BLASTX nr result

ID: Coptis23_contig00009039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009039
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   289   1e-75
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   280   1e-72
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   279   1e-72
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   263   8e-68
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...   245   3e-62

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  289 bits (740), Expect = 1e-75
 Identities = 189/367 (51%), Positives = 213/367 (58%), Gaps = 10/367 (2%)
 Frame = -3

Query: 1421 EAGIMSGRES-SYGIQKHQPVST--GTPNMRLGFSSDGTAVYKPILTTATTSPAYQQPIT 1251
            E GIMSGRES + G+QK  PV +     +MRL F+ DGTA+YKPI T++   P YQ    
Sbjct: 6    EPGIMSGRESFNVGMQK-SPVQSQPSMQSMRLAFAPDGTAIYKPITTSSPPPPPYQGGGG 64

Query: 1250 AT---GVENAVATTVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXX 1080
            A    G +      + P G++  +N+GE +           PDGTM              
Sbjct: 65   AGSTGGGDGPSPAAITPHGLN--INVGEPVKRKRGRPRKYGPDGTMSLALTTVSPTAAVS 122

Query: 1079 XXXXXXPQQNVQPSGGFXXXXXXXXXXXSMKKSRGRPPGSGKKQQIAALGSAGIGFTPHV 900
                        PS              +MKK+RGRPPGSGKKQQ+AALGSAGIGFTPHV
Sbjct: 123  PGSG-----GFSPSSAGAGNPASSASAEAMKKARGRPPGSGKKQQLAALGSAGIGFTPHV 177

Query: 899  ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXX 720
            ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEI    
Sbjct: 178  ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSLS 237

Query: 719  XXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADGRKDLK 540
                     GQRSRTGGLSVS                   ASPVQVVVGSFIADG+K+  
Sbjct: 238  GSFLLSESGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKE-- 295

Query: 539  PNH---SEPAAAPAKLXXXXXXXXXXXXXSRGTLSE-XXXXXXXPLNHSTGACNNSNAQG 372
            P H   S+P  AP KL             SRGTLSE        PLN STG CNNSN QG
Sbjct: 296  PKHTAPSDPTLAPGKLAAGGAAAGANSPPSRGTLSESSGGGPGSPLNQSTGTCNNSNQQG 355

Query: 371  MANVPWK 351
            ++N+PWK
Sbjct: 356  LSNMPWK 362


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
            gi|297745600|emb|CBI40765.3| unnamed protein product
            [Vitis vinifera]
          Length = 353

 Score =  280 bits (715), Expect = 1e-72
 Identities = 186/366 (50%), Positives = 209/366 (57%), Gaps = 9/366 (2%)
 Frame = -3

Query: 1421 EAGIMSGRES-SYGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPAYQQPITA 1248
            E GIM+ RE  S G+QK+  P      NMRL FS DG AVYKP+   + TSP YQ     
Sbjct: 5    ETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQSS-GG 60

Query: 1247 TGVENAVATTVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXXXXXX 1068
            TG + +    +IP G++ +M   E +           PDGTM                  
Sbjct: 61   TGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV------- 112

Query: 1067 XXPQQNVQPSGGFXXXXXXXXXXXS---MKKSRGRPPGSGKKQQIAALGSAGIGFTPHVI 897
                 NV  SGG            S   +KK+RGRPPGS KKQQ+ ALGSAG+GFTPHVI
Sbjct: 113  -----NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVI 167

Query: 896  TVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXX 717
            TVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI     
Sbjct: 168  TVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSG 227

Query: 716  XXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADGRKDLK- 540
                    GQRSRTGGLSVS                   ASPVQVVVGSFIADGRK+ K 
Sbjct: 228  SFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKS 287

Query: 539  PNHSEPAAAPAKL---XXXXXXXXXXXXXSRGTLSEXXXXXXXPLNHSTGACNNSNAQGM 369
             +  EP++AP K+                SRGTLSE       PLN STGACNNSN  GM
Sbjct: 288  ASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGM 347

Query: 368  ANVPWK 351
             ++PWK
Sbjct: 348  TSIPWK 353


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  279 bits (714), Expect = 1e-72
 Identities = 191/391 (48%), Positives = 217/391 (55%), Gaps = 10/391 (2%)
 Frame = -3

Query: 1421 EAGIMSGRES-SYGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPAYQQPITA 1248
            E GIM+ RE  S G+QK+  P      NMRL FS DG AVYKP+   + TSP YQ     
Sbjct: 5    ETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQSS-GG 60

Query: 1247 TGVENAVATTVIPQGISTSMNIGEQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXXXXXX 1068
            TG + +    +IP G++ +M   E +           PDGTM                  
Sbjct: 61   TGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV------- 112

Query: 1067 XXPQQNVQPSGGFXXXXXXXXXXXS---MKKSRGRPPGSGKKQQIAALGSAGIGFTPHVI 897
                 NV  SGG            S   +KK+RGRPPGS KKQQ+ ALGSAG+GFTPHVI
Sbjct: 113  -----NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTPHVI 167

Query: 896  TVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXX 717
            TVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI     
Sbjct: 168  TVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSG 227

Query: 716  XXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXASPVQVVVGSFIADGRKDLK- 540
                    GQRSRTGGLSVS                   ASPVQVVVGSFIADGRK+ K 
Sbjct: 228  SFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKESKS 287

Query: 539  PNHSEPAAAPAKL---XXXXXXXXXXXXXSRGTLSEXXXXXXXPLNHSTGACNNSNAQGM 369
             +  EP++AP K+                SRGTLSE       PLN STGACNNSN  GM
Sbjct: 288  ASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGM 347

Query: 368  ANVPWK*PS*FLTTSTPICVVG-LGLMNSFI 279
             ++PW           P  V G LG ++ F+
Sbjct: 348  TSIPWNLTLLLAVKFQPSSVTGDLGRVSRFV 378


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
            gi|223551427|gb|EEF52913.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 374

 Score =  263 bits (673), Expect = 8e-68
 Identities = 180/387 (46%), Positives = 206/387 (53%), Gaps = 30/387 (7%)
 Frame = -3

Query: 1421 EAGIM-SGRESSYGIQKHQPVSTGTPNMRLGFSSDGTAVYKPILTTATTSPAYQQPITAT 1245
            E G+M S     +G+   QPV     NMRL F +DG++VYKP +TTAT SP+YQ   +A 
Sbjct: 5    ETGVMTSTTREPFGVVSPQPV---IQNMRLAFGADGSSVYKP-MTTATNSPSYQPSPSAA 60

Query: 1244 GVENAVATTVIPQGISTSMNIG-EQMXXXXXXXXXXXPDGTMXXXXXXXXXXXXXXXXXX 1068
                 V    +  GI+ +M  G + M           PDGTM                  
Sbjct: 61   SPGGFVEGGSL--GINVNMGSGNDAMKRKRGRPRKYGPDGTMALALVSAPQSVGI----- 113

Query: 1067 XXPQQNVQPSGGFXXXXXXXXXXXSM---------------------------KKSRGRP 969
                   QP+GG            S+                           KK RGRP
Sbjct: 114  ------TQPAGGGGFSTPTSAAATSVGPSTTTIAANPSLPSGSGGGSVSPTGIKKGRGRP 167

Query: 968  PGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVT 789
            PGS KKQQ+ ALGSAG GFTPH+ITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVT
Sbjct: 168  PGSNKKQQLEALGSAGFGFTPHIITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVT 227

Query: 788  LRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLSVSXXXXXXXXXXXXXXXX 609
            LRQ ATSGG+VTYEGRFEI             GQRSRTGGLSVS                
Sbjct: 228  LRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGL 287

Query: 608  XXXASPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXSRGTLSEXXX 432
               ASPVQVVV SFI+D RK+LK PNH EP +A  +L             SRGT SE   
Sbjct: 288  LLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRGTFSESSG 347

Query: 431  XXXXPLNHSTGACNNSNAQGMANVPWK 351
                PLN STGACNNSN QG++++PWK
Sbjct: 348  GPGSPLNQSTGACNNSNLQGISSMPWK 374


>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  245 bits (625), Expect = 3e-62
 Identities = 135/215 (62%), Positives = 152/215 (70%), Gaps = 1/215 (0%)
 Frame = -3

Query: 992 MKKSRGRPPGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSA 813
           +KK+RGRPPGS KKQQ+ ALGSAG GFTPHVITVKAGED+SSK+MSFSQHGPRAVCILSA
Sbjct: 58  VKKARGRPPGSSKKQQLNALGSAGFGFTPHVITVKAGEDISSKVMSFSQHGPRAVCILSA 117

Query: 812 NGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRSRTGGLSVSXXXXXXXX 633
           NGAISNVTLRQ ATSGGTVTYEGRFEI             GQRSR+GGLSV         
Sbjct: 118 NGAISNVTLRQQATSGGTVTYEGRFEILALSGSYLPSENGGQRSRSGGLSVCLSGPDGRV 177

Query: 632 XXXXXXXXXXXASPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXSR 456
                      A+PVQVVVGSFIADGRK+ K  NH+EP++A ++L             SR
Sbjct: 178 LGGTVAGLLVAAAPVQVVVGSFIADGRKESKTANHTEPSSATSRLPPRGGSTGVSSPPSR 237

Query: 455 GTLSEXXXXXXXPLNHSTGACNNSNAQGMANVPWK 351
           GTLSE       PLN STGACNNSN QGM+++PW+
Sbjct: 238 GTLSESSGGPGSPLNQSTGACNNSNPQGMSSMPWE 272


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