BLASTX nr result

ID: Coptis23_contig00009055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009055
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268575.1| PREDICTED: signal peptide peptidase-like 2B ...   366   e-119
ref|XP_002529686.1| Minor histocompatibility antigen H13, putati...   362   e-116
ref|XP_003532320.1| PREDICTED: signal peptide peptidase-like 2B-...   360   e-116
ref|XP_003552754.1| PREDICTED: signal peptide peptidase-like 2B-...   355   e-115
ref|XP_002301641.1| predicted protein [Populus trichocarpa] gi|2...   355   e-115

>ref|XP_002268575.1| PREDICTED: signal peptide peptidase-like 2B [Vitis vinifera]
           gi|296089635|emb|CBI39454.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  366 bits (939), Expect(2) = e-119
 Identities = 179/253 (70%), Positives = 213/253 (84%)
 Frame = +1

Query: 1   VVMIPKSGGEAIRKAMVAGKKMEFLLYSPSRPVVDYSVIFLWLMAVGTIVCASVWSEVIL 180
           VVMIPKSGG+ + K++  GKK+E LLY+P+RPVVD +V+FLW+MAVGT+VCAS+WSE I 
Sbjct: 155 VVMIPKSGGDTLSKSIADGKKVELLLYAPTRPVVDSAVVFLWMMAVGTVVCASLWSEYIA 214

Query: 181 CEQHVEPYDQLSEKDSSASDAVKNDSDEEFIDISVKGAVLFVVVASTFLLLLYFFMSSWF 360
           CEQ+ E Y++LS K S A  A K+D ++E +DIS KGAV FV+ ASTFL+LLYFFMSSWF
Sbjct: 215 CEQNDERYNELSPKASEAG-ATKDDPEKEVLDISAKGAVGFVITASTFLVLLYFFMSSWF 273

Query: 361 IWILIVLFCIGGSQGMLNCVVALISRVCKNCGRKSLSLPILGEVSVLSVALLPFCLGFAI 540
           +W+LIVLFCIGG +GM  C+V LI R CKN  RK+++LP+ GEV+VLS+ +L FCL FAI
Sbjct: 274 VWVLIVLFCIGGVEGMHACIVTLILRGCKNSERKTVNLPLFGEVTVLSLGVLLFCLSFAI 333

Query: 541 FWAATRHASYAWIGQDVLGICLMITVLQTARLPNIKVASVLLCCAFVYDIFWVFISPFFF 720
            WA TR AS++WIGQDVLGI LMITVLQ ARLPNIKVASVLLCCAFVYDIFWVFISP  F
Sbjct: 334 AWAITRKASFSWIGQDVLGISLMITVLQIARLPNIKVASVLLCCAFVYDIFWVFISPVIF 393

Query: 721 KDSVMIAVARGDN 759
           KDSVMIAVARGDN
Sbjct: 394 KDSVMIAVARGDN 406



 Score = 91.3 bits (225), Expect(2) = e-119
 Identities = 39/43 (90%), Positives = 43/43 (100%)
 Frame = +3

Query: 834 GEAIPMLLRIPRFFDPWGGYDMIGFGDILFPGLLISFAFRYDR 962
           GE+IPMLLR+PRFFDPWGGYDMIGFGDILFPGLLISFAFR+D+
Sbjct: 409 GESIPMLLRVPRFFDPWGGYDMIGFGDILFPGLLISFAFRFDK 451


>ref|XP_002529686.1| Minor histocompatibility antigen H13, putative [Ricinus communis]
           gi|223530834|gb|EEF32697.1| Minor histocompatibility
           antigen H13, putative [Ricinus communis]
          Length = 535

 Score =  362 bits (929), Expect(2) = e-116
 Identities = 170/253 (67%), Positives = 213/253 (84%)
 Frame = +1

Query: 1   VVMIPKSGGEAIRKAMVAGKKMEFLLYSPSRPVVDYSVIFLWLMAVGTIVCASVWSEVIL 180
           VV+IPKSGGE + K+MVAG+K+E  LY+P+RPVVDYSVIF+WLMAVGT+ CA++WSE   
Sbjct: 153 VVLIPKSGGEYLNKSMVAGQKVEIKLYAPNRPVVDYSVIFIWLMAVGTVTCATLWSEFTA 212

Query: 181 CEQHVEPYDQLSEKDSSASDAVKNDSDEEFIDISVKGAVLFVVVASTFLLLLYFFMSSWF 360
            E+  E Y++LS K++S   A+K+D ++EF+DI+ K AV+FV+ ASTFL+LLYFFMSSWF
Sbjct: 213 PEETDERYNELSPKENSRVSAIKDD-EKEFLDINAKSAVIFVLTASTFLVLLYFFMSSWF 271

Query: 361 IWILIVLFCIGGSQGMLNCVVALISRVCKNCGRKSLSLPILGEVSVLSVALLPFCLGFAI 540
           +W+LI+LFC+GG +GM NC+V LISR C+N  +K ++LP+LGE S+LS+ +L  CL FAI
Sbjct: 272 VWLLIILFCLGGVEGMHNCIVTLISRKCRNFAQKKVNLPLLGETSILSLVVLCCCLAFAI 331

Query: 541 FWAATRHASYAWIGQDVLGICLMITVLQTARLPNIKVASVLLCCAFVYDIFWVFISPFFF 720
           FW A R ASY+WIGQD+LGICLMITVLQ ARLPNIKVA+VLLCCAFVYDIFWVF+SP  F
Sbjct: 332 FWIANRRASYSWIGQDILGICLMITVLQVARLPNIKVAAVLLCCAFVYDIFWVFLSPIIF 391

Query: 721 KDSVMIAVARGDN 759
             SVMIAVARGDN
Sbjct: 392 HQSVMIAVARGDN 404



 Score = 84.3 bits (207), Expect(2) = e-116
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +3

Query: 834 GEAIPMLLRIPRFFDPWGGYDMIGFGDILFPGLLISFAFRYDR 962
           GE+IPMLLR PRF DPWGGYDMIGFGDILFPGLL+SFA RYD+
Sbjct: 407 GESIPMLLRFPRFADPWGGYDMIGFGDILFPGLLLSFARRYDK 449


>ref|XP_003532320.1| PREDICTED: signal peptide peptidase-like 2B-like [Glycine max]
          Length = 530

 Score =  360 bits (923), Expect(2) = e-116
 Identities = 165/252 (65%), Positives = 213/252 (84%)
 Frame = +1

Query: 1   VVMIPKSGGEAIRKAMVAGKKMEFLLYSPSRPVVDYSVIFLWLMAVGTIVCASVWSEVIL 180
           VVMI KS G+++ K++ +G K+E LLY+P RP+VD+SV FLWLM++GTIVCAS+WS++  
Sbjct: 151 VVMITKSAGQSLNKSLTSGSKVEILLYAPPRPLVDFSVAFLWLMSIGTIVCASLWSDLTT 210

Query: 181 CEQHVEPYDQLSEKDSSASDAVKNDSDEEFIDISVKGAVLFVVVASTFLLLLYFFMSSWF 360
            E+  E Y++L  K+SS ++  K+D D+E ++I  KGAV+FV+ ASTFL+LL+FFMSSWF
Sbjct: 211 PEKSDERYNELCPKESSNAETAKDDLDKEIVNIDSKGAVIFVIAASTFLVLLFFFMSSWF 270

Query: 361 IWILIVLFCIGGSQGMLNCVVALISRVCKNCGRKSLSLPILGEVSVLSVALLPFCLGFAI 540
           +W+LIVLFCIGG +GM NC+V+L  R C+NCG+K++SLP+ GE+S+ S+A+L FC+ FAI
Sbjct: 271 VWVLIVLFCIGGIEGMHNCIVSLTLRKCQNCGQKTVSLPLFGEISIFSLAVLLFCVAFAI 330

Query: 541 FWAATRHASYAWIGQDVLGICLMITVLQTARLPNIKVASVLLCCAFVYDIFWVFISPFFF 720
           FWAATR  SY+WIGQD+LGICLMITVLQ ARLPNIKVA+VLLCCAFVYDIFWVFISP  F
Sbjct: 331 FWAATRQESYSWIGQDILGICLMITVLQLARLPNIKVATVLLCCAFVYDIFWVFISPVIF 390

Query: 721 KDSVMIAVARGD 756
            +SVMIAVARGD
Sbjct: 391 HESVMIAVARGD 402



 Score = 86.3 bits (212), Expect(2) = e-116
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +3

Query: 834 GEAIPMLLRIPRFFDPWGGYDMIGFGDILFPGLLISFAFRYDR 962
           GEAIPMLLR PR FDPWGGYDMIGFGDILFPGLLISFA R+D+
Sbjct: 406 GEAIPMLLRFPRLFDPWGGYDMIGFGDILFPGLLISFAHRFDK 448


>ref|XP_003552754.1| PREDICTED: signal peptide peptidase-like 2B-like [Glycine max]
          Length = 530

 Score =  355 bits (911), Expect(2) = e-115
 Identities = 164/252 (65%), Positives = 211/252 (83%)
 Frame = +1

Query: 1   VVMIPKSGGEAIRKAMVAGKKMEFLLYSPSRPVVDYSVIFLWLMAVGTIVCASVWSEVIL 180
           VVMI KS G+++ K+  +G K+E LLY+P RP+VD+SV FLWLM+VGTIVCAS+WS++  
Sbjct: 151 VVMIAKSAGQSLNKSFTSGSKVEILLYAPPRPLVDFSVAFLWLMSVGTIVCASLWSDLTT 210

Query: 181 CEQHVEPYDQLSEKDSSASDAVKNDSDEEFIDISVKGAVLFVVVASTFLLLLYFFMSSWF 360
            E+  E Y++L  K+SS ++  K+D D+E ++I  KGAV+FV+ ASTFL+LL+FFMS+WF
Sbjct: 211 PEKSDERYNKLCPKESSNAETEKDDLDKEIVNIDSKGAVIFVIAASTFLVLLFFFMSTWF 270

Query: 361 IWILIVLFCIGGSQGMLNCVVALISRVCKNCGRKSLSLPILGEVSVLSVALLPFCLGFAI 540
           +W+LIVLFCIGG +GM NC+V+L  R C+NCG+K++SLP+ GE+S+ S+A+L FC+ FAI
Sbjct: 271 VWVLIVLFCIGGIEGMHNCIVSLTLRKCQNCGQKTVSLPLFGEISIFSLAVLLFCVAFAI 330

Query: 541 FWAATRHASYAWIGQDVLGICLMITVLQTARLPNIKVASVLLCCAFVYDIFWVFISPFFF 720
           FWAATR  SY+W GQD+LGICLMITVLQ ARLPNIKVA+VLLCCAFVYDIFWVFISP  F
Sbjct: 331 FWAATRQESYSWTGQDILGICLMITVLQLARLPNIKVATVLLCCAFVYDIFWVFISPVIF 390

Query: 721 KDSVMIAVARGD 756
            +SVMIAVARGD
Sbjct: 391 HESVMIAVARGD 402



 Score = 86.3 bits (212), Expect(2) = e-115
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +3

Query: 834 GEAIPMLLRIPRFFDPWGGYDMIGFGDILFPGLLISFAFRYDR 962
           GEAIPMLLR PR FDPWGGYDMIGFGDILFPGLLISFA R+D+
Sbjct: 406 GEAIPMLLRFPRLFDPWGGYDMIGFGDILFPGLLISFAHRFDK 448


>ref|XP_002301641.1| predicted protein [Populus trichocarpa] gi|222843367|gb|EEE80914.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  355 bits (910), Expect(2) = e-115
 Identities = 164/253 (64%), Positives = 208/253 (82%)
 Frame = +1

Query: 1   VVMIPKSGGEAIRKAMVAGKKMEFLLYSPSRPVVDYSVIFLWLMAVGTIVCASVWSEVIL 180
           VV+IPKSGG+++ K++V G+K+E L Y+P RP VD SVIFLW+MAVGT+VCASVWSE+  
Sbjct: 162 VVLIPKSGGQSLNKSIVNGQKVELLFYAPVRPPVDLSVIFLWIMAVGTVVCASVWSEIAA 221

Query: 181 CEQHVEPYDQLSEKDSSASDAVKNDSDEEFIDISVKGAVLFVVVASTFLLLLYFFMSSWF 360
            E+  E Y++LS K++S + A K+D+++E IDI+VK A++FV+ AS FLLLLYFFMSSWF
Sbjct: 222 SEETNERYNELSPKETSNASAFKDDTEKEVIDINVKSAIVFVITASAFLLLLYFFMSSWF 281

Query: 361 IWILIVLFCIGGSQGMLNCVVALISRVCKNCGRKSLSLPILGEVSVLSVALLPFCLGFAI 540
           +W+LIVLFCIGG +GM NC+  +I R+C+NCGRK L+LP+ GE S+ S+ +L  C+ F+ 
Sbjct: 282 VWLLIVLFCIGGIEGMHNCITTVILRICRNCGRKKLNLPLFGETSLFSLLVLICCVVFST 341

Query: 541 FWAATRHASYAWIGQDVLGICLMITVLQTARLPNIKVASVLLCCAFVYDIFWVFISPFFF 720
            WA  R ASY+W GQD+LGICLMITVLQ ARLPNIKVA+VLLCCAFVYDIFWVF+SP  F
Sbjct: 342 VWAINRQASYSWAGQDILGICLMITVLQVARLPNIKVATVLLCCAFVYDIFWVFLSPIIF 401

Query: 721 KDSVMIAVARGDN 759
             SVMIAVARGDN
Sbjct: 402 HQSVMIAVARGDN 414



 Score = 86.3 bits (212), Expect(2) = e-115
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +3

Query: 834 GEAIPMLLRIPRFFDPWGGYDMIGFGDILFPGLLISFAFRYDR 962
           GE IPMLLRIPRF D WGGYDMIGFGDILFPGLL+SFAFRYD+
Sbjct: 417 GETIPMLLRIPRFADEWGGYDMIGFGDILFPGLLVSFAFRYDK 459


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