BLASTX nr result

ID: Coptis23_contig00009020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009020
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ05148.1| retrotransposon protein, partial [Oryza sativa In...    92   3e-17
gb|EEC75772.1| hypothetical protein OsI_12678 [Oryza sativa Indi...    91   1e-16
ref|NP_001173127.1| Os02g0701833 [Oryza sativa Japonica Group] g...    88   8e-16
gb|EEE57636.1| hypothetical protein OsJ_08058 [Oryza sativa Japo...    88   8e-16
gb|EEE56892.1| hypothetical protein OsJ_06543 [Oryza sativa Japo...    88   8e-16

>gb|AFJ05148.1| retrotransposon protein, partial [Oryza sativa Indica Group]
          Length = 142

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/88 (52%), Positives = 56/88 (63%)
 Frame = -2

Query: 273 DMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMPSALRSLFVTILVYCQPTG 94
           D+  V+G    TF+EA E+ GL+E D S+  CL EAS  +MPSALR LF TILV+C+ T 
Sbjct: 27  DLRTVSGTMYSTFREACEKRGLVETDKSHDDCLNEASTFQMPSALRRLFATILVFCEVTD 86

Query: 93  VRRLWDEFVMAMSEDYPSSNTTRVEVLH 10
           +R LWD    AMSEDY   NT    V H
Sbjct: 87  IRALWDNHKTAMSEDYSRGNTNTATVEH 114


>gb|EEC75772.1| hypothetical protein OsI_12678 [Oryza sativa Indica Group]
          Length = 1072

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/86 (52%), Positives = 55/86 (63%)
 Frame = -2

Query: 273  DMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMPSALRSLFVTILVYCQPTG 94
            D+  V+G    TF+EA E+ GL+E D S+  CL EAS  +MPSALR LF TILV+C+ T 
Sbjct: 956  DLRTVSGTMYSTFREACEKRGLVETDKSHDDCLNEASTFQMPSALRRLFATILVFCEVTD 1015

Query: 93   VRRLWDEFVMAMSEDYPSSNTTRVEV 16
            +R LWD    AMSEDY   NT    V
Sbjct: 1016 IRALWDNHKTAMSEDYSRGNTNTATV 1041


>ref|NP_001173127.1| Os02g0701833 [Oryza sativa Japonica Group]
            gi|255671190|dbj|BAH91856.1| Os02g0701833 [Oryza sativa
            Japonica Group]
          Length = 1582

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/86 (51%), Positives = 54/86 (62%)
 Frame = -2

Query: 273  DMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMPSALRSLFVTILVYCQPTG 94
            D+  V+G    TF+EA E+ GL+E D S+  CL EA   +MPSALR LF TILV+C+ T 
Sbjct: 983  DLRTVSGTTYSTFREACEKRGLVETDKSHDDCLNEAFTFQMPSALRRLFATILVFCEVTD 1042

Query: 93   VRRLWDEFVMAMSEDYPSSNTTRVEV 16
            +R LWD    AMSEDY   NT    V
Sbjct: 1043 IRALWDNHKAAMSEDYSRGNTNPAAV 1068


>gb|EEE57636.1| hypothetical protein OsJ_08058 [Oryza sativa Japonica Group]
          Length = 1119

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/86 (51%), Positives = 54/86 (62%)
 Frame = -2

Query: 273  DMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMPSALRSLFVTILVYCQPTG 94
            D+  V+G    TF+EA E+ GL+E D S+  CL EA   +MPSALR LF TILV+C+ T 
Sbjct: 1002 DLRTVSGTTYSTFREACEKRGLVETDKSHDDCLNEAFTFQMPSALRRLFATILVFCEVTD 1061

Query: 93   VRRLWDEFVMAMSEDYPSSNTTRVEV 16
            +R LWD    AMSEDY   NT    V
Sbjct: 1062 IRALWDNHKAAMSEDYSRGNTNPAAV 1087


>gb|EEE56892.1| hypothetical protein OsJ_06543 [Oryza sativa Japonica Group]
          Length = 1162

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/86 (50%), Positives = 54/86 (62%)
 Frame = -2

Query: 273  DMLYVNGERCKTFKEAAERLGLLENDDSYRACLEEASRVKMPSALRSLFVTILVYCQPTG 94
            D+  ++G    TF+EA E+ GL+E D S+  CL EAS  +MPSALR LF TILV+C+ T 
Sbjct: 940  DLRTMSGTTYSTFREACEKRGLVETDKSHDDCLNEASTFQMPSALRQLFATILVFCEVTD 999

Query: 93   VRRLWDEFVMAMSEDYPSSNTTRVEV 16
            +R LWD     MSEDY   NT    V
Sbjct: 1000 IRALWDNHKATMSEDYSRGNTNPAAV 1025


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