+ P + F+ CF CG++ H+ ++C R L D E+ Q +PV Sbjct: 313 VTTPNTGFR--CFNCGELGHRFAECKKGQRRGL-FSDVEEINREQEGDVEAEPVYDEEER 369 Query: 247 ---DFGVPALMIRRS 282 D G P LMIRRS Sbjct: 370 LEGDAG-PMLMIRRS 383 >emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera] Length = 898 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/46 (58%), Positives = 35/46 (76%) Frame = +3 Query: 324 TIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQLKAEPLPEPY 461 TIF+T C + GK+CNVII SGS N+V++EMV KL L +PL +PY Sbjct: 477 TIFQTSCTSHGKVCNVIIDSGSCTNVVAKEMVTKLNLTIKPLLQPY 522