BLASTX nr result

ID: Coptis23_contig00009064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009064
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis ...   114   8e-24
gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]            110   1e-22
ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus...   110   2e-22
gb|ACF06475.1| ribosomal protein L30 [Elaeis guineensis]              108   3e-22
ref|XP_002309997.1| predicted protein [Populus trichocarpa] gi|1...   108   3e-22

>ref|XP_002281037.1| PREDICTED: 60S ribosomal protein L30 [Vitis vinifera]
           gi|296082469|emb|CBI21474.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = +1

Query: 1   EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 156
           EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH
Sbjct: 61  EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 112


>gb|ADB02906.1| 60S ribosomal protein L30 [Jatropha curcas]
          Length = 112

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = +1

Query: 1   EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 156
           EYYAML+KVGVHH+NGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK+LPGDH
Sbjct: 61  EYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGDH 112


>ref|XP_002528991.1| 60S ribosomal protein L30, putative [Ricinus communis]
           gi|223531581|gb|EEF33410.1| 60S ribosomal protein L30,
           putative [Ricinus communis]
          Length = 112

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/52 (92%), Positives = 52/52 (100%)
 Frame = +1

Query: 1   EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 156
           EYYAML+KVGVHH+NGNNVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPGDH
Sbjct: 61  EYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDH 112


>gb|ACF06475.1| ribosomal protein L30 [Elaeis guineensis]
          Length = 112

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = +1

Query: 1   EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 153
           EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK++PGD
Sbjct: 61  EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSIPGD 111


>ref|XP_002309997.1| predicted protein [Populus trichocarpa] gi|118481493|gb|ABK92689.1|
           unknown [Populus trichocarpa]
           gi|118483057|gb|ABK93438.1| unknown [Populus
           trichocarpa] gi|222852900|gb|EEE90447.1| predicted
           protein [Populus trichocarpa]
          Length = 112

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = +1

Query: 1   EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDH 156
           EYYAMLAKVGVHH+NGNNVDLGTACGKYFRVSCLSIID GDSDIIKT+PGDH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDAGDSDIIKTVPGDH 112


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