BLASTX nr result

ID: Coptis23_contig00009052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009052
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140172.1| PREDICTED: uncharacterized protein LOC101221...   348   1e-93
emb|CAJ77501.1| expp1 protein precursor [Solanum tuberosum]           343   3e-92
ref|XP_003538086.1| PREDICTED: uncharacterized protein LOC100814...   342   9e-92
ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana] ...   337   3e-90
ref|NP_001240927.1| uncharacterized protein LOC100818051 precurs...   335   8e-90

>ref|XP_004140172.1| PREDICTED: uncharacterized protein LOC101221211 [Cucumis sativus]
           gi|449523305|ref|XP_004168664.1| PREDICTED:
           uncharacterized LOC101221211 [Cucumis sativus]
          Length = 262

 Score =  348 bits (893), Expect = 1e-93
 Identities = 169/236 (71%), Positives = 199/236 (84%), Gaps = 1/236 (0%)
 Frame = -2

Query: 896 IIMTAMFTLMIVSVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQQLTPC 717
           +++  M  +++V   ++NTN+V+QPCADTK+QR+DGFTFGIAFS+R SFF NQ+ QL+PC
Sbjct: 27  LLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQLSPC 86

Query: 716 DRRXXXXXXXXXXXSVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAF 537
           DRR            VFRP+VD+ISLL+INT S+FFPD+ GGYMVAFAGRKYAARS PAF
Sbjct: 87  DRRLSLASLNSQLA-VFRPRVDQISLLSINT-SDFFPDAFGGYMVAFAGRKYAARSQPAF 144

Query: 536 VANGTYTVTSFTLVFEFQKGRLQNLFWKRDGCASC-GSGKSNYVCLNNQDCAIRTSSCKG 360
           VAN T+ VTSFTLV EFQKGRLQNL+WKRDGCASC G  +S+YVCLNNQDCAIRTSSC+ 
Sbjct: 145 VANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRN 204

Query: 359 KGGPVDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYNK 192
           +GG VDCS+GIQL FSGTDKHL ALNSWYEV+NLRQYSLYN+YSNLR SLT QYN+
Sbjct: 205 RGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQYNR 260


>emb|CAJ77501.1| expp1 protein precursor [Solanum tuberosum]
          Length = 243

 Score =  343 bits (881), Expect = 3e-92
 Identities = 167/244 (68%), Positives = 201/244 (82%)
 Frame = -2

Query: 923 MSITKMGIAIIMTAMFTLMIVSVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFI 744
           M+I ++ + ++   + +L +++ S S+TN V+ PCAD KVQR+DGF+FGIAF++R SFF+
Sbjct: 1   MAIQRLPLLLVFLLISSLTLLAQSRSDTNHVYSPCADAKVQRSDGFSFGIAFASRTSFFV 60

Query: 743 NQTQQLTPCDRRXXXXXXXXXXXSVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRK 564
           N + QL+PCD+R            VFRPKVDEISLLTINT+S FFPDS GGYMVAFAGRK
Sbjct: 61  NSSVQLSPCDKRLSLSSANSQIA-VFRPKVDEISLLTINTSS-FFPDSYGGYMVAFAGRK 118

Query: 563 YAARSTPAFVANGTYTVTSFTLVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCA 384
           YAARS PAFVANGT+TVTSFTLV EF+KGRL+NL+WKRDGC+SC SG SN+VCLN QDCA
Sbjct: 119 YAARSLPAFVANGTFTVTSFTLVHEFKKGRLENLYWKRDGCSSC-SGNSNFVCLNGQDCA 177

Query: 383 IRTSSCKGKGGPVDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTD 204
           IRT++CK +GG VDCS+GIQL FSGTDKH    NSW+EV+NLRQYSLY LYSNLRGSLTD
Sbjct: 178 IRTNNCKNRGGNVDCSLGIQLTFSGTDKHASVFNSWFEVKNLRQYSLYGLYSNLRGSLTD 237

Query: 203 QYNK 192
           QYNK
Sbjct: 238 QYNK 241


>ref|XP_003538086.1| PREDICTED: uncharacterized protein LOC100814491 [Glycine max]
          Length = 240

 Score =  342 bits (877), Expect = 9e-92
 Identities = 171/241 (70%), Positives = 197/241 (81%), Gaps = 2/241 (0%)
 Frame = -2

Query: 908 MGIAIIMTAMFTLMIVSVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQ- 732
           M +   +  M  L+ V+ +++NTN+V+QPCAD ++QR+DGFTFGIAFS+R SFF NQ Q 
Sbjct: 1   MALKRALWLMLLLLSVAAAATNTNNVYQPCADARIQRSDGFTFGIAFSSRDSFFYNQNQS 60

Query: 731 -QLTPCDRRXXXXXXXXXXXSVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAA 555
            QL+PCDRR            +FRP+VDEISLLTINT+S FFPDS GGYMVAFAGRKYAA
Sbjct: 61  LQLSPCDRRLSLSFSNSQLA-LFRPRVDEISLLTINTSS-FFPDSYGGYMVAFAGRKYAA 118

Query: 554 RSTPAFVANGTYTVTSFTLVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCAIRT 375
           RS  AFVAN TYTVTSFTLV EFQ+GRLQN +WKRDGC+SC   KSN++CLN QDCAIRT
Sbjct: 119 RSPLAFVANSTYTVTSFTLVLEFQRGRLQNFYWKRDGCSSCKE-KSNFICLNKQDCAIRT 177

Query: 374 SSCKGKGGPVDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYN 195
           SSCKG+GG VDCS+GIQLAFSGTD+HLR LNSW+EVENLRQYSLY LYSNLR SLT QYN
Sbjct: 178 SSCKGRGGAVDCSLGIQLAFSGTDRHLRVLNSWFEVENLRQYSLYGLYSNLRDSLTGQYN 237

Query: 194 K 192
           K
Sbjct: 238 K 238


>ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana]
           gi|17529172|gb|AAL38812.1| unknown protein [Arabidopsis
           thaliana] gi|23297558|gb|AAN12895.1| unknown protein
           [Arabidopsis thaliana] gi|332644348|gb|AEE77869.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 246

 Score =  337 bits (864), Expect = 3e-90
 Identities = 163/222 (73%), Positives = 186/222 (83%)
 Frame = -2

Query: 860 SVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQQLTPCDRRXXXXXXXXX 681
           S  S NTN ++ PC+DT++QR+DGFTFGIAFS+RPSFFINQT  L+PCDRR         
Sbjct: 25  SGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQ 84

Query: 680 XXSVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAFVANGTYTVTSFT 501
              VFRPK+DEISLL+INT++ FFPD+ GGYMVAFAGRKYAARS PAF+AN T+ VTSFT
Sbjct: 85  FS-VFRPKIDEISLLSINTSA-FFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFT 142

Query: 500 LVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCAIRTSSCKGKGGPVDCSIGIQL 321
           LV EFQKGRLQNL+WKRDGCASC  G  N+VCLN QDCAIRT SCKG+GG VDCS+GIQL
Sbjct: 143 LVMEFQKGRLQNLYWKRDGCASC-KGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQL 201

Query: 320 AFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYN 195
           AFSGTDKHL  LNSWYEVENL+QYSLY LYSNL+ SLT+Q+N
Sbjct: 202 AFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFN 243


>ref|NP_001240927.1| uncharacterized protein LOC100818051 precursor [Glycine max]
           gi|255644951|gb|ACU22975.1| unknown [Glycine max]
          Length = 242

 Score =  335 bits (860), Expect = 8e-90
 Identities = 167/229 (72%), Positives = 190/229 (82%), Gaps = 2/229 (0%)
 Frame = -2

Query: 872 LMIVSVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQ--QLTPCDRRXXX 699
           L  V+ +++NTN V+ PC+D ++QR+DGFTFGIAFS+R SFF NQ Q  QL+PCDRR   
Sbjct: 15  LSAVAAAATNTNSVYHPCSDARIQRSDGFTFGIAFSSRDSFFYNQNQSLQLSPCDRRLSL 74

Query: 698 XXXXXXXXSVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAFVANGTY 519
                    +FRP+VDEISLLTINT+S FFPD+ GGYMVAFAG+KYAARS  AFVAN TY
Sbjct: 75  SSSNAQLA-LFRPRVDEISLLTINTSS-FFPDNYGGYMVAFAGKKYAARSPLAFVANSTY 132

Query: 518 TVTSFTLVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCAIRTSSCKGKGGPVDC 339
           TVTSFTLV EFQ+GRL NL+WKRDGC+SC  GKSN VCLN QDCAIRTSSCKG+GG VDC
Sbjct: 133 TVTSFTLVLEFQRGRLHNLYWKRDGCSSC-KGKSNLVCLNKQDCAIRTSSCKGRGGAVDC 191

Query: 338 SIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYNK 192
           S+GIQLAFSGTD+HLR LNSW+EVENLRQYSLY LYSNLR SLT QYNK
Sbjct: 192 SLGIQLAFSGTDRHLRVLNSWFEVENLRQYSLYGLYSNLRDSLTSQYNK 240


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