BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009004
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517246.1| chromatin assembly factor I P60 subunit, put...   184   1e-44
ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   171   1e-40
ref|NP_974992.1| transducin/WD40 domain-containing protein [Arab...   164   1e-38
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   164   1e-38
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   164   2e-38

>ref|XP_002517246.1| chromatin assembly factor I P60 subunit, putative [Ricinus
           communis] gi|223543617|gb|EEF45146.1| chromatin assembly
           factor I P60 subunit, putative [Ricinus communis]
          Length = 455

 Score =  184 bits (467), Expect = 1e-44
 Identities = 100/179 (55%), Positives = 117/179 (65%)
 Frame = +2

Query: 2   VAVRFCPVVFNLRGSNSGKFFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAIT 181
           VAVRFCP+ F+LR S+S  FF LP+R IFAVATLNSLYIYDTES PPIAI AGLHYAAIT
Sbjct: 284 VAVRFCPMAFSLRESHSAGFFKLPYRLIFAVATLNSLYIYDTESAPPIAILAGLHYAAIT 343

Query: 182 DIAWSSNAKYVALSSQDGYCTLVEFESGELGSPISXXXXXXXXXXXXXXVISLEPEDMEI 361
           DIAWSSNA+Y+A+SSQDGYCTLVEFE  ELG PI+              +I  +P+D+ I
Sbjct: 344 DIAWSSNAQYLAVSSQDGYCTLVEFEINELGLPITLGEHKNDIVEENKSLIVEKPDDIII 403

Query: 362 TPEVGNAVETNPSEGNDEIQTSPPNTIRTSDANKPATNSTVTPISNKPVKRRITPMVID 538
                ++  T P     E++      +  S  N        TPIS KP KRRITPM ID
Sbjct: 404 ETHTDDS-STAPESRETEVEKHEKKQVLPSPVN--------TPISTKPAKRRITPMAID 453


>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
           gi|296088566|emb|CBI37557.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  171 bits (433), Expect = 1e-40
 Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
 Frame = +2

Query: 2   VAVRFCPVVFNLRGSNSGKFFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAIT 181
           +AVRFCP+ F+L+GSNS  FF LP+R IFAVA+LNSLYIYDTES+PPIAI AGLHYAAIT
Sbjct: 285 IAVRFCPMAFHLQGSNSAGFFKLPYRLIFAVASLNSLYIYDTESIPPIAILAGLHYAAIT 344

Query: 182 DIAWSSNAKYVALSSQDGYCTLVEFESGELGSPISXXXXXXXXXXXXXXVISLEPEDMEI 361
           DIAWS + KY+A+SSQDGY TLVEFE+GELGSP                 +  +P+ ME+
Sbjct: 345 DIAWSHDGKYLAISSQDGYSTLVEFENGELGSPFLLSEVESVSGDEKKSPVQ-QPKAMEV 403

Query: 362 ---TPEVGNAVETNPSE-GNDEIQTSPPNTIRTSDANKPATNSTVTPISNKPVKRRITPM 529
              T  V  +V++   E G ++++ + PN           ++ST TP   KP KRRITP+
Sbjct: 404 EETTQVVTVSVDSRKREVGRNDLKEASPNA---------TSSSTSTP---KPAKRRITPV 451

Query: 530 VID 538
            I+
Sbjct: 452 SIE 454


>ref|NP_974992.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332010545|gb|AED97928.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  164 bits (415), Expect = 1e-38
 Identities = 97/210 (46%), Positives = 118/210 (56%), Gaps = 31/210 (14%)
 Frame = +2

Query: 2   VAVRFCPVVFNLRGSNSGK-FFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAI 178
           V VRFCPV F LRGS+S + FF LP+R +FA+ATLNS+YIYDTE V PIA+ AGLHYAAI
Sbjct: 226 VVVRFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAI 285

Query: 179 TDIAWSSNAKYVALSSQDGYCTLVEFESGELGSPISXXXXXXXXXXXXXXVISLEPEDME 358
           TDI WS NA Y+ALSSQDGYCTLVEFE  ELG  +S                  +  D+E
Sbjct: 286 TDITWSPNASYLALSSQDGYCTLVEFEDKELGEAVSISVGKKPVDGEE------KKHDLE 339

Query: 359 ITPEVGNAVETNPSEG--------NDEIQTSPPNTIRT---------------------- 448
              E+    ET P E         N+E +   P+ I T                      
Sbjct: 340 KGDEL--MTETTPDESKKQAELEQNEESKQPLPSKITTDGKEKEHIMQKTDDEVMTETRH 397

Query: 449 SDANKPATNSTVTPISNKPVKRRITPMVID 538
            + N+P  +   TP+SNKP ++RITPM ID
Sbjct: 398 EEENQPLQSKVNTPVSNKPARKRITPMAID 427


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS2;
           Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
           homolog; AltName: Full=Protein FASCIATA 2
           gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
           gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
           gi|332010547|gb|AED97930.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  164 bits (415), Expect = 1e-38
 Identities = 97/210 (46%), Positives = 118/210 (56%), Gaps = 31/210 (14%)
 Frame = +2

Query: 2   VAVRFCPVVFNLRGSNSGK-FFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAI 178
           V VRFCPV F LRGS+S + FF LP+R +FA+ATLNS+YIYDTE V PIA+ AGLHYAAI
Sbjct: 285 VVVRFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAI 344

Query: 179 TDIAWSSNAKYVALSSQDGYCTLVEFESGELGSPISXXXXXXXXXXXXXXVISLEPEDME 358
           TDI WS NA Y+ALSSQDGYCTLVEFE  ELG  +S                  +  D+E
Sbjct: 345 TDITWSPNASYLALSSQDGYCTLVEFEDKELGEAVSISVGKKPVDGEE------KKHDLE 398

Query: 359 ITPEVGNAVETNPSEG--------NDEIQTSPPNTIRT---------------------- 448
              E+    ET P E         N+E +   P+ I T                      
Sbjct: 399 KGDEL--MTETTPDESKKQAELEQNEESKQPLPSKITTDGKEKEHIMQKTDDEVMTETRH 456

Query: 449 SDANKPATNSTVTPISNKPVKRRITPMVID 538
            + N+P  +   TP+SNKP ++RITPM ID
Sbjct: 457 EEENQPLQSKVNTPVSNKPARKRITPMAID 486


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  164 bits (414), Expect = 2e-38
 Identities = 100/209 (47%), Positives = 118/209 (56%), Gaps = 30/209 (14%)
 Frame = +2

Query: 2   VAVRFCPVVFNLRGSNSGK-FFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAI 178
           V VRFCPV F LRGS+S + FF LP+R +FA+ATLNS+YIYDTE V PIA+ AGLHYAAI
Sbjct: 285 VVVRFCPVAFKLRGSHSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAI 344

Query: 179 TDIAWSSNAKYVALSSQDGYCTLVEFESGELGS--PISXXXXXXXXXXXXXXVISLEPED 352
           TDI WS NA Y+ALSSQDGYCTLVEFE  ELG   PIS                 LE  D
Sbjct: 345 TDITWSPNASYLALSSQDGYCTLVEFEDNELGESIPISITVGRKPVDAEEKK-HDLEKAD 403

Query: 353 ---MEITPEV------------------------GNAVETNPSEGNDEIQTSPPNTIRTS 451
               E TP+V                        G   E    + +DE+ T      R  
Sbjct: 404 ELMTETTPDVSKKQAELQQNEENKQPLPSKITTDGEEKEHVMQKTDDEVMTE----TRHE 459

Query: 452 DANKPATNSTVTPISNKPVKRRITPMVID 538
           + N+P  +   TP+SNKP ++RITPM ID
Sbjct: 460 EENQPLQSKVNTPVSNKPARKRITPMAID 488