BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009009
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica ...    94   9e-18
dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]          74   1e-11

>dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica var. dissecta]
          Length = 206

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/61 (81%), Positives = 50/61 (81%)
 Frame = -2

Query: 183 SASSVAIFXXXXXXXXXXERKIQETMPIENLNDWETVSSEGKSSGAPIDARERHKLAERE 4
           SASSVAIF           RKIQETMPIE LNDWETVSSEGKSSGAPIDARERHKLAERE
Sbjct: 1   SASSVAIFSISIEXNNSIXRKIQETMPIETLNDWETVSSEGKSSGAPIDARERHKLAERE 60

Query: 3   R 1
           R
Sbjct: 61  R 61


>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -2

Query: 108 MPIENLNDWETVSSEGKSSGAPIDARERHKLAERER 1
           MPIE LNDWETVSSEGKSSGAPIDARERHKLAERER
Sbjct: 1   MPIETLNDWETVSSEGKSSGAPIDARERHKLAERER 36