BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009103
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18781.1| class S F-box protein [Nicotiana alata]                 78   1e-12
dbj|BAJ24860.1| S-locus linked F-box protein type-3 [Petunia x h...    76   4e-12
dbj|BAJ24859.1| S-locus linked F-box protein type-3 [Petunia x h...    76   4e-12
dbj|BAJ24862.1| S-locus linked F-box protein type-3 [Petunia axi...    75   5e-12
dbj|BAJ24858.1| S-locus linked F-box protein type-3 [Petunia x h...    75   5e-12

>gb|ABR18781.1| class S F-box protein [Nicotiana alata]
          Length = 381

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 61/184 (33%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
 Frame = -1

Query: 560 YSLSTDSWRPIDTVVPFPHVYSHPKAP-LRNGIYCWLGDESDRHTILSFDFTTEVFKTMT 384
           Y LS DSWR +D+    P +Y  P A       + W G       IL FD +TE+F+ M 
Sbjct: 197 YDLSIDSWRELDSE-QLPLIYWVPCAETFYKEAFHWFGTIDLSMVILCFDVSTEIFRNMK 255

Query: 383 VPDDYGVGYHGYLKLALLRENIACIEWVFYSNNPYIWHC----KIWVLNEYDVMESWTKL 216
           +P  +      Y  L +L E++  I    Y N   I H     +IWV+ EY V ESW   
Sbjct: 256 MPRTFIFDNAQYPGLVILSESLTLI---CYPNPISIDHIQEVTRIWVMKEYGVSESWILK 312

Query: 215 NTIELELFAYPCAFLMNGKIIGYGSNGGNLCFYDLVVQELKYFPLDPVSFITEVVVYNAT 36
           +TI L    YP     N  ++ + S  G L  Y+L   E+K   L+       V VY  +
Sbjct: 313 DTIRLPPIEYPLDIWKNNLLL-FQSKSGLLISYNLKSDEVKELKLNGFPGSMSVKVYKES 371

Query: 35  LVSI 24
           L SI
Sbjct: 372 LTSI 375


>dbj|BAJ24860.1| S-locus linked F-box protein type-3 [Petunia x hybrida]
          Length = 385

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
 Frame = -1

Query: 560 YSLSTDSWRPIDTV---VPFPHVYSHPKAPLRNGIYCWLGDESDRHTILSFDFTTEVFKT 390
           Y+ STDSWR +D V   +P+P+ +++ +     G + W   ++    IL FD  TE F+T
Sbjct: 195 YNSSTDSWRELDCVDQELPWPYNFAYSEI-FYEGAFHWYAHKNVV-LILCFDINTETFRT 252

Query: 389 MTVPDDYGVGYHGYLKLALLRE--NIACIEWVFYSNNPYIWHCKIWVLNEYDVMESWTKL 216
           M VP+           L +L E   + C       ++P     +IW + EY V ESW K 
Sbjct: 253 MEVPEPCASYDEKCHSLLVLDEFLTLFCYPDPRRESSPIQETIEIWTMQEYRVNESWIKK 312

Query: 215 NTIELELFAYPCAFLMNGKIIGYGSNGGNLCFYDLVVQELKYFPLDPVSFITEVVVYNAT 36
           +TI+      P A +   +++ +    G L  YDL   E+K F LD       V++Y  +
Sbjct: 313 HTIKSPPIESPLA-IWKDRLLLFQDKSGILISYDLNSDEVKEFKLDGYPATLRVIIYKES 371

Query: 35  LVSI 24
           L  I
Sbjct: 372 LTPI 375


>dbj|BAJ24859.1| S-locus linked F-box protein type-3 [Petunia x hybrida]
          Length = 388

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
 Frame = -1

Query: 560 YSLSTDSWRPIDTV-VPFPHVYSHPKAPL-RNGIYCWLGDESDRHTILSFDFTTEVFKTM 387
           Y+ STDSWR +  V    P  Y HP + +   G + W   +     +L FD  TE+F+TM
Sbjct: 198 YNSSTDSWRQLANVDQELPGPYMHPYSEMFYKGTFHWYA-QGQMRLLLCFDINTEIFRTM 256

Query: 386 TVPDDYGVGYHGYLKLALLRENIACIEWVFY-----SNNPYIWHCKIWVLNEYDVMESWT 222
            VP    V       L +  E   C+ ++ Y      ++P     +IW++ EY V ESW 
Sbjct: 257 QVPSTCAVRDEKCHSLVVFGE---CLTFICYPDPRRESSPMQETIEIWIMQEYSVNESWI 313

Query: 221 KLNTIELELFAYPCAFLMNGKIIGYGSNGGNLCFYDLVVQELKYFPLDPVSFITEVVVYN 42
           K  TI       P A +   +++      G L  YDL + E+K F L        V+VY 
Sbjct: 314 KKYTIRPPPIESPLA-IWKDRLLLLQDKSGVLIAYDLNLDEVKEFKLHGHPESLRVIVYK 372

Query: 41  ATLVSI 24
            +L  I
Sbjct: 373 ESLTPI 378


>dbj|BAJ24862.1| S-locus linked F-box protein type-3 [Petunia axillaris subsp.
           axillaris]
          Length = 385

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
 Frame = -1

Query: 560 YSLSTDSWRPIDTV---VPFPHVYSHPKAPLRNGIYCWLGDESDRHTILSFDFTTEVFKT 390
           Y+ STDSWR +D V   +P+P+ +++ +     G + W   ++    IL FD  TE F+T
Sbjct: 195 YNSSTDSWRELDCVDQELPWPYNFAYSEI-FYEGAFHWYAHKNVV-LILCFDVNTETFRT 252

Query: 389 MTVPDDYGVGYHGYLKLALLRE--NIACIEWVFYSNNPYIWHCKIWVLNEYDVMESWTKL 216
           M VP+           L +L E   + C       ++P     +IW + EY V ESW K 
Sbjct: 253 MEVPEPCASYDEKCHSLLVLDEFLTLFCYPDPRRESSPIQETIEIWTMQEYRVNESWIKK 312

Query: 215 NTIELELFAYPCAFLMNGKIIGYGSNGGNLCFYDLVVQELKYFPLDPVSFITEVVVYNAT 36
           +TI+      P A +   +++ +    G L  YDL   E+K F LD       V++Y  +
Sbjct: 313 HTIKSPPIESPLA-IWKDRLLLFQDKSGILISYDLNSDEVKEFKLDGYPATLRVIIYKES 371

Query: 35  LVSI 24
           L  I
Sbjct: 372 LTPI 375


>dbj|BAJ24858.1| S-locus linked F-box protein type-3 [Petunia x hybrida]
          Length = 385

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
 Frame = -1

Query: 560 YSLSTDSWRPIDTV---VPFPHVYSHPKAPLRNGIYCWLGDESDRHTILSFDFTTEVFKT 390
           Y+ STDSWR +D V   +P+P+ +++ +     G + W   ++    IL FD  TE F+T
Sbjct: 195 YNSSTDSWRELDCVDQELPWPYNFAYSEI-FYEGAFHWYAHKNVV-LILCFDVNTETFRT 252

Query: 389 MTVPDDYGVGYHGYLKLALLRE--NIACIEWVFYSNNPYIWHCKIWVLNEYDVMESWTKL 216
           M VP+           L +L E   + C       ++P     +IW + EY V ESW K 
Sbjct: 253 MEVPEPCASYDEKCHSLLVLDEFLTLFCYPDPRRESSPIQETIEIWTMQEYRVNESWIKK 312

Query: 215 NTIELELFAYPCAFLMNGKIIGYGSNGGNLCFYDLVVQELKYFPLDPVSFITEVVVYNAT 36
           +TI+      P A +   +++ +    G L  YDL   E+K F LD       V++Y  +
Sbjct: 313 HTIKSPPIESPLA-IWKDRLLLFQDKSGILISYDLNSDEVKEFKLDGYPATLRVIIYKES 371

Query: 35  LVSI 24
           L  I
Sbjct: 372 LTPI 375