BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009010
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica ...    89   5e-16
dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]          70   1e-10

>dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica var. dissecta]
          Length = 206

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/49 (87%), Positives = 45/49 (91%)
 Frame = +1

Query: 58  EWDNSIERKIQETMPKENLNDWETVASEGKSSGAPIDARERHKLAERER 204
           E +NSI RKIQETMP E LNDWETV+SEGKSSGAPIDARERHKLAERER
Sbjct: 13  EXNNSIXRKIQETMPIETLNDWETVSSEGKSSGAPIDARERHKLAERER 61


>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +1

Query: 97  MPKENLNDWETVASEGKSSGAPIDARERHKLAERER 204
           MP E LNDWETV+SEGKSSGAPIDARERHKLAERER
Sbjct: 1   MPIETLNDWETVSSEGKSSGAPIDARERHKLAERER 36