BLASTX nr result

ID: Coptis23_contig00009108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009108
         (2049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05987.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   9e-11
emb|CBI18959.3| unnamed protein product [Vitis vinifera]               74   1e-10
ref|XP_003566221.1| PREDICTED: uncharacterized protein LOC100829...    72   6e-10
gb|AFW87038.1| hypothetical protein ZEAMMB73_510722 [Zea mays] g...    69   4e-09
ref|XP_003568422.1| PREDICTED: uncharacterized protein LOC100825...    69   4e-09

>dbj|BAK05987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score = 74.7 bits (182), Expect = 9e-11
 Identities = 64/214 (29%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
 Frame = -2

Query: 911 EDISRSDESYRNFLDHLWVKGYSMSYEYEDGI-VKYEPESGMVTDSEESEDRVMP----- 750
           ++ S  DESY  FL  L +K   M  E E G+ V YE E       +E    VM      
Sbjct: 124 KNTSEVDESYAEFLSLLKIKDGFMVLELEPGVTVVYEQEEETPPGYDELRTLVMSERGID 183

Query: 749 -------YSKTTKFTSRTNPTTCEI-----AMSDDDSDSVQILGDTNTKFDEQTKIRXXX 606
                  YS+    T       C       A  D +   + +     + FDE+       
Sbjct: 184 GPAPDNLYSQDLICTDEHGRVPCTESSDFNACEDCEEAPLALSCGAPSTFDEKLD----- 238

Query: 605 XXXXXKPVDDKEFTEKLEAARLHKPLERIKQMRGRSVTYQTDKMCKSYLDLHPDLAELLR 426
                +P D  E+ E    A   KP+ R++Q+R  S  Y T  +  SYLD +PDLA+ + 
Sbjct: 239 -SVLSRPYDQNEYEELTRKATDQKPVSRLRQLRSGSKRYATGFVGLSYLDHYPDLAKQID 297

Query: 425 AAERKFDRKRALALLRCLFFYYENVSHRGSFVPW 324
            A+     +R L LLR  FF+ EN+ H G+ +PW
Sbjct: 298 TAD---TNERRLNLLRKFFFWLENLCHDGAHMPW 328


>emb|CBI18959.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
 Frame = -2

Query: 893 DESYRNFLDHLWVKGYSMSYEYEDGI-VKYEPESGMVTDSEESEDRVMPYSKTTKFTSRT 717
           DESY+ FL+ +   G  + +  + G  VKYE +     +  ESE  ++        T + 
Sbjct: 55  DESYKTFLECIKEDGKYLVFVNKHGKRVKYEED-----EESESESEILAADSDPCITPKL 109

Query: 716 NPTTCEIAMSDDDSDSVQILGDTNTKFDEQTKIRXXXXXXXXKPVDDKEFTEKLEAARLH 537
                         DS +I     T     ++ R        KP D  E+ E L+     
Sbjct: 110 -------------FDSSRIKNRNRTG---HSQFRDNLMVILKKPYDQLEYEELLQEIIQR 153

Query: 536 KPLERIKQMRGRSVTYQTDKMCKSYLDLHPDLAELLRAAERKFDRKRALALLRCLFFYYE 357
           KPLER + +RGR  +Y  +   KSYLD H DL   + A +   D  + L LLR  F++ +
Sbjct: 154 KPLERHRDLRGRIKSYSVEICSKSYLDHHTDLKRKIDAVQG--DHCKILNLLRGFFYWLK 211

Query: 356 NVSHRGSFVPW 324
           N+SH G+F PW
Sbjct: 212 NLSHEGAFQPW 222


>ref|XP_003566221.1| PREDICTED: uncharacterized protein LOC100829478 [Brachypodium
           distachyon]
          Length = 349

 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = -2

Query: 806 EPESGMVTDS---EESEDRVMPYSKTTKFTSRTNPTTCEIAMSDDDSDSVQILGDTNTKF 636
           E E  + TD    E++++R    SK + +     P  CE    DD    + +     + F
Sbjct: 190 EEEDEVRTDEDRLEQTDNRHNVISKESHY-----PEACE----DDQGAPLGLPSGVTSTF 240

Query: 635 DEQTKIRXXXXXXXXKPVDDKEFTEKLEAARLHKPLERIKQMRGRSVTYQTDKMCKSYLD 456
           DEQ            +P D  EF E L  A   KP+ R + +R  S  Y T ++  SYLD
Sbjct: 241 DEQLD------SFLSRPYDRNEFQELLRKATFRKPVTRQRHLRNASKFYATGELGLSYLD 294

Query: 455 LHPDLAELLRAAERKFDRKRALALLRCLFFYYENVSHRGSFVPWRTPAP 309
            +PDLA  + +A+     +R L LLR  FF+ +N++  G+++PW   AP
Sbjct: 295 EYPDLATQIDSADCD---ERRLNLLRKFFFWLQNLTQEGAYMPWIPKAP 340


>gb|AFW87038.1| hypothetical protein ZEAMMB73_510722 [Zea mays]
           gi|413954390|gb|AFW87039.1| hypothetical protein
           ZEAMMB73_510722 [Zea mays]
          Length = 376

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 40/124 (32%), Positives = 65/124 (52%)
 Frame = -2

Query: 695 AMSDDDSDSVQILGDTNTKFDEQTKIRXXXXXXXXKPVDDKEFTEKLEAARLHKPLERIK 516
           A  D+ +  + I    ++ FDE+            +P D  E+ E    A   KP+ R +
Sbjct: 249 ACEDEQATPLAISYGGSSTFDEKLNA------VLSQPYDQNEYEELWRKATDRKPVSRQR 302

Query: 515 QMRGRSVTYQTDKMCKSYLDLHPDLAELLRAAERKFDRKRALALLRCLFFYYENVSHRGS 336
            +R  S  Y T+ +  SYLD +PDLA  ++++    DR + L+LLR  FF+ EN+ H G+
Sbjct: 303 HLRSASKRYVTEAIGLSYLDYYPDLAVQIKSS----DRDKRLSLLRRFFFWLENLCHEGA 358

Query: 335 FVPW 324
           ++PW
Sbjct: 359 YMPW 362


>ref|XP_003568422.1| PREDICTED: uncharacterized protein LOC100825411 [Brachypodium
           distachyon]
          Length = 330

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 61/215 (28%), Positives = 89/215 (41%), Gaps = 22/215 (10%)
 Frame = -2

Query: 902 SRSDESYRNFLDHLWVKGYSMSYEYEDGIVKYEPESGMVTDSEESEDRVMPYSKTTKFTS 723
           S  DESY  FL    +    M  E E G+        +V   EE         +T   T 
Sbjct: 112 SEIDESYAKFLSLTKIVDGFMVTEIEPGVT-------IVYGQEEETPAGYDELRTASSTK 164

Query: 722 RTNPTTCEI-AMSDDDSDSVQIL----------GDTNTKFDEQ-----------TKIRXX 609
              P T  + +M D+D D +              D N   D+Q           +     
Sbjct: 165 ERVPLTTVLESMEDEDEDLICTCEHELVPHTEYSDFNACEDDQGAALVLPSGITSTFDEK 224

Query: 608 XXXXXXKPVDDKEFTEKLEAARLHKPLERIKQMRGRSVTYQTDKMCKSYLDLHPDLAELL 429
                 +P D KEF E L  A +  P+ R + +R  S +Y T+    SYLD +PDLA  +
Sbjct: 225 LDSFLSRPYDRKEFEELLRKATVRMPVTRQRHLRNASKSYATEVPGLSYLDEYPDLATQI 284

Query: 428 RAAERKFDRKRALALLRCLFFYYENVSHRGSFVPW 324
            +A+     +R L LLR  FF+ +N++H G+ +PW
Sbjct: 285 GSADCD---ERRLNLLRKFFFWLQNLTHEGAHMPW 316


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