BLASTX nr result

ID: Coptis23_contig00009032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009032
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC71556.1| hypothetical protein OsI_03909 [Oryza sativa Indi...   188   2e-45
ref|XP_002525696.1| set domain protein, putative [Ricinus commun...   187   3e-45
ref|NP_001151282.1| histone-lysine N-methyltransferase SUVR3 [Ze...   187   3e-45
ref|XP_002456414.1| hypothetical protein SORBIDRAFT_03g035910 [S...   186   5e-45
ref|XP_002319719.1| SET domain protein [Populus trichocarpa] gi|...   186   7e-45

>gb|EEC71556.1| hypothetical protein OsI_03909 [Oryza sativa Indica Group]
           gi|222619326|gb|EEE55458.1| hypothetical protein
           OsJ_03620 [Oryza sativa Japonica Group]
          Length = 187

 Score =  188 bits (477), Expect = 2e-45
 Identities = 89/117 (76%), Positives = 100/117 (85%)
 Frame = -3

Query: 353 FVGELLTTAEARCRQQKYDELAAGGKSPSALLVVREHLPSGKACLRVNIDATKVGNIARF 174
           + GELLTT EAR RQ  YDELA+ GK   AL+V+REHLPSGKACLRVNIDATKVGN+ARF
Sbjct: 57  YAGELLTTEEARRRQGLYDELASVGKLSPALIVIREHLPSGKACLRVNIDATKVGNVARF 116

Query: 173 INHACDGGNLLTVLVRNSGMLFPRLCFFTSRDVLEGEELVFSYGDVRLRPNGLRCYC 3
           INH+CDGGNL  VLVR+SG L PRLCFF +RD++EGEEL FSYGD RLRPNGL C+C
Sbjct: 117 INHSCDGGNLHPVLVRSSGSLLPRLCFFAARDIIEGEELTFSYGDARLRPNGLPCFC 173


>ref|XP_002525696.1| set domain protein, putative [Ricinus communis]
           gi|223534996|gb|EEF36679.1| set domain protein, putative
           [Ricinus communis]
          Length = 327

 Score =  187 bits (475), Expect = 3e-45
 Identities = 92/136 (67%), Positives = 107/136 (78%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 GWGHFCSGRYCYLNPFL--FVGELLTTAEARCRQQKYDELAAGGKSPSALLVVREHLPSG 231
           GWG F     C    F+  + GELLTT EAR RQ+ YDEL + G   SALLVVREHLPSG
Sbjct: 179 GWGLFADQFICQ-GQFVCEYAGELLTTKEARSRQKIYDELTSTGWFSSALLVVREHLPSG 237

Query: 230 KACLRVNIDATKVGNIARFINHACDGGNLLTVLVRNSGMLFPRLCFFTSRDVLEGEELVF 51
           KACLRVNIDAT++GN+ARFINH+CDGGNL T+LVR++G L PRLCFF SRD+ EGEEL F
Sbjct: 238 KACLRVNIDATRIGNVARFINHSCDGGNLSTMLVRSTGALLPRLCFFASRDIKEGEELTF 297

Query: 50  SYGDVRLRPNGLRCYC 3
           SYG++RLR  GLRC+C
Sbjct: 298 SYGEIRLRSKGLRCFC 313


>ref|NP_001151282.1| histone-lysine N-methyltransferase SUVR3 [Zea mays]
           gi|195645520|gb|ACG42228.1| histone-lysine
           N-methyltransferase SUVR3 [Zea mays]
           gi|414590238|tpg|DAA40809.1| TPA: putative SET-domain
           containing family protein [Zea mays]
          Length = 339

 Score =  187 bits (475), Expect = 3e-45
 Identities = 90/135 (66%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
 Frame = -3

Query: 404 GWG-HFCSGRYCYLNPFLFVGELLTTAEARCRQQKYDELAAGGKSPSALLVVREHLPSGK 228
           GWG H      C      + GE LTT EAR R + YDELA+GGK   AL+V+REHLPSGK
Sbjct: 191 GWGLHAAEALSCGQFVCEYAGEFLTTEEARRRHKVYDELASGGKLCPALIVIREHLPSGK 250

Query: 227 ACLRVNIDATKVGNIARFINHACDGGNLLTVLVRNSGMLFPRLCFFTSRDVLEGEELVFS 48
           ACLRVNIDAT+VGN+ARFINH+CDGGNL  VLVR+SG+L PRLCFF +RD++EGEEL FS
Sbjct: 251 ACLRVNIDATRVGNVARFINHSCDGGNLHPVLVRSSGLLLPRLCFFAARDIVEGEELTFS 310

Query: 47  YGDVRLRPNGLRCYC 3
           YGD R+RP GL C+C
Sbjct: 311 YGDARVRPKGLPCFC 325


>ref|XP_002456414.1| hypothetical protein SORBIDRAFT_03g035910 [Sorghum bicolor]
           gi|241928389|gb|EES01534.1| hypothetical protein
           SORBIDRAFT_03g035910 [Sorghum bicolor]
          Length = 339

 Score =  186 bits (473), Expect = 5e-45
 Identities = 87/117 (74%), Positives = 99/117 (84%)
 Frame = -3

Query: 353 FVGELLTTAEARCRQQKYDELAAGGKSPSALLVVREHLPSGKACLRVNIDATKVGNIARF 174
           + GE LTT EAR RQ+ YDELA+GG    AL+V+REHLPSGKACLRVNIDATKVGN+ARF
Sbjct: 209 YAGEFLTTEEARRRQKLYDELASGGNLSPALIVIREHLPSGKACLRVNIDATKVGNVARF 268

Query: 173 INHACDGGNLLTVLVRNSGMLFPRLCFFTSRDVLEGEELVFSYGDVRLRPNGLRCYC 3
           INH+CDGGNL  VLVR+SG L PRLCFF SRD++EGEEL FSYGD R+RP GL C+C
Sbjct: 269 INHSCDGGNLHPVLVRSSGSLLPRLCFFASRDIVEGEELTFSYGDARVRPKGLPCFC 325


>ref|XP_002319719.1| SET domain protein [Populus trichocarpa]
           gi|222858095|gb|EEE95642.1| SET domain protein [Populus
           trichocarpa]
          Length = 340

 Score =  186 bits (472), Expect = 7e-45
 Identities = 90/135 (66%), Positives = 107/135 (79%), Gaps = 2/135 (1%)
 Frame = -3

Query: 401 WGHFCSGRYCYLNPFL--FVGELLTTAEARCRQQKYDELAAGGKSPSALLVVREHLPSGK 228
           WG F     C    F+  + GELLTT EAR RQQ YDELA+ G+  SALLVVREHLPSGK
Sbjct: 193 WGLFAGQMICQ-GQFICEYAGELLTTEEARRRQQIYDELASSGQFSSALLVVREHLPSGK 251

Query: 227 ACLRVNIDATKVGNIARFINHACDGGNLLTVLVRNSGMLFPRLCFFTSRDVLEGEELVFS 48
           ACLR+NIDAT+ GN+ARFINH+CDGGNL TVLVR++G L PRLCFF SR++ EGEEL FS
Sbjct: 252 ACLRINIDATRTGNVARFINHSCDGGNLTTVLVRHTGSLLPRLCFFASRNIKEGEELTFS 311

Query: 47  YGDVRLRPNGLRCYC 3
           YG++R+R  GL+C+C
Sbjct: 312 YGEIRVRSKGLQCFC 326


Top