BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009006
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   236   6e-60
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   216   5e-54
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   216   6e-54
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   204   2e-50
ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195...   191   1e-46

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  236 bits (601), Expect = 6e-60
 Identities = 120/193 (62%), Positives = 143/193 (74%)
 Frame = +2

Query: 221 LTKTMPFTPDAAVCRLLLSACAIHGETEMASEMSQKLLEKNSRDDSAYAILAIVHAASKS 400
           +  TMPF PDAAV R LLS+CA+HG  +MA  M ++L+E + +DDSAY I+A V A +  
Sbjct: 372 IAMTMPFEPDAAVWRALLSSCAMHGAADMAWAMGRRLMELDPQDDSAYVIVANVLATNGR 431

Query: 401 WDKVADVRKMMKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRK 580
           WD+VA+VRKMMK   V+KE GRSWIEVRG+VH F +GD RHER+ E+Y KL ELME I +
Sbjct: 432 WDEVAEVRKMMKDRMVKKEGGRSWIEVRGKVHVFLAGDRRHERSHEIYAKLVELMEKIEE 491

Query: 581 LGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLTICKDCH 760
           LGYKE               + LWYHSEKLAVAFGVVS AAPPGKALR+VKNL ICKDCH
Sbjct: 492 LGYKE-----------GVKKETLWYHSEKLAVAFGVVSDAAPPGKALRIVKNLRICKDCH 540

Query: 761 EALKYMSIVIERE 799
           EA KY+S V+ERE
Sbjct: 541 EAFKYISCVVERE 553


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  216 bits (550), Expect = 5e-54
 Identities = 111/190 (58%), Positives = 135/190 (71%)
 Frame = +2

Query: 230 TMPFTPDAAVCRLLLSACAIHGETEMASEMSQKLLEKNSRDDSAYAILAIVHAASKSWDK 409
           TMP  PDAAV R LLS CA  GE + A  M++++LE    DD AY  +A V +++  WD 
Sbjct: 362 TMPIEPDAAVWRALLSVCAYRGEADKAWSMAKRVLELEPNDDYAYVSVANVLSSAGRWDD 421

Query: 410 VADVRKMMKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGY 589
           VA++RKMMK  RV+K+ GRSWIEV+GEVH F +GD +HER+KE+Y KL ELM  I KLGY
Sbjct: 422 VAELRKMMKDRRVKKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGY 481

Query: 590 KEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLTICKDCHEAL 769
           +             +  +ALWYHSEKLAVAFGV+ G APPGK LR+VKNL ICKDCHEA 
Sbjct: 482 E-------------KRKEALWYHSEKLAVAFGVLCGPAPPGKPLRIVKNLRICKDCHEAF 528

Query: 770 KYMSIVIERE 799
           KYM+ VIERE
Sbjct: 529 KYMTRVIERE 538


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  216 bits (549), Expect = 6e-54
 Identities = 110/190 (57%), Positives = 137/190 (72%)
 Frame = +2

Query: 230 TMPFTPDAAVCRLLLSACAIHGETEMASEMSQKLLEKNSRDDSAYAILAIVHAASKSWDK 409
           TMPF PDAAV R LLS CA  GE + A  M++++LE    DD AY  +A V +++  WD 
Sbjct: 362 TMPFEPDAAVWRALLSVCAYRGEADKAWCMAKRVLELEPHDDYAYVSVANVLSSAGRWDD 421

Query: 410 VADVRKMMKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGY 589
           VA++RKMMK  RV+K+ GRSWIEV+GEVH F +GD +HER+KE+Y KL ELM  I KLGY
Sbjct: 422 VAELRKMMKDRRVKKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGY 481

Query: 590 KEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLTICKDCHEAL 769
           +             +  ++LWYHSEKLAVAFGV+ G+APPGK LR+VKNL ICKDCHEA 
Sbjct: 482 E-------------KRKESLWYHSEKLAVAFGVLCGSAPPGKPLRIVKNLRICKDCHEAF 528

Query: 770 KYMSIVIERE 799
           KYM+ V+ERE
Sbjct: 529 KYMTRVLERE 538


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  204 bits (518), Expect = 2e-50
 Identities = 101/190 (53%), Positives = 133/190 (70%)
 Frame = +2

Query: 230 TMPFTPDAAVCRLLLSACAIHGETEMASEMSQKLLEKNSRDDSAYAILAIVHAASKSWDK 409
           TMPF PD AV R LLS+ A HG  +MA  M+++LLE N  DDSAY I++   + +  W++
Sbjct: 371 TMPFVPDEAVWRALLSSSASHGAGDMAWTMAKRLLELNQHDDSAYVIVSNALSVAARWEE 430

Query: 410 VADVRKMMKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGY 589
           VA VRK+MK   V+K  G+SWIEVRGE H F +GD  HER +E+  KL+EL+  I KLGY
Sbjct: 431 VALVRKLMKERHVKKISGKSWIEVRGEAHVFLAGDRNHERAEEMNAKLKELVGEIEKLGY 490

Query: 590 KEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLTICKDCHEAL 769
             V    LH +   E  +AL YHSEKLA+A+G+++G APPGKALR++KNL IC+DCH   
Sbjct: 491 VPVCSETLHKVGEKERKEALLYHSEKLALAYGILTGVAPPGKALRIIKNLRICRDCHLFF 550

Query: 770 KYMSIVIERE 799
           KY S V+++E
Sbjct: 551 KYASRVLKKE 560


>ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195614038|gb|ACG28849.1|
           vegetative storage protein [Zea mays]
          Length = 563

 Score =  191 bits (486), Expect = 1e-46
 Identities = 97/189 (51%), Positives = 125/189 (66%)
 Frame = +2

Query: 230 TMPFTPDAAVCRLLLSACAIHGETEMASEMSQKLLEKNSRDDSAYAILAIVHAASKSWDK 409
           TMP  PDAAV R LL  C +H   +MA  M Q+LLE N +DDSAY +LA V++ +   D+
Sbjct: 364 TMPCKPDAAVWRTLLMGCVVHRRVDMAESMGQRLLEINPKDDSAYVMLANVYSTAGKTDE 423

Query: 410 VADVRKMMKVGRVRKEIGRSWIEVRGEVHEFFSGDTRHERTKEVYDKLEELMEAIRKLGY 589
            A+    M+   VRKE GRSWIEVRG VH F + + RHE+  E+YDKL EL++ + KLGY
Sbjct: 424 EAEAWTAMRDHGVRKEGGRSWIEVRGLVHVFVANERRHEQLLEIYDKLHELIQEVEKLGY 483

Query: 590 KEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRVVKNLTICKDCHEAL 769
           KE  +              LW+HSE+LA+A+G++SGAAP GK LR+VKNL IC  CHE  
Sbjct: 484 KEADE-------------RLWHHSERLALAYGLISGAAPSGKVLRIVKNLRICAHCHEFF 530

Query: 770 KYMSIVIER 796
           KY S+VI+R
Sbjct: 531 KYASMVIDR 539