BLASTX nr result
ID: Coptis23_contig00009086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00009086 (2502 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20795.3| unnamed protein product [Vitis vinifera] 363 1e-97 ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 363 1e-97 ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-... 363 2e-97 ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 358 3e-96 sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related prot... 357 9e-96 >emb|CBI20795.3| unnamed protein product [Vitis vinifera] Length = 1006 Score = 363 bits (932), Expect = 1e-97 Identities = 214/444 (48%), Positives = 282/444 (63%), Gaps = 32/444 (7%) Frame = +3 Query: 465 IYYKFLEAILTS------LELGSPLLTNEEFHRSLLACSAELVLIDSGLYSTLLFPMVLK 626 +YY+ LEA+ T+ + LLTNE FHR +LACSAELVL T+LFP VL+ Sbjct: 491 LYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELVLATHKTV-TMLFPAVLE 549 Query: 627 RCGITAFDVCKVIESFVKHKELLPGDLVLHLFALQERLFECLIWEKGSSMYNSLIVARPD 806 R GITAFD+ KVIESF++H+E LP +L HL +L+ERL E ++WEKGSSMYNSLIVAR Sbjct: 550 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVARAA 609 Query: 807 LSEEINRLGLLAEPIPSLDEILMHSN-SFEKLVHLRSFRKSNIPALLGSDQNGDVMTQ-- 977 LS E+NRLGLLAEP+PSLD I MH N S L + S +K QNGD+ + Sbjct: 610 LSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRES----SPGQNGDIRSPKR 665 Query: 978 -WPAYES-------FTT-YEDRLFDYSSFESKTPPPPLHTAFASPECPNPGRKRETCAEA 1130 P Y S FT+ +DR ++ +SK PPPPL +AFASP PNPGR+ ETCAE Sbjct: 666 VCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGETCAET 725 Query: 1131 VINVFFSKVLELAAQKISVLAAVLEVTQQIEEAVCCLVQHILRRQTALFFNRHIDQIILC 1310 IN+FFSK+++LAA +I+ + L+++QQ+ E V CL Q IL R+T+LFFNRHIDQIILC Sbjct: 726 GINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILC 785 Query: 1311 SFFGVAQFSKLNLTIQEIFQSYVGQPRCKSQVYRSIFVDWSPTCHNGKTGQEYVGLTTFY 1490 F+G+A+ S++NLT +EI +Y QP+CK Q++RS+FVDWS NGKTG+E+V + TFY Sbjct: 786 CFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVDIITFY 845 Query: 1491 IEIYFPSVRSILIQLVRTGXXXXXXXXXXXXXXXXXNMI--------------ANKDKVS 1628 EI+ P+V+ +L+++ G + KVS Sbjct: 846 NEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFPSLPDMSPKKVS 905 Query: 1629 SADKVDLSPTESSKILELADALIS 1700 +A V +SP SSK+ DALIS Sbjct: 906 AAHNVYVSPLRSSKM----DALIS 925 Score = 144 bits (364), Expect = 9e-32 Identities = 75/152 (49%), Positives = 100/152 (65%), Gaps = 3/152 (1%) Frame = +3 Query: 1665 SKILELADALISELVERLKLVKHIRKTVYLLVQYILHQRPAFFFNTDLDQIILCSLFSVA 1844 SKI++LA I+ +VERL+L + +R+ VY L Q IL++R + FFN +DQIILC + +A Sbjct: 732 SKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILCCFYGLA 791 Query: 1845 KIFQINLSFKEIVLKYRKQLQCKPQAFRGVFVDLAQPRHDENTGLDHDGICTFYKETFVP 2024 KI Q+NL+F+EI+ YRKQ QCKPQ FR VFVD + R + TG +H I TFY E F+P Sbjct: 792 KISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVDIITFYNEIFIP 851 Query: 2025 TVNPLLKELVP---AASNRKALHEVNTNIDVQ 2111 V PLL E+ P + + EVN N D Q Sbjct: 852 AVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQ 883 >ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera] gi|254789791|sp|A7P514.1|RBR_VITVI RecName: Full=Retinoblastoma-related protein gi|359392418|gb|AEV45768.1| RBR protein [Vitis pseudoreticulata] Length = 1007 Score = 363 bits (932), Expect = 1e-97 Identities = 214/444 (48%), Positives = 282/444 (63%), Gaps = 32/444 (7%) Frame = +3 Query: 465 IYYKFLEAILTS------LELGSPLLTNEEFHRSLLACSAELVLIDSGLYSTLLFPMVLK 626 +YY+ LEA+ T+ + LLTNE FHR +LACSAELVL T+LFP VL+ Sbjct: 492 LYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELVLATHKTV-TMLFPAVLE 550 Query: 627 RCGITAFDVCKVIESFVKHKELLPGDLVLHLFALQERLFECLIWEKGSSMYNSLIVARPD 806 R GITAFD+ KVIESF++H+E LP +L HL +L+ERL E ++WEKGSSMYNSLIVAR Sbjct: 551 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVARAA 610 Query: 807 LSEEINRLGLLAEPIPSLDEILMHSN-SFEKLVHLRSFRKSNIPALLGSDQNGDVMTQ-- 977 LS E+NRLGLLAEP+PSLD I MH N S L + S +K QNGD+ + Sbjct: 611 LSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRES----SPGQNGDIRSPKR 666 Query: 978 -WPAYES-------FTT-YEDRLFDYSSFESKTPPPPLHTAFASPECPNPGRKRETCAEA 1130 P Y S FT+ +DR ++ +SK PPPPL +AFASP PNPGR+ ETCAE Sbjct: 667 VCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGETCAET 726 Query: 1131 VINVFFSKVLELAAQKISVLAAVLEVTQQIEEAVCCLVQHILRRQTALFFNRHIDQIILC 1310 IN+FFSK+++LAA +I+ + L+++QQ+ E V CL Q IL R+T+LFFNRHIDQIILC Sbjct: 727 GINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILC 786 Query: 1311 SFFGVAQFSKLNLTIQEIFQSYVGQPRCKSQVYRSIFVDWSPTCHNGKTGQEYVGLTTFY 1490 F+G+A+ S++NLT +EI +Y QP+CK Q++RS+FVDWS NGKTG+E+V + TFY Sbjct: 787 CFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVDIITFY 846 Query: 1491 IEIYFPSVRSILIQLVRTGXXXXXXXXXXXXXXXXXNMI--------------ANKDKVS 1628 EI+ P+V+ +L+++ G + KVS Sbjct: 847 NEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPFPSLPDMSPKKVS 906 Query: 1629 SADKVDLSPTESSKILELADALIS 1700 +A V +SP SSK+ DALIS Sbjct: 907 AAHNVYVSPLRSSKM----DALIS 926 Score = 144 bits (364), Expect = 9e-32 Identities = 75/152 (49%), Positives = 100/152 (65%), Gaps = 3/152 (1%) Frame = +3 Query: 1665 SKILELADALISELVERLKLVKHIRKTVYLLVQYILHQRPAFFFNTDLDQIILCSLFSVA 1844 SKI++LA I+ +VERL+L + +R+ VY L Q IL++R + FFN +DQIILC + +A Sbjct: 733 SKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILCCFYGLA 792 Query: 1845 KIFQINLSFKEIVLKYRKQLQCKPQAFRGVFVDLAQPRHDENTGLDHDGICTFYKETFVP 2024 KI Q+NL+F+EI+ YRKQ QCKPQ FR VFVD + R + TG +H I TFY E F+P Sbjct: 793 KISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVDIITFYNEIFIP 852 Query: 2025 TVNPLLKELVP---AASNRKALHEVNTNIDVQ 2111 V PLL E+ P + + EVN N D Q Sbjct: 853 AVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQ 884 >ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max] Length = 1002 Score = 363 bits (931), Expect = 2e-97 Identities = 204/375 (54%), Positives = 260/375 (69%), Gaps = 14/375 (3%) Frame = +3 Query: 465 IYYKFLEA-------ILTSLELGSPLLTNEEFHRSLLACSAELVLIDSGLYSTLLFPMVL 623 +YY+ LEA + + L S LLTNE FHR +LACSAELVL T+LFP VL Sbjct: 493 LYYRVLEAMCRAEAQVFHATNLTS-LLTNERFHRCMLACSAELVLATHKTV-TMLFPAVL 550 Query: 624 KRCGITAFDVCKVIESFVKHKELLPGDLVLHLFALQERLFECLIWEKGSSMYNSLIVARP 803 +R GITAFD+ KVIESF++H+E LP +L HL +L+ERL E ++WEKGSSMYNSL VARP Sbjct: 551 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARP 610 Query: 804 DLSEEINRLGLLAEPIPSLDEILMHSN-SFEKLVHLRSFRKSNIPALLGSD-QNGDVMTQ 977 LS EINRLGLLAEP+PSLDEI MH N S L + + +P L S QNGD+ + Sbjct: 611 SLSAEINRLGLLAEPMPSLDEIAMHINFSCGGLPPVPT-----LPKLESSPTQNGDIRSP 665 Query: 978 ----WPAYESFTT-YEDRLFDYSSFESKTPPPPLHTAFASPECPNPGRKRETCAEAVINV 1142 SFT+ +DRL ++S +SK PPPPL +AFASP PNPG ETCAE IN+ Sbjct: 666 KRNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINI 725 Query: 1143 FFSKVLELAAQKISVLAAVLEVTQQIEEAVCCLVQHILRRQTALFFNRHIDQIILCSFFG 1322 FF K+++L A +IS + L+++QQI E V CL Q IL + T+LFFN HIDQIILC F+G Sbjct: 726 FFGKIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYG 785 Query: 1323 VAQFSKLNLTIQEIFQSYVGQPRCKSQVYRSIFVDWSPTCHNGKTGQEYVGLTTFYIEIY 1502 VA+ S+LNLT +EI +Y QP CK+QV+RS+FVDWS NG+TGQ++V + TFY EI+ Sbjct: 786 VAKISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITFYNEIF 845 Query: 1503 FPSVRSILIQLVRTG 1547 PSV+ +L++L G Sbjct: 846 IPSVKPLLVELGPAG 860 Score = 142 bits (358), Expect = 4e-31 Identities = 78/150 (52%), Positives = 97/150 (64%), Gaps = 2/150 (1%) Frame = +3 Query: 1668 KILELADALISELVERLKLVKHIRKTVYLLVQYILHQRPAFFFNTDLDQIILCSLFSVAK 1847 KI++L IS +VERL+L + IR+ VY L Q IL+Q + FFN +DQIILC + VAK Sbjct: 729 KIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYGVAK 788 Query: 1848 IFQINLSFKEIVLKYRKQLQCKPQAFRGVFVDLAQPRHDENTGLDHDGICTFYKETFVPT 2027 I Q+NL+FKEIV YRKQ CK Q FR VFVD + R + TG DH I TFY E F+P+ Sbjct: 789 ISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITFYNEIFIPS 848 Query: 2028 VNPLLKELVPAASNRKA--LHEVNTNIDVQ 2111 V PLL EL PA K+ + EVN + Q Sbjct: 849 VKPLLVELGPAGPTPKSDRIPEVNNKNEAQ 878 >ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis] gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName: Full=Retinoblastoma-related protein gi|223530511|gb|EEF32393.1| conserved hypothetical protein [Ricinus communis] Length = 1020 Score = 358 bits (920), Expect = 3e-96 Identities = 219/445 (49%), Positives = 282/445 (63%), Gaps = 33/445 (7%) Frame = +3 Query: 465 IYYKFLEA-------ILTSLELGSPLLTNEEFHRSLLACSAELVLIDSGLYSTLLFPMVL 623 +YY+ LEA IL + L S LLTNE FHR +LACSAELVL T+LFP VL Sbjct: 504 LYYRVLEAMCTAEAQILHATNLTS-LLTNERFHRCMLACSAELVLATHKTV-TMLFPAVL 561 Query: 624 KRCGITAFDVCKVIESFVKHKELLPGDLVLHLFALQERLFECLIWEKGSSMYNSLIVARP 803 +R GITAFD+ KVIESF++H+E LP +L HL +L+ERL E ++WEKGSSMYNSL VARP Sbjct: 562 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 621 Query: 804 DLSEEINRLGLLAEPIPSLDEILMHSN-SFEKLVHLRSFRKSNIPALLGSDQNGDVMT-Q 977 LS EINRLGLLAEP+PSLD I +H N S L L S K I QNGD+ + + Sbjct: 622 SLSAEINRLGLLAEPMPSLDAIAVHINFSSGGLPPLSSVSKHEI----SPGQNGDIRSPK 677 Query: 978 WPAYE---------SFTT-YEDRLFDYSSFESKTPPPPLHTAFASPECPNPGRKRETCAE 1127 P + SFT+ +DRL +++ +SK PPPPL +AFASP PNPG ETCAE Sbjct: 678 RPCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRPNPGGGGETCAE 737 Query: 1128 AVINVFFSKVLELAAQKISVLAAVLEVTQQ-IEEAVCCLVQHILRRQTALFFNRHIDQII 1304 IN+FFSK+ +LAA +I+ + L+ +QQ I E V L Q +L +QT+LFFNRHIDQII Sbjct: 738 TGINIFFSKINKLAAVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSLFFNRHIDQII 797 Query: 1305 LCSFFGVAQFSKLNLTIQEIFQSYVGQPRCKSQVYRSIFVDWSPTCHNGKTGQEYVGLTT 1484 LC F+GVA+ SK+NLT +EI +Y QP+CK QV+RS+FVDWS HNG+TGQ++V + T Sbjct: 798 LCCFYGVAKISKVNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHNGRTGQDHVDIIT 857 Query: 1485 FYIEIYFPSVRSILIQLVRTGXXXXXXXXXXXXXXXXXNMIA-------------NKDKV 1625 FY EI+ P+ + +L+++ G A + KV Sbjct: 858 FYNEIFIPAAKPLLVEVGSAGITVKGSQVPEVNNNKDGQCPASPKVSPFPSLPDMSPKKV 917 Query: 1626 SSADKVDLSPTESSKILELADALIS 1700 S+A V +SP +SK+ DALIS Sbjct: 918 SAAHNVYVSPLRTSKM----DALIS 938 Score = 140 bits (353), Expect = 2e-30 Identities = 77/152 (50%), Positives = 98/152 (64%), Gaps = 3/152 (1%) Frame = +3 Query: 1665 SKILELADALISELVERLKLVK-HIRKTVYLLVQYILHQRPAFFFNTDLDQIILCSLFSV 1841 SKI +LA I+ +VERL+ + HIR+ VY L Q +L Q+ + FFN +DQIILC + V Sbjct: 745 SKINKLAAVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSLFFNRHIDQIILCCFYGV 804 Query: 1842 AKIFQINLSFKEIVLKYRKQLQCKPQAFRGVFVDLAQPRHDENTGLDHDGICTFYKETFV 2021 AKI ++NL+F+EI+ YRKQ QCKPQ FR VFVD + RH+ TG DH I TFY E F+ Sbjct: 805 AKISKVNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHNGRTGQDHVDIITFYNEIFI 864 Query: 2022 PTVNPLLKELVPAASNRKA--LHEVNTNIDVQ 2111 P PLL E+ A K + EVN N D Q Sbjct: 865 PAAKPLLVEVGSAGITVKGSQVPEVNNNKDGQ 896 >sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1 gi|51538007|gb|AAU05979.1| retinoblastoma protein [Nicotiana benthamiana] Length = 1003 Score = 357 bits (916), Expect = 9e-96 Identities = 212/438 (48%), Positives = 277/438 (63%), Gaps = 26/438 (5%) Frame = +3 Query: 465 IYYKFLEA-------ILTSLELGSPLLTNEEFHRSLLACSAELVLIDSGLYSTLLFPMVL 623 +YY+ L+ IL L S LLTNE FHR +LACSAELVL T+LFP VL Sbjct: 495 LYYRVLQTMCTAESQILNGNNLTS-LLTNERFHRCMLACSAELVLATHKTV-TMLFPAVL 552 Query: 624 KRCGITAFDVCKVIESFVKHKELLPGDLVLHLFALQERLFECLIWEKGSSMYNSLIVARP 803 +R GITAFD+ KVIESF++H+E LP +L HL +L+ERL E ++WEKGSSMYNSL VA+P Sbjct: 553 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKP 612 Query: 804 DLSEEINRLGLLAEPIPSLDEILMHSN-SFEKLVHLRSFRKSNIPALLGSDQNGDVMTQW 980 L+ EINR+GLLAEP+PSLD I MH N S L L S K+N L + Q GD+ + Sbjct: 613 SLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNN---LAPNGQIGDIRSPK 669 Query: 981 PAYE----------SFTT-YEDRLFDYSSFESKTPPPPLHTAFASPECPNPGRKRETCAE 1127 SFT+ +DR ++ +SK PPP LH+AFASP PNPG ETCAE Sbjct: 670 KVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAE 729 Query: 1128 AVINVFFSKVLELAAQKISVLAAVLEVTQQIEEAVCCLVQHILRRQTALFFNRHIDQIIL 1307 INVFF K+++LAA +I+ + L+++QQI E V CL Q IL ++T+LFFNRHIDQIIL Sbjct: 730 TAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIIL 789 Query: 1308 CSFFGVAQFSKLNLTIQEIFQSYVGQPRCKSQVYRSIFVDWSPTCHNGKTGQEYVGLTTF 1487 CSF+GVA+ S+LNLT +EI +Y QP+CK QV+RS+FVDW+ HN +TG ++V + TF Sbjct: 790 CSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITF 849 Query: 1488 YIEIYFPSVRSILIQLVRTGXXXXXXXXXXXXXXXXXNMI-------ANKDKVSSADKVD 1646 Y E++ PSV+ +L++L G + KVS+ V Sbjct: 850 YNEMFIPSVKPLLVELAPAGNNSEKNDHNDGQGPASPKPSPFPKLPDMSPKKVSAVHNVY 909 Query: 1647 LSPTESSKILELADALIS 1700 +SP +SK+ DALIS Sbjct: 910 VSPLRASKM----DALIS 923 Score = 156 bits (395), Expect = 2e-35 Identities = 78/134 (58%), Positives = 96/134 (71%) Frame = +3 Query: 1668 KILELADALISELVERLKLVKHIRKTVYLLVQYILHQRPAFFFNTDLDQIILCSLFSVAK 1847 KI++LA I+ ++ERL+L + IR+TVY L Q IL QR + FFN +DQIILCS + VAK Sbjct: 738 KIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAK 797 Query: 1848 IFQINLSFKEIVLKYRKQLQCKPQAFRGVFVDLAQPRHDENTGLDHDGICTFYKETFVPT 2027 I Q+NL+FKEI+ YRKQ QCKPQ FR VFVD RH+ TG DH I TFY E F+P+ Sbjct: 798 ISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITFYNEMFIPS 857 Query: 2028 VNPLLKELVPAASN 2069 V PLL EL PA +N Sbjct: 858 VKPLLVELAPAGNN 871