BLASTX nr result

ID: Coptis23_contig00009124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009124
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]    72   5e-11
emb|CAN82960.1| hypothetical protein VITISV_004472 [Vitis vinifera]    60   2e-07
emb|CAN69193.1| hypothetical protein VITISV_014653 [Vitis vinifera]    60   2e-07
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    49   4e-07
emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera]    58   9e-07

>emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]
          Length = 611

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/50 (66%), Positives = 37/50 (74%)
 Frame = +3

Query: 312 WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQLKAEPLPEPY 461
           W H  IF T C +GGKLCN II  GS +NLVSQEMVDKL+LK E  P+PY
Sbjct: 252 WLHKNIFRTSCTSGGKLCNFIIDGGSSENLVSQEMVDKLKLKMEKHPQPY 301


>emb|CAN82960.1| hypothetical protein VITISV_004472 [Vitis vinifera]
          Length = 437

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 11/70 (15%)
 Frame = +3

Query: 285 GYFFYLKPF-----------WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQ 431
           GY F+++P            WR  +IF+TR    G+LC +II  GS  NL S+E+V+KL 
Sbjct: 4   GYNFFMQPLVNIPRLXEEEDWRRTSIFQTRVACQGRLCTLIIDGGSCSNLASEELVEKLN 63

Query: 432 LKAEPLPEPY 461
           LK E  P PY
Sbjct: 64  LKTEDHPNPY 73


>emb|CAN69193.1| hypothetical protein VITISV_014653 [Vitis vinifera]
          Length = 357

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 11/70 (15%)
 Frame = +3

Query: 285 GYFFYLKPF-----------WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQ 431
           GY F+++P            WR  +IF+TR    G+LC +II  GS  NL S+E+V+KL 
Sbjct: 4   GYNFFMQPLVNIPRLNEEEDWRRTSIFQTRVACQGRLCTLIIDGGSCSNLASEELVEKLN 63

Query: 432 LKAEPLPEPY 461
           LK E  P PY
Sbjct: 64  LKTEDHPNPY 73


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 49.3 bits (116), Expect(2) = 4e-07
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = +3

Query: 312 WRHFTIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQLKAEPLPEP 458
           W    +F++ C   GK+C  I+ SGS +N+VS+E+V KL +  E  P P
Sbjct: 394 WLRTNVFQSTCTISGKICRFIVDSGSCENIVSEEVVRKLHMATESHPRP 442



 Score = 29.6 bits (65), Expect(2) = 4e-07
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 70  VSVPRSSFKATCFECGKVRHKKSDCP*LNRVALVHDDHSEMGATQLPHSMTQPVVVTPP- 246
           V+ P + F+  CF CG++ H+ ++C    R  L   D  E+   Q      +PV      
Sbjct: 313 VTTPNTGFR--CFNCGELGHRFAECKKGQRRGL-FSDVEEINREQEGDVEAEPVYDEEER 369

Query: 247 ---DFGVPALMIRRS 282
              D G P LMIRRS
Sbjct: 370 LEGDAG-PMLMIRRS 383


>emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera]
          Length = 898

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 TIFETRCITGGKLCNVIIHSGSRDNLVSQEMVDKLQLKAEPLPEPY 461
           TIF+T C + GK+CNVII SGS  N+V++EMV KL L  +PL +PY
Sbjct: 477 TIFQTSCTSHGKVCNVIIDSGSCTNVVAKEMVTKLNLTIKPLLQPY 522


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