BLASTX nr result

ID: Coptis23_contig00009062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009062
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002882464.1| hypothetical protein ARALYDRAFT_477933 [Arab...   120   1e-25
ref|XP_002530288.1| protein binding protein, putative [Ricinus c...   120   1e-25
emb|CBI16306.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002282323.1| PREDICTED: uncharacterized protein LOC100257...   119   3e-25

>ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|222852536|gb|EEE90083.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/95 (62%), Positives = 69/95 (72%)
 Frame = -3

Query: 287 SSQCLHN*YCISSIDKSDNLCHVDMEADDKEIPEEEAVCRICFISLCEGGNTFKMECSCK 108
           +S   H+ +  +    +D +  V M+ADD+EI EEEAVCRICF  +CE GNT KMECSCK
Sbjct: 154 ASFATHDEHVATDPSNADQITPVPMQADDEEIAEEEAVCRICF-DVCEEGNTLKMECSCK 212

Query: 107 GDLRLTHEACVLKWFSIKGNKKCDVCWQEVLNLPV 3
           GDLRL HE C +KWFS KGNK CDVC QEV NLPV
Sbjct: 213 GDLRLVHEDCAIKWFSTKGNKYCDVCGQEVKNLPV 247


>ref|XP_002882464.1| hypothetical protein ARALYDRAFT_477933 [Arabidopsis lyrata subsp.
           lyrata] gi|297328304|gb|EFH58723.1| hypothetical protein
           ARALYDRAFT_477933 [Arabidopsis lyrata subsp. lyrata]
          Length = 430

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/85 (65%), Positives = 64/85 (75%)
 Frame = -3

Query: 257 ISSIDKSDNLCHVDMEADDKEIPEEEAVCRICFISLCEGGNTFKMECSCKGDLRLTHEAC 78
           +SS   +D +  V  E  D+EIPEEEAVCRIC + +CE GNT KMECSCKGDLRL HEAC
Sbjct: 194 VSSETSADQISSVPPEETDEEIPEEEAVCRIC-LDVCEEGNTLKMECSCKGDLRLVHEAC 252

Query: 77  VLKWFSIKGNKKCDVCWQEVLNLPV 3
            +KWFS KG + CDVC QEV NLPV
Sbjct: 253 AMKWFSTKGTRTCDVCRQEVKNLPV 277


>ref|XP_002530288.1| protein binding protein, putative [Ricinus communis]
           gi|223530186|gb|EEF32095.1| protein binding protein,
           putative [Ricinus communis]
          Length = 495

 Score =  120 bits (301), Expect = 1e-25
 Identities = 51/70 (72%), Positives = 59/70 (84%)
 Frame = -3

Query: 212 EADDKEIPEEEAVCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDV 33
           ++D ++IPEEEAVCRIC + LCEGG TFKMECSCKG+L L H+ C +KWFSIKGNK CDV
Sbjct: 251 DSDGEDIPEEEAVCRICLVELCEGGETFKMECSCKGELALAHQECAVKWFSIKGNKTCDV 310

Query: 32  CWQEVLNLPV 3
           C QEV NLPV
Sbjct: 311 CKQEVRNLPV 320


>emb|CBI16306.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/70 (72%), Positives = 57/70 (81%)
 Frame = -3

Query: 212 EADDKEIPEEEAVCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDV 33
           EAD ++IPEEEAVCRIC + LCEGG T KMECSCKG+L L H+ C +KWF IKGNK CDV
Sbjct: 91  EADGEDIPEEEAVCRICLVELCEGGETLKMECSCKGELALAHQECAVKWFRIKGNKNCDV 150

Query: 32  CWQEVLNLPV 3
           C QEV NLPV
Sbjct: 151 CKQEVQNLPV 160


>ref|XP_002282323.1| PREDICTED: uncharacterized protein LOC100257089 [Vitis vinifera]
          Length = 557

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/70 (72%), Positives = 57/70 (81%)
 Frame = -3

Query: 212 EADDKEIPEEEAVCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDV 33
           EAD ++IPEEEAVCRIC + LCEGG T KMECSCKG+L L H+ C +KWF IKGNK CDV
Sbjct: 287 EADGEDIPEEEAVCRICLVELCEGGETLKMECSCKGELALAHQECAVKWFRIKGNKNCDV 346

Query: 32  CWQEVLNLPV 3
           C QEV NLPV
Sbjct: 347 CKQEVQNLPV 356


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