BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009077
         (4416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   887   0.0  
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              848   0.0  
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   823   0.0  
ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal doma...   805   0.0  
ref|XP_003551805.1| PREDICTED: RNA polymerase II C-terminal doma...   789   0.0  

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  887 bits (2292), Expect = 0.0
 Identities = 580/1282 (45%), Positives = 713/1282 (55%), Gaps = 26/1282 (2%)
 Frame = +1

Query: 70   SNYGSGLYNFAWAQAVQNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 249
            S Y   LYN AWAQAVQNK                                         
Sbjct: 70   SGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSSSAKEVAKVIIDDS 129

Query: 250  XXXXXXXXXXXXSEVVELKSEEGEKCLSVKEEEENLSPITD---------EAEFEKRICL 402
                        SE  E + EEGE  L  + + ++   + D         E E  +R+  
Sbjct: 130  GDEMDVKMDDV-SEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVERVKS 188

Query: 403  ILEALDTVTVSDAEKCFGEVCSRLRTALDTLQLI-----VSESGLSVVGGITDQCFVGFE 567
            I E L++VTV +AEK F  VCSRL+  L +LQ +     V ES +     +  Q      
Sbjct: 189  IQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIR 248

Query: 568  DVNSVFNSMNPKEKGQNKQVFTSLLAHMKNQVPSLFSAEQMEEVQAVLHSLDPPPSISSG 747
             +N VF SMN  +K  NK VF+ LL+ ++     +FS + ++EV+ ++  LD P + SS 
Sbjct: 249  ALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSA 308

Query: 748  VKDMEVEREVPVNNDVKSELGILGEKPVKSANELGILGQKPGKDLGILGEKPGQMFNSLK 927
                +V       NDV+          V       IL            E  G+ F S K
Sbjct: 309  EASDKV-------NDVQ----------VTDGMNRNILDSSV--------ESSGRAFASAK 343

Query: 928  VVPLEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDVDSLPSPTREA 1107
             + L+  S +  +QNN       LK GL+S  RGR  FGPLLDLH+DHD DSLPSPT +A
Sbjct: 344  KLSLDSISVESYNQNNP----DALKPGLSSS-RGRFIFGPLLDLHKDHDEDSLPSPTGKA 398

Query: 1108 PPPLHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDALKAVSTYQQKFGRNSFLL 1287
            P      K ++            KVA++ ++D+ +H YETDALKAVSTYQQKFG  SFL 
Sbjct: 399  PQCFPVNKSEL---------VTAKVAHE-TQDSIMHPYETDALKAVSTYQQKFGLTSFLP 448

Query: 1288 SNRLPSPTPXXXXXXXXXXXXXXXXXXPSVGNARAVNPLMPPQAVVSVTEHMDKSGGQGV 1467
             ++LPSPTP                   ++      N       +VS    MD S  QG 
Sbjct: 449  IDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGP 508

Query: 1468 PV-KTMEQIASRPN--SHGRASSKSRDPRLRLANPDGGSLDPNARPL--LKDTPQNEHVA 1632
             V +    ++S P+  S   AS+KSRDPRLRLA+ D GSLD N RPL  + ++P+ + + 
Sbjct: 509  TVGRNTSLVSSGPHLDSSVVASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLG 568

Query: 1633 GVLNSRKNKNDGDIIGDGRTVKKQRNGLGNWEVSRENCSSVGTPVIDRIQSTENRGDPRK 1812
             +++SRK K+  + + DG   K+QRNGL +    R                         
Sbjct: 569  EIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVR------------------------- 603

Query: 1813 GDPRKSVSGGIFSGQRQGSTTGIFNPVTGGPQQLPVTGSTPQSLPSIGTFNPITGGLQNL 1992
             D +  V+ G   G  + S T +   +    Q +  TG+ P+ L S  T   +TG     
Sbjct: 604  -DAQTVVASG---GWLEDSNT-VIPQMMNRNQLIENTGTDPKKLESKVT---VTG----- 650

Query: 1993 PVIGSTPHLLPSIGTFNPIT--GGPQQLPVIG-STTQPLPSLLKDIAVDPALLMQLIMEQ 2163
                        IG   P     G + LPV+  STT  L SLLKDIAV+PA+ M +  + 
Sbjct: 651  ------------IGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK- 697

Query: 2164 QRLQAEAQKCSNLPQSRMPAFSSSFTPGAAPLVTTAQSKSSGVEQKPLEKQQILPSMNLQ 2343
                 E QK  +  ++ +   +S+   G  P  + A  K S + QKP    Q+ P     
Sbjct: 698  ----VEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQV-PQTGPM 752

Query: 2344 GELG-IRMKPRDPRRILHSSTFQTNESFGSTQFKTNGSLTSNSQASKDNISGRQQSQQGD 2520
             E G +RMKPRDPRRILH+++FQ + S GS QFKTN                ++Q  Q +
Sbjct: 753  DESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNA---------------QKQEDQTE 797

Query: 2521 ATSLPTHSSPPPDITRQFTKNLRNLADIIS-SQPTDTVPTDPQSAPSSLSIPVKAEQADL 2697
              S+P+HS  PPDI++QFTKNL+N+AD++S SQ +   PT PQ   SS S+ V  ++ D+
Sbjct: 798  TKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQIL-SSQSVQVNTDRMDV 856

Query: 2698 PMTAST--DQHIGPFLRPAXXXXXXXXXXXXWGDVEHLFEGYDXXXXXXXXXXXXXXXXX 2871
              T S   DQ      +P             WGDVEHLF+GYD                 
Sbjct: 857  KATVSDSGDQLTANGSKPESAAGPPQSKNT-WGDVEHLFDGYDDQQKAAIQRERARRIEE 915

Query: 2872 XNTLFAAKKXXXXXXXXXXXXNSAKFVEVDPVHEEILRKKEEQDREKPHRHLFRFSHMGM 3051
               +F+A+K            NSAKFVEVDPVH+EILRKKEEQDREK  RHLFRF HMGM
Sbjct: 916  QKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGM 975

Query: 3052 WTKLRPGIWTFLEKASKLYELHLYTMGNKLYATEMAKVLDPSGVLFSGRVISKGDDGDPF 3231
            WTKLRPGIW FLEKASKLYELHLYTMGNKLYATEMAKVLDP GVLF+GRVISKGDDGD  
Sbjct: 976  WTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVL 1035

Query: 3232 DGDEKIPKSKDLEGVLGMEXXXXXXXXXXXXWPHNKLNLILVERYTYFPCSRRQFGLPGP 3411
            DGDE++PKSKDLEGVLGME            WPHNKLNLI+VERYTYFPCSRRQFGLPGP
Sbjct: 1036 DGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGP 1095

Query: 3412 SLLEIDHDERPEDGTLASSLMVIERIHQNFFSNLSLKEVDVRNILASEQRKILAGCRIVF 3591
            SLLEIDHDERPEDGTLASSL VIERIHQ+FFSN +L EVDVRNILASEQRKILAGCRIVF
Sbjct: 1096 SLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVF 1155

Query: 3592 SRIFPVGETKPHQHPLWQTAEQFGAVCTTQIDNLVTHVVANSLGTDKVNWALSTGRFVVH 3771
            SR+FPVGE  PH HPLWQTAE FGAVCT QID  VTHVVANSLGTDKVNWALSTGRFVVH
Sbjct: 1156 SRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVH 1215

Query: 3772 PGWVEASALLYRRASENDFAVK 3837
            PGWVEASALLYRRA+E DFA+K
Sbjct: 1216 PGWVEASALLYRRANEQDFAIK 1237


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  848 bits (2190), Expect = 0.0
 Identities = 566/1277 (44%), Positives = 679/1277 (53%), Gaps = 21/1277 (1%)
 Frame = +1

Query: 70   SNYGSGLYNFAWAQAVQNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 249
            S Y   LYN AWAQAVQNK                                         
Sbjct: 110  SGYTPRLYNLAWAQAVQNKPLNDIFVIIDDSGDEMDVKMDDV------------------ 151

Query: 250  XXXXXXXXXXXXSEVVELKSEEGEKCLSVKEEEENLSPITD---------EAEFEKRICL 402
                        SE  E + EEGE  L  + + ++   + D         E E  +R+  
Sbjct: 152  ------------SEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVERVKS 199

Query: 403  ILEALDTVTVSDAEKCFGEVCSRLRTALDTLQLI-----VSESGLSVVGGITDQCFVGFE 567
            I E L++VTV +AEK F  VCSRL+  L +LQ +     V ES +     +  Q      
Sbjct: 200  IQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIR 259

Query: 568  DVNSVFNSMNPKEKGQNKQVFTSLLAHMKNQVPSLFSAEQMEEVQAVLHSLDPPPSISSG 747
             +N VF SMN  +K  NK VF+ LL+ ++     +FS + ++EV+ ++  LD P + SS 
Sbjct: 260  ALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSA 319

Query: 748  VKDMEVEREVPVNNDVKSELGILGEKPVKSANELGILGQKPGKDLGILGEKPGQMFNSLK 927
                +V       NDV+          V       IL            E  G+ F S K
Sbjct: 320  EASDKV-------NDVQ----------VTDGMNRNILDSSV--------ESSGRAFASAK 354

Query: 928  VVPLEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDVDSLPSPTREA 1107
                                            RGR  FGPLLDLH+DHD DSLPSPT +A
Sbjct: 355  K------------------------------FRGRFIFGPLLDLHKDHDEDSLPSPTGKA 384

Query: 1108 PPPLHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDALKAVSTYQQKFGRNSFLL 1287
            P      K ++            KVA++ ++D+ +H YETDALKAVSTYQQKFG  SFL 
Sbjct: 385  PQCFPVNKSEL---------VTAKVAHE-TQDSIMHPYETDALKAVSTYQQKFGLTSFLP 434

Query: 1288 SNRLPSPTPXXXXXXXXXXXXXXXXXXPSVGNARAVNPLMPPQAVVSVTEHMDKSGGQGV 1467
             ++LPSPTP                   ++      N       +VS    MD   G  V
Sbjct: 435  IDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDIVQGLVV 494

Query: 1468 PVKTMEQIASRPNSHGRASSKSRDPRLRLANPDGGSLDPNARPLLKDTPQNEHVAGVLNS 1647
            P  T   + SR NS  RAS+KSRDPRLRLA+ D GSLD N RPL            V NS
Sbjct: 495  PRNT-GAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPL----------PAVSNS 543

Query: 1648 RKNKNDGDIIGDGRTVKKQRNGLGNWEVSRENCSSVGTPVIDRIQSTENRGDPRKGDPRK 1827
             K    G+I+      +KQ+              S   P++D                  
Sbjct: 544  PKVDPLGEIVSS----RKQK--------------SAEEPLLD------------------ 567

Query: 1828 SVSGGIFSGQRQGSTTGIFNPVTGGPQQLPVTGSTPQSLPSIGTFNPITGGLQNLPVIGS 2007
               G +   QR G T+    P T    ++ VTG        IG   P             
Sbjct: 568  ---GPVTKRQRNGLTS----PATKLESKVTVTG--------IGCDKPYV----------- 601

Query: 2008 TPHLLPSIGTFNPITGGPQQLPVIG-STTQPLPSLLKDIAVDPALLMQLIMEQQRLQAEA 2184
                            G + LPV+  STT  L SLLKDIAV+PA+ M +  +      E 
Sbjct: 602  -------------TVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNK-----VEQ 643

Query: 2185 QKCSNLPQSRMPAFSSSFTPGAAPLVTTAQSKSSGVEQKPLEKQQILPS--MNLQGELG- 2355
            QK  +  ++ +   +S+   G  P  + A  K S + QKP    Q+  +  MN Q E G 
Sbjct: 644  QKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMNPQDESGK 703

Query: 2356 IRMKPRDPRRILHSSTFQTNESFGSTQFKTNGSLTSNSQASKDNISGRQQSQQGDATSLP 2535
            +RMKPRDPRRILH+++FQ + S GS QFKTN                ++Q  Q +  S+P
Sbjct: 704  VRMKPRDPRRILHANSFQRSGSSGSEQFKTNA---------------QKQEDQTETKSVP 748

Query: 2536 THSSPPPDITRQFTKNLRNLADIIS-SQPTDTVPTDPQSAPSSLSIPVKAEQADLPMTAS 2712
            +HS  PPDI++QFTKNL+N+AD++S SQ +   PT PQ   SS S+ V  ++ D+  T S
Sbjct: 749  SHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQIL-SSQSVQVNTDRMDVKATVS 807

Query: 2713 T--DQHIGPFLRPAXXXXXXXXXXXXWGDVEHLFEGYDXXXXXXXXXXXXXXXXXXNTLF 2886
               DQ      +P             WGDVEHLF+GYD                    +F
Sbjct: 808  DSGDQLTANGSKPESAAGPPQSKNT-WGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMF 866

Query: 2887 AAKKXXXXXXXXXXXXNSAKFVEVDPVHEEILRKKEEQDREKPHRHLFRFSHMGMWTKLR 3066
            +A+K            NSAKFVEVDPVH+EILRKKEEQDREK  RHLFRF HMGMWTKLR
Sbjct: 867  SARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLR 926

Query: 3067 PGIWTFLEKASKLYELHLYTMGNKLYATEMAKVLDPSGVLFSGRVISKGDDGDPFDGDEK 3246
            PGIW FLEKASKLYELHLYTMGNKLYATEMAKVLDP GVLF+GRVISKGDDGD  DGDE+
Sbjct: 927  PGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDER 986

Query: 3247 IPKSKDLEGVLGMEXXXXXXXXXXXXWPHNKLNLILVERYTYFPCSRRQFGLPGPSLLEI 3426
            +PKSKDLEGVLGME            WPHNKLNLI+VERYTYFPCSRRQFGLPGPSLLEI
Sbjct: 987  VPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEI 1046

Query: 3427 DHDERPEDGTLASSLMVIERIHQNFFSNLSLKEVDVRNILASEQRKILAGCRIVFSRIFP 3606
            DHDERPEDGTLASSL VIERIHQ+FFSN +L EVDVRNILASEQRKILAGCRIVFSR+FP
Sbjct: 1047 DHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFP 1106

Query: 3607 VGETKPHQHPLWQTAEQFGAVCTTQIDNLVTHVVANSLGTDKVNWALSTGRFVVHPGWVE 3786
            VGE  PH HPLWQTAE FGAVCT QID  VTHVVANSLGTDKVNWALSTGRFVVHPGWVE
Sbjct: 1107 VGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVE 1166

Query: 3787 ASALLYRRASENDFAVK 3837
            ASALLYRRA+E DFA+K
Sbjct: 1167 ASALLYRRANEQDFAIK 1183


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  823 bits (2125), Expect = 0.0
 Identities = 493/1013 (48%), Positives = 612/1013 (60%), Gaps = 25/1013 (2%)
 Frame = +1

Query: 874  KDLGILGEKPGQMFNSLKVVPLEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLL 1053
            KD  + G+  G   +++  +P +         N A +  +  K G++S  + R +  PLL
Sbjct: 263  KDNDVNGKSSGHDMSAVNKLPTDSFVN-----NKANLSIEGPKTGVSS-FKSRAALLPLL 316

Query: 1054 DLHRDHDVDSLPSPTREAPPPLHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDA 1233
            DLH+DHD DSLPSPTRE+  PL   +              PK+    + ++ +H YETDA
Sbjct: 317  DLHKDHDADSLPSPTRESALPLPAYRVLT-----------PKMV-LDTGNSRMHPYETDA 364

Query: 1234 LKAVSTYQQKFGRNSFLLSNRLPSPTPXXXXXXXXXXXXXXXXXXPSVGNARAVNPLMPP 1413
            LKAVS+YQQKF ++SF L++RLPSPTP                   SV + R  NPL   
Sbjct: 365  LKAVSSYQQKFSKSSFALTDRLPSPTPSEESGNGDGDTGGEVSSSLSVSSFRPANPLTSG 424

Query: 1414 QAVVSVT-EHMDKSGGQGV-PVKTMEQIASRPNSHGRASSKSRDPRLRLANPDGGSLDPN 1587
            Q+  S++   MD S   GV  +K+  + +S P+   +AS+KSRDPRLR  N D  +LD N
Sbjct: 425  QSNASISLPRMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDSNALDQN 484

Query: 1588 ARPL-LKDTPQNEHVAGVLNSRKNKNDGDIIGDGRTVKKQRNGLGNWEVSR--------- 1737
             R + + +T + E + G +N ++ K   D I DG ++K+Q+N L N  V R         
Sbjct: 485  HRAVPVVNTLKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVKTMVGSG 544

Query: 1738 ---ENCSSVGTPVIDRIQSTENRGDPRKGDPRKSVSGGIFSGQRQGSTTGIFNPVTGGPQ 1908
               E+   VG   +++ Q  +N     + DPR+   GG+ +     S+  I      G +
Sbjct: 545  GWLEDTDMVGPQTMNKNQLVDNA----ESDPRRKDGGGVCTSSSCISSVNI-----SGTE 595

Query: 1909 QLPVTGSTPQSLPSIGTFNPITGGLQNLPVIGSTPHLLPSIGTFNPITGGPQQLPVIGST 2088
            Q+PVTG++           PI G L                            +PV GST
Sbjct: 596  QIPVTGTSV----------PIGGEL----------------------------VPVKGST 617

Query: 2089 TQPLPSLLKDIAVDPALLMQLIM--EQQRLQAEAQKCSNLP-QSRMPAFSSSFTPGAAPL 2259
               +P LLK+IAV+P +L+ ++   +QQRL  EAQ+    P +S     +S+   G  P+
Sbjct: 618  AA-IPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPVDPAKSTTYPLNSNSMLGTVPV 676

Query: 2260 VTTAQSKSSGVEQKPLEKQQILPSMNLQGELG-IRMKPRDPRRILHSSTFQTNESFGSTQ 2436
            V  A S   G+  +P    Q+ P +    +LG IRMKPRDPRR+LH++  Q N S GS  
Sbjct: 677  VGAAHS---GILPRPAGTVQVSPQLGTADDLGKIRMKPRDPRRVLHNNALQRNGSMGSEH 733

Query: 2437 FKTNGSLTSNSQASKDNISGRQQSQQGDATSLPTHSSPPPDITRQFTKNLRNLADIISSQ 2616
             KTN +    +Q +KDN + ++Q  Q +   +P  S   PDI+  FTKNL+N+ADI+S  
Sbjct: 734  LKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPLQSLALPDISMPFTKNLKNIADIVSVS 793

Query: 2617 PTDT----VPTDPQSAPSSLSIPVKAEQADLPMTASTDQHIGPFLRP--AXXXXXXXXXX 2778
               T    VP +P S P   +I            +S+DQ +G    P  A          
Sbjct: 794  HASTSQPLVPQNPASQPMRTTI------------SSSDQFLGIGSAPGAAAAAAAGPRTQ 841

Query: 2779 XXWGDVEHLFEGYDXXXXXXXXXXXXXXXXXXNTLFAAKKXXXXXXXXXXXXNSAKFVEV 2958
              WGDVEHLFEGY+                    LF+A+K            NSAKFVEV
Sbjct: 842  NAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKKLFSARKLCLVLDLDHTLLNSAKFVEV 901

Query: 2959 DPVHEEILRKKEEQDREKPHRHLFRFSHMGMWTKLRPGIWTFLEKASKLYELHLYTMGNK 3138
            DPVH+EILRKKEEQDREK HRHLFRF HMGMWTKLRPGIW FLEKASKLYELHLYTMGNK
Sbjct: 902  DPVHDEILRKKEEQDREKAHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 961

Query: 3139 LYATEMAKVLDPSGVLFSGRVISKGDDGDPFDGDEKIPKSKDLEGVLGMEXXXXXXXXXX 3318
            LYATEMAKVLDP+GVLF+GRVIS+GDDG+PFDGDE+IPKSKDLEGVLGME          
Sbjct: 962  LYATEMAKVLDPTGVLFNGRVISRGDDGEPFDGDERIPKSKDLEGVLGMESGVVIMDDSV 1021

Query: 3319 XXWPHNKLNLILVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLMVIERIHQN 3498
              WPHNKLNLI+VERY YFPCSRRQFGLPGPSLLEIDHDERPEDGTLA SL VIERIHQN
Sbjct: 1022 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQN 1081

Query: 3499 FFSNLSLKEVDVRNILASEQRKILAGCRIVFSRIFPVGETKPHQHPLWQTAEQFGAVCTT 3678
            FF++ SL E DVRNILASEQRKILAGCRIVFSR+FPVGE  PH HPLWQTAEQFGAVCT 
Sbjct: 1082 FFTHPSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTN 1141

Query: 3679 QIDNLVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRASENDFAVK 3837
            QID  VTHVVANSLGTDKVNWALSTGRFVV+PGWVEASALLYRRA+E DFA+K
Sbjct: 1142 QIDEQVTHVVANSLGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAIK 1194


>ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1244

 Score =  805 bits (2079), Expect = 0.0
 Identities = 519/1198 (43%), Positives = 674/1198 (56%), Gaps = 22/1198 (1%)
 Frame = +1

Query: 310  EEGEKCLSVKEEEENLSPITDEAEFEKRICLILEALDT-----------VTVSDAEKCFG 456
            EEGE     + E E  S +   ++ EK   + ++  D+           VTV++  + F 
Sbjct: 130  EEGEIDADAEPEGEAESVVVAVSDSEKLDDVKMDVSDSEQLGARGVLEGVTVANVVESFA 189

Query: 457  EVCSRLRTALDTLQLIVSESGLSVVGGITDQCFVGFEDVNSVFNSMNPKEKGQNKQVFTS 636
            + CS+L+   +TL  ++S    S    +    F   E V SVF SM+  EK QNK     
Sbjct: 190  QTCSKLQ---NTLPEVLSRPAGSEKDDLVRLSFNATEVVYSVFCSMDSSEKEQNKDSILR 246

Query: 637  LLAHMKNQVPS-LFSAEQMEEVQAVLHSLDPPPSISSGVKDMEVEREVPVNN-DVKSELG 810
            LL+ +K+Q  + LFS E ++E+Q ++ ++D   S+ + V    + +E  +   ++K++  
Sbjct: 247  LLSFVKDQQQAQLFSPEHVKEIQGMMTAID---SVGALVNSEAIGKEKELQTTEIKTQ-- 301

Query: 811  ILGEKPVKSANELGILGQKPGKDLGILGEKPGQMFNSLKVVPLEPSSTKLGDQNNAYMGS 990
                    SA E+ I   K  ++  +   +  ++ +  K +  + + T           S
Sbjct: 302  ------ENSAVEVQIHEIKTQENQAV---EAAELISYSKPLHRDITGT-----------S 341

Query: 991  QYLKQGLTSGIRGRGSFGPLLDLHRDHDVDSLPSPTREAPPPLHFRKQQVDGDRSIKAES 1170
            Q LK G  S I+GRG   PLLDLH+DHD DSLPSPTREAP      K    G+  +++ S
Sbjct: 342  QALKFGQNS-IKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNKLLSVGESMVRSGS 400

Query: 1171 KPKVANKKSEDASVHFYETDALKAVSTYQQKFGRNSFLLSNRLPSPTPXXXXXXXXXXXX 1350
                    SE +  H YETDALKAVSTYQQKFGR+S   +++ PSPTP            
Sbjct: 401  ASAKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSPTPSGDCEDEVVDTN 460

Query: 1351 XXXXXXPSVGNARAVNPLMPPQAVVSVTEHMDKSGGQGVPVKTMEQIASRPNSHG-RASS 1527
                   +     +  P +  Q  VS T  MD+S   G     ++  A+ P S   ++S+
Sbjct: 461  EEVSSASTGDFLTSTKPTLLDQPPVSATS-MDRSSMHGFISSRVD--ATGPGSFPVKSSA 517

Query: 1528 KSRDPRLRLANPDGGSLDPNARPLLKDTPQNEHVAGVLNSRKNKNDGDIIGDGRTVKKQR 1707
            K+RDPRLR  N D  ++D N   L+ +  + E+ +G   SRK K   +   D    K+ +
Sbjct: 518  KNRDPRLRFINSDASAVD-NLSTLINNMSKVEY-SGTTISRKQKAAEEPSLDVTVSKRLK 575

Query: 1708 NGLGNWEVSRENCSSVGTPVIDRIQSTENRGDPRKGDPRKSVSGGIFSGQRQGSTTGIFN 1887
            + L N E                     N  + R G      SGG          TG   
Sbjct: 576  SSLENTE--------------------HNMSEVRTG------SGGWLE-----ENTGPGA 604

Query: 1888 PVTGGPQQLPVTGSTPQSLPSIGTFNPITGGLQNLPVIGSTPHLLPSIGTFNPITGGPQQ 2067
             +      +   G  P++  ++ T +    G  N                FN  +   +Q
Sbjct: 605  QLIERNHLMDKFG--PEAKKTLNTVSSSCTGSDN----------------FNATSIRNEQ 646

Query: 2068 LPVIGSTT-QPLPSLLKDIAVDPALLMQLIM--EQQRLQAEAQKCSNL-PQSRMPAFSSS 2235
             P+  S     LP+LLK+ +V+P +L+ ++   E Q+  A++     L P S  PA  + 
Sbjct: 647  APITASNVLASLPALLKEASVNPIMLVNILRLAEAQKKSADSAAIMLLHPTSSNPAMGTD 706

Query: 2236 FTPGAAPLVTTAQSKSSGVEQKPLEKQQILPSMNLQGELG-IRMKPRDPRRILHSS-TFQ 2409
             T      + T   +SS V   P+  Q    +  LQ + G IRMKPRDPRRILH++ T Q
Sbjct: 707  STASIGSSMATGLLQSS-VGMLPVSSQSTSTAQTLQDDSGKIRMKPRDPRRILHTNNTIQ 765

Query: 2410 TNESFGSTQFKTNGSLTSNSQASKDNISGRQQSQQGDATSLPTHSSPPPDITRQFTKNLR 2589
             +   G+ QFK   S  SN+Q + DN++  +   + D   +PT SS  PDI RQFT+NL+
Sbjct: 766  KSGDLGNEQFKAIVSPVSNNQRTGDNVNAPKLEGRVDNKLVPTQSSAQPDIARQFTRNLK 825

Query: 2590 NLADIISSQPTDTVPTDPQSAPSSLSIPVKAEQADLPMTASTDQHIGPFLRPAXXXXXXX 2769
            N+ADI+S     +  T      SS S+P+ +++ +     S+ Q++   +  A       
Sbjct: 826  NIADIMSVSQESSTHTPVSQNFSSASVPLTSDRGEQKSVVSSSQNLQADMASAHETAASV 885

Query: 2770 XXXXX--WGDVEHLFEGYDXXXXXXXXXXXXXXXXXXNTLFAAKKXXXXXXXXXXXXNSA 2943
                   WGDVEHLFEGYD                  N +FAA+K            NSA
Sbjct: 886  TSRSQSTWGDVEHLFEGYDEQQKAAIQRERARRIEEQNKMFAARKLCLVLDLDHTLLNSA 945

Query: 2944 KFVEVDPVHEEILRKKEEQDREKPHRHLFRFSHMGMWTKLRPGIWTFLEKASKLYELHLY 3123
            KFVEVDP+H+EILRKKEEQDREKPHRHLFRF HMGMWTKLRPGIW FLEKASKLYELHLY
Sbjct: 946  KFVEVDPLHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLY 1005

Query: 3124 TMGNKLYATEMAKVLDPSGVLFSGRVISKGDDGDPFDGDEKIPKSKDLEGVLGMEXXXXX 3303
            TMGNKLYATEMAKVLDP GVLF+GRVIS+GDD D  DG+E++PKSKDLEGVLGME     
Sbjct: 1006 TMGNKLYATEMAKVLDPKGVLFAGRVISRGDDTDSVDGEERVPKSKDLEGVLGMESSVVI 1065

Query: 3304 XXXXXXXWPHNKLNLILVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLMVIE 3483
                   WPHNKLNLI+VERYTYFPCSRRQFGLPGPSLLEIDHDERPE GTLASSL VIE
Sbjct: 1066 IDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAVIE 1125

Query: 3484 RIHQNFFSNLSLKEVDVRNILASEQRKILAGCRIVFSRIFPVGETKPHQHPLWQTAEQFG 3663
            +IHQ FF++ SL+EVDVRNILASEQRKILAGCRIVFSR+FPVGE  PH HPLWQTAEQFG
Sbjct: 1126 KIHQIFFASQSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFG 1185

Query: 3664 AVCTTQIDNLVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRASENDFAVK 3837
            AVCT QID  VTHVVANS GTDKVNWAL+ GRFVVHPGWVEASALLYRRA+E DFA+K
Sbjct: 1186 AVCTNQIDEQVTHVVANSPGTDKVNWALNNGRFVVHPGWVEASALLYRRANEQDFAIK 1243


>ref|XP_003551805.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1221

 Score =  789 bits (2037), Expect = 0.0
 Identities = 522/1278 (40%), Positives = 671/1278 (52%), Gaps = 14/1278 (1%)
 Frame = +1

Query: 46   VWNNYP-FSSNYGSGLYNFAWAQAVQNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
            +++ YP     Y SGLYN AWAQAVQNK                                
Sbjct: 54   LYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNSNNSNRLASVAVN 113

Query: 223  XXXXXXXXXXXXXXXXXXXXXSEVVELKSE-EGEKCLSVKEEEENLSPITDEAEFEKRIC 399
                                     E + E E    + V  + E L  +  +    +++ 
Sbjct: 114  PKDVVVVDVDKEEGELEEGEIDADAEPEGEAESVVAVPVVSDSEKLDDVKRDVSNSEQLG 173

Query: 400  LILEALDTVTVSDAEKCFGEVCSRLRTALDTLQLIVSESGLSVVGGITDQCFVGFEDVNS 579
             +   L+ VTV++  + F + CS+L+ AL     ++S    S    +    F   E V S
Sbjct: 174  -VRGVLEGVTVANVAESFAQTCSKLQNALPE---VLSRPADSERDDLVRLSFNATEVVYS 229

Query: 580  VFNSMNPKEKGQNKQVFTSLLAHMKNQVPS-LFSAEQMEEVQAVLHSLDPPPSISSGVKD 756
            VF SM+  +K QNK     LL+ +K+Q  + LFS E ++E+Q ++ ++D      + V  
Sbjct: 230  VFCSMDSLKKEQNKDSILRLLSFVKDQQQAQLFSPEHIKEIQGMMTAID---YFGALVNS 286

Query: 757  MEVEREVPVNNDVKSELGILGEKPVKSANELGILGQKPGKDLGILGEKPGQMFNSLKVVP 936
              + +E  +   V++      E     A EL    +    D  I+G              
Sbjct: 287  EAIGKEKELQTTVQTHEIKTQENQAVEAAELISYNKPLHSD--IIG-------------- 330

Query: 937  LEPSSTKLGDQNNAYMGSQYLKQGLTSGIRGRGSFGPLLDLHRDHDVDSLPSPTREAPPP 1116
                             S  LK G  S I+GRG   PLLDLH+DHD DSLPSPTREAP  
Sbjct: 331  ----------------ASHALKFGQNS-IKGRGVLLPLLDLHKDHDADSLPSPTREAPSC 373

Query: 1117 LHFRKQQVDGDRSIKAESKPKVANKKSEDASVHFYETDALKAVSTYQQKFGRNSFLLSNR 1296
                K        ++ +S         E +  H YETDALKAVSTYQQKFGR+S   +++
Sbjct: 374  FPVNKLLSPESGKMELDS---------EGSKFHLYETDALKAVSTYQQKFGRSSLFTNDK 424

Query: 1297 LPSPTPXXXXXXXXXXXXXXXXXXPSVGNARAVNPLMPPQAVVSVTEHMDKSGGQGVPVK 1476
             PSPTP                   +     +  P +     VS T   D+S   G    
Sbjct: 425  FPSPTPSGDCEDEIVDTNEEVSSASTGDFLTSTKPTLLDLPPVSATS-TDRSSLHGF--- 480

Query: 1477 TMEQIASRPNSHG------RASSKSRDPRLRLANPDGGSLDPNARPLLKDTPQNEHVAGV 1638
                I+SR ++ G      ++S+K+RDPRLR  N D  ++D N   L+ + P+ E+ AG 
Sbjct: 481  ----ISSRVDAAGPGSLPVKSSAKNRDPRLRFVNSDASAVD-NPSTLIHNMPKVEY-AGT 534

Query: 1639 LNSRKNKNDGDIIGDGRTVKKQRNGLGNWEVSRENCSSVGTPVIDRIQSTENRGDPRKGD 1818
              SRK K   +   D    K+Q++ L N E    N S V T +   ++  E+ G   +  
Sbjct: 535  TISRKQKAAEEPSLDVTVSKRQKSPLENTE---HNMSEVRTGIGGWLE--EHTGPGAQFI 589

Query: 1819 PRKSVSGGIFSGQRQGSTTGIFNPVTGGPQQLPVTGSTPQSLPSIGTFNPITGGLQNLPV 1998
             R  +                          +   G  PQ   ++ T +    G  N   
Sbjct: 590  ERNHL--------------------------MDKFGPEPQK--TLNTVSSSCTGSDN--- 618

Query: 1999 IGSTPHLLPSIGTFNPITGGPQQLPVIGSTT-QPLPSLLKDIAVDPALLMQLIMEQQRLQ 2175
                         FN  +   +Q P+  S     LP+LLK  AV+P +L+ L+   +  +
Sbjct: 619  -------------FNATSIRNEQAPITSSNVLASLPALLKGAAVNPTMLVNLLRIAEAQK 665

Query: 2176 AEAQKCSNLPQSRMPAFSSSFTPGAAPLVTTAQSKSSGVEQKPLEKQQILPSMNLQGELG 2355
              A   +N+    +   SS+   G     +   S ++G+ Q  +    +     LQ + G
Sbjct: 666  KSADSATNM---LLHPTSSNSAMGTDSTASIGSSMATGLLQSSVGMLPVSSQQTLQDDSG 722

Query: 2356 -IRMKPRDPRRILHSS-TFQTNESFGSTQFKTNGSLTSNSQASKDNISGRQQSQQGDATS 2529
             IRMKPRDPRRILH++ T Q + + G+ QFK   S  SN+Q + DN++ ++   + D+  
Sbjct: 723  KIRMKPRDPRRILHTNNTIQKSGNLGNEQFKAIVSPVSNNQGTGDNVNAQKLEGRVDSKL 782

Query: 2530 LPTHSSPPPDITRQFTKNLRNLADIISSQPTDTVPTDPQSAPSSLSIPVKAEQADLPMTA 2709
            +PT  S  PDI RQF +NL+N+ADI+S     +  T      SS S+P+ +++ +     
Sbjct: 783  VPTQPSAQPDIARQFARNLKNIADIMSVSQESSTHTPVAQIFSSASVPLTSDRGEQKSVV 842

Query: 2710 STDQHI--GPFLRPAXXXXXXXXXXXXWGDVEHLFEGYDXXXXXXXXXXXXXXXXXXNTL 2883
            S  Q++  G                  WGDVEHLFEGYD                  N +
Sbjct: 843  SNSQNLEAGMVSAHETAASGTCRSQNTWGDVEHLFEGYDEQQKAAIQRERARRIEEQNKM 902

Query: 2884 FAAKKXXXXXXXXXXXXNSAKFVEVDPVHEEILRKKEEQDREKPHRHLFRFSHMGMWTKL 3063
            FAA+K            NSAKFVEVDPVH+EILRKKEEQDREKPHRHLFRF HMGMWTKL
Sbjct: 903  FAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKL 962

Query: 3064 RPGIWTFLEKASKLYELHLYTMGNKLYATEMAKVLDPSGVLFSGRVISKGDDGDPFDGDE 3243
            RPGIW FLEKASKLYELHLYTMGNKLYATEMAKVLDP G+LF+GRVIS+GDD D  DG+E
Sbjct: 963  RPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGLLFAGRVISRGDDTDSVDGEE 1022

Query: 3244 KIPKSKDLEGVLGMEXXXXXXXXXXXXWPHNKLNLILVERYTYFPCSRRQFGLPGPSLLE 3423
            + PKSKDLEGVLGME            WPHNKLNLI+VERYTYFPCSRRQFGLPGPSLLE
Sbjct: 1023 RAPKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLE 1082

Query: 3424 IDHDERPEDGTLASSLMVIERIHQNFFSNLSLKEVDVRNILASEQRKILAGCRIVFSRIF 3603
            IDHDERPE GTLASSL VIE+IHQ FF++ SL+EVDVRNILASEQRKILAGCRIVFSR+F
Sbjct: 1083 IDHDERPEAGTLASSLAVIEKIHQIFFASRSLEEVDVRNILASEQRKILAGCRIVFSRVF 1142

Query: 3604 PVGETKPHQHPLWQTAEQFGAVCTTQIDNLVTHVVANSLGTDKVNWALSTGRFVVHPGWV 3783
            PVGE  PH HPLWQTAEQFGA CT QID  VTHVVANS GTDKVNWAL+ GRFVVHPGWV
Sbjct: 1143 PVGEANPHLHPLWQTAEQFGAFCTNQIDEQVTHVVANSPGTDKVNWALNNGRFVVHPGWV 1202

Query: 3784 EASALLYRRASENDFAVK 3837
            EASALLYRRA+E DFA+K
Sbjct: 1203 EASALLYRRANEQDFAIK 1220