BLASTX nr result
ID: Coptis23_contig00009034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00009034
(1887 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|... 692 0.0
ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|2235... 675 0.0
ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|g... 657 0.0
ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max] 650 0.0
ref|NP_001242287.1| uncharacterized protein LOC100786789 [Glycin... 650 0.0
>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|296089089|emb|CBI38792.3|
unnamed protein product [Vitis vinifera]
Length = 491
Score = 692 bits (1785), Expect = 0.0
Identities = 371/493 (75%), Positives = 407/493 (82%), Gaps = 9/493 (1%)
Frame = -3
Query: 1870 MSLFKGFFDSLSDIFA---TPPSQNINPTMENSPVG---IGTPVSNERTAYKLKGYFELA 1709
MS KG DSL IF+ +P +P ++ +GT VSN+R AYKLKGY++LA
Sbjct: 1 MSFLKGIIDSLGSIFSDSTSPDEAQSSPNFSDNGAMDGVVGTGVSNQRIAYKLKGYYDLA 60
Query: 1708 KEEIAKAVRAEEWGLAEDAVSHYKNAQRILIEAKDTRPPSFISPSEQEKVKSYHQKITKW 1529
EEIAKAVRAEEWGL +DA+ HYKNAQRILIEA T PSFIS SEQEKVKSY QKI+KW
Sbjct: 61 TEEIAKAVRAEEWGLVDDAIVHYKNAQRILIEASSTSTPSFISSSEQEKVKSYRQKISKW 120
Query: 1528 QGQVSERLQVLSQRTLGTSSTSKTTIAQQPKSVKVST---ARKDLVQKPSVSGRNNVSAR 1358
QGQV+ERL++L +R GTS T+K T+A + ST AR D++QK ++ R + R
Sbjct: 121 QGQVAERLEILIRRAGGTS-TNKNTLADTKPATTSSTKSNARTDVLQKSPLTNRRSPIMR 179
Query: 1357 NQTNIAGSPNKANQENTSAYDTKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLLEMVIL 1178
+Q++ S +K QE+ YD KLVEMINT IVDRSPSVKWDDVAGLEKAKQ+LLEMVIL
Sbjct: 180 SQSDKVVS-SKPVQESGHGYDAKLVEMINTVIVDRSPSVKWDDVAGLEKAKQALLEMVIL 238
Query: 1177 PTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAE 998
PTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES ATFFNVSASSLTSKWVGE E
Sbjct: 239 PTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESAATFFNVSASSLTSKWVGEGE 298
Query: 997 KLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLVQFDGVSSNPDDLV 818
KLVRTLFMVAISRQPSVIFMDEIDSIMSTR+ NEN+ASRRLKSEFLVQFDGV+SNPDDLV
Sbjct: 299 KLVRTLFMVAISRQPSVIFMDEIDSIMSTRMTNENEASRRLKSEFLVQFDGVTSNPDDLV 358
Query: 817 IVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLVKE 638
IVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRR KGQAFSLPG DLE LV+E
Sbjct: 359 IVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLVQE 418
Query: 637 TEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYADFQIAMTVIRPSLQKSKW 458
TEGYSGSDLQALCEEAAMMPIRELG+NILTV ANQVRPLRY DFQ AMTVIRPSLQK KW
Sbjct: 419 TEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQVRPLRYGDFQKAMTVIRPSLQKGKW 478
Query: 457 DELEKWNQEFGSS 419
ELE WNQEFGS+
Sbjct: 479 QELEDWNQEFGSN 491
>ref|XP_002511743.1| Spastin, putative [Ricinus communis] gi|223548923|gb|EEF50412.1|
Spastin, putative [Ricinus communis]
Length = 518
Score = 675 bits (1742), Expect = 0.0
Identities = 367/519 (70%), Positives = 405/519 (78%), Gaps = 35/519 (6%)
Frame = -3
Query: 1870 MSLFKGFFDSLSDIFATPPSQNINPTMENSPVGI----GTPVSNERTAYKLKGYFELAKE 1703
MSL KG DSL +F++ S+ NP+ NSP + G+PV+NER AYKLKGYF+LAKE
Sbjct: 1 MSLLKGIIDSLGSVFSSYQSEEGNPS--NSPRNMEGVDGSPVTNERVAYKLKGYFDLAKE 58
Query: 1702 EIAKAVRAEEWGLAEDAVSHYKNAQRILIEAKDTRPPSFISPSEQEKVKSYHQKITKWQG 1523
EI KAVRAEEWGL +DA+ HYKNAQRI IE T PS+IS SEQEKVKSY QKI+KWQG
Sbjct: 59 EIDKAVRAEEWGLPDDAIVHYKNAQRIFIEGNSTSVPSYISFSEQEKVKSYRQKISKWQG 118
Query: 1522 QVSERLQVLSQRTLGTSSTSKTTIAQQPKSVKVSTA--RKDLVQKPSVSGRNNVSARNQT 1349
+SERLQ L++R GTSS T +V S + R+DL QK S RN RNQ
Sbjct: 119 HISERLQALNRRAAGTSSNKNTLTHAHTAAVSSSKSNFRQDLSQKSPCSTRNTPVVRNQP 178
Query: 1348 NIAG-----------SPN------------------KANQENTSAYDTKLVEMINTAIVD 1256
N A SP K+ QE+ + Y+ KLVEMINTAIVD
Sbjct: 179 NKAAKSKIAQNMPQNSPRSTGNTAVTRNQPDTAAKPKSAQESGNGYEAKLVEMINTAIVD 238
Query: 1255 RSPSVKWDDVAGLEKAKQSLLEMVILPTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKA 1076
RSPSVKWDDVAGLEKAKQSL+EMVILPTKR+DLFTGLRRPARGLLLFGPPGNGKTMLAKA
Sbjct: 239 RSPSVKWDDVAGLEKAKQSLMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKA 298
Query: 1075 VASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANE 896
VASESEATFFNVSASSLTSKWVGE EKLVRTLFMVAISRQPSVIF+DEIDSIMSTRL NE
Sbjct: 299 VASESEATFFNVSASSLTSKWVGEGEKLVRTLFMVAISRQPSVIFLDEIDSIMSTRLTNE 358
Query: 895 NDASRRLKSEFLVQFDGVSSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVR 716
NDASRRLKSEFL+QFDGV+SNP+DLVIVIGATNKPQELDDAVLRRLVKRIYVPLPD+N+R
Sbjct: 359 NDASRRLKSEFLIQFDGVTSNPNDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDKNIR 418
Query: 715 RXXXXXXXKGQAFSLPGRDLESLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVNAN 536
KGQAFSL DLE LV+ETEGYSGSDLQALCEEAAMMPIRELG +ILTV AN
Sbjct: 419 LLLFKHKLKGQAFSLSDGDLERLVRETEGYSGSDLQALCEEAAMMPIRELGPDILTVKAN 478
Query: 535 QVRPLRYADFQIAMTVIRPSLQKSKWDELEKWNQEFGSS 419
QVR LRY DFQ AMTVIRPSL KSKW+EL++WN+EFGS+
Sbjct: 479 QVRRLRYEDFQKAMTVIRPSLSKSKWEELQRWNEEFGSN 517
>ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|gb|AES79990.1| Spastin
[Medicago truncatula]
Length = 486
Score = 657 bits (1694), Expect = 0.0
Identities = 347/495 (70%), Positives = 400/495 (80%), Gaps = 11/495 (2%)
Frame = -3
Query: 1870 MSLFKGFFDSLSDIFATPPSQNINPT---------MENSPVGIGTPVSNERTAYKLKGYF 1718
MS +G DS + +F+ S + + T ME SP + +SNER AYKLKGY+
Sbjct: 1 MSFLQGIIDSFNSVFSPQSSSSFSQTNFSASSSSSMEASP-SPSSSISNERVAYKLKGYY 59
Query: 1717 ELAKEEIAKAVRAEEWGLAEDAVSHYKNAQRILIEAKDTRPPSFISPSEQEKVKSYHQKI 1538
+LA +EI KAVRAEEWGL +DA+ HY+NA RIL+EA T PSFI+PSE++KV+SY QKI
Sbjct: 60 DLATQEIDKAVRAEEWGLIDDAILHYRNAHRILLEANSTPVPSFITPSEKQKVQSYRQKI 119
Query: 1537 TKWQGQVSERLQVLSQRTLGTSSTSKTTIAQQPKSV--KVSTARKDLVQKPSVSGRNNVS 1364
+KWQGQVSERLQ LS+R + + T+ Q +V K+S K ++QK N
Sbjct: 120 SKWQGQVSERLQALSRRAGSSFANQSTSNRAQTAAVPTKLSNTTKKVLQK-------NPQ 172
Query: 1363 ARNQTNIAGSPNKANQENTSAYDTKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLLEMV 1184
+++ N SP K +Q + YDTKLVEMINTAIVDRSPSV+WDDV GLEKAKQ+L+EMV
Sbjct: 173 RKDEVNKVQSP-KPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGLEKAKQALMEMV 231
Query: 1183 ILPTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGE 1004
ILPTKR+DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNV+A+SLTSKWVGE
Sbjct: 232 ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGE 291
Query: 1003 AEKLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLVQFDGVSSNPDD 824
AEKLVRTLFMVA+SRQPSVIF+DEIDSIMSTR NEN+ASRRLKSEFL+QFDGV+SNPDD
Sbjct: 292 AEKLVRTLFMVAVSRQPSVIFIDEIDSIMSTRTTNENEASRRLKSEFLIQFDGVTSNPDD 351
Query: 823 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLV 644
+VIVIGATNKPQELDDAVLRRLVKRIYVPLP+ENVR+ KGQAFSLP RDLE LV
Sbjct: 352 IVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLV 411
Query: 643 KETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYADFQIAMTVIRPSLQKS 464
+ETEGYSGSDLQALCEEAAMMPIRELGSNILTV ANQVR LRY DF+ AM VIRPSL KS
Sbjct: 412 RETEGYSGSDLQALCEEAAMMPIRELGSNILTVKANQVRGLRYEDFKKAMAVIRPSLNKS 471
Query: 463 KWDELEKWNQEFGSS 419
KW+ELE+WN+EFGS+
Sbjct: 472 KWEELERWNEEFGSN 486
>ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]
Length = 491
Score = 650 bits (1677), Expect = 0.0
Identities = 349/500 (69%), Positives = 400/500 (80%), Gaps = 16/500 (3%)
Frame = -3
Query: 1870 MSLFKGFFDSLSDIFATPPSQNINPT------------MENSPVGIGTP--VSNERTAYK 1733
MS +G DS + IF P + N + T ME SP P VSNER AYK
Sbjct: 1 MSFLQGIVDSFNSIFI-PDNNNYHDTNSPSSSSSSTNRMEASPPPPPLPPSVSNERVAYK 59
Query: 1732 LKGYFELAKEEIAKAVRAEEWGLAEDAVSHYKNAQRILIEAKDTRPPSFISPSEQEKVKS 1553
LKGYF+LA +EIAK VRAEEWGL +DA+ HY+NA IL+EA T PS+I+ SEQ+KV+S
Sbjct: 60 LKGYFDLATQEIAKGVRAEEWGLIDDALLHYRNAHSILLEANSTPVPSYITSSEQQKVQS 119
Query: 1552 YHQKITKWQGQVSERLQVLSQRTLGTSSTSKTTIAQQPKSV--KVSTARKDLVQKPSVSG 1379
Y +KI+KWQ QVSERLQ L++R +S+ T+ Q +V K S+ RK+++QKP
Sbjct: 120 YREKISKWQSQVSERLQTLARRAGSSSANQSTSKLAQTVAVPIKPSSTRKNVLQKPP--- 176
Query: 1378 RNNVSARNQTNIAGSPNKANQENTSAYDTKLVEMINTAIVDRSPSVKWDDVAGLEKAKQS 1199
Q N GSP K++Q + YD KLVEMINTAIVDRSPSV+W+DVAGLEKAKQ+
Sbjct: 177 ----QRTGQVNKVGSP-KSSQGSGVNYDDKLVEMINTAIVDRSPSVRWEDVAGLEKAKQA 231
Query: 1198 LLEMVILPTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTS 1019
L+EMVILPTKR+DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES+ATFFNV+A+SLTS
Sbjct: 232 LMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTS 291
Query: 1018 KWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLVQFDGVS 839
KWVGE EKLVRTLFMVAISRQPSVIF+DEIDSIMSTRLANENDASRRLKSEFL+QFDGV+
Sbjct: 292 KWVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVT 351
Query: 838 SNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRD 659
SNPDD+VIVIGATNKPQELDDAVLRRLVKRIY+PLPDENVR+ KGQAFSLP RD
Sbjct: 352 SNPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRKLLLKHKLKGQAFSLPSRD 411
Query: 658 LESLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYADFQIAMTVIRP 479
LE LVKETEGYSGSDLQALCEEAAMMPIRELG++ILTV ANQVR LRY DF+ AM IRP
Sbjct: 412 LERLVKETEGYSGSDLQALCEEAAMMPIRELGADILTVKANQVRGLRYEDFKKAMATIRP 471
Query: 478 SLQKSKWDELEKWNQEFGSS 419
SL KSKW+ELE+WN++FGS+
Sbjct: 472 SLNKSKWEELERWNEDFGSN 491
>ref|NP_001242287.1| uncharacterized protein LOC100786789 [Glycine max]
gi|255636469|gb|ACU18573.1| unknown [Glycine max]
Length = 486
Score = 650 bits (1677), Expect = 0.0
Identities = 348/497 (70%), Positives = 397/497 (79%), Gaps = 13/497 (2%)
Frame = -3
Query: 1870 MSLFKGFFDSLSDIFA-----------TPPSQNINPTMENSPVGIGTPVSNERTAYKLKG 1724
MS +G DS + IF +P S + ME SP VSNER AYKLKG
Sbjct: 1 MSFLQGIIDSFNSIFTHDNNNNYHNTNSPSSSSSTNRMEASPP---PSVSNERVAYKLKG 57
Query: 1723 YFELAKEEIAKAVRAEEWGLAEDAVSHYKNAQRILIEAKDTRPPSFISPSEQEKVKSYHQ 1544
YF+LA +EIAK VRAEEWGL +DA+ HY+NA IL+EA T PS+I+ SEQ+KV+SY +
Sbjct: 58 YFDLATQEIAKGVRAEEWGLIDDALLHYRNAHSILLEANSTPVPSYITTSEQQKVQSYRE 117
Query: 1543 KITKWQGQVSERLQVLSQRTLGTSSTSKTTIAQQPKSVKVST--ARKDLVQKPSVSGRNN 1370
KI+KWQ QVSERLQ L++R +S+ T+ Q + + T RK+++QKP G
Sbjct: 118 KISKWQSQVSERLQTLARRAGSSSANQSTSKLGQTAAAPIKTLSTRKNVLQKPPQRG--- 174
Query: 1369 VSARNQTNIAGSPNKANQENTSAYDTKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLLE 1190
Q N GSP K++Q + YD KLVEMINTAIVDRSPSV+W+DVAGLEKAKQ+L+E
Sbjct: 175 ----GQVNKVGSP-KSSQASGVNYDNKLVEMINTAIVDRSPSVRWEDVAGLEKAKQALME 229
Query: 1189 MVILPTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWV 1010
MVILPTKR+DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES+ATFFNV+A+SLTSKWV
Sbjct: 230 MVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTSKWV 289
Query: 1009 GEAEKLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLVQFDGVSSNP 830
GEAEKLVRTLFMVAISRQPSVIF+DEIDSIMSTRLANENDASRRLKSEFL+QFDGV+SNP
Sbjct: 290 GEAEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNP 349
Query: 829 DDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLES 650
DD+VIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVR+ KGQAFSLP RDLE
Sbjct: 350 DDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRKLLLKHKLKGQAFSLPSRDLER 409
Query: 649 LVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYADFQIAMTVIRPSLQ 470
LVKETE YSGSDLQALCEEAAMMPIRELG +ILTV ANQVR LRY DF+ AMT+IR SL
Sbjct: 410 LVKETERYSGSDLQALCEEAAMMPIRELGVDILTVKANQVRGLRYEDFKKAMTIIRLSLN 469
Query: 469 KSKWDELEKWNQEFGSS 419
KSKW+ELE+WN+EFGS+
Sbjct: 470 KSKWEELERWNEEFGSN 486