BLASTX nr result

ID: Coptis23_contig00009002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009002
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22180.3| unnamed protein product [Vitis vinifera]              100   3e-19
ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vini...   100   3e-19
ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|2...    99   9e-19
emb|CBI32075.3| unnamed protein product [Vitis vinifera]               93   8e-17
gb|AAC00575.1| Hypothetical protein [Arabidopsis thaliana]             86   1e-14

>emb|CBI22180.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  100 bits (250), Expect = 3e-19
 Identities = 79/238 (33%), Positives = 107/238 (44%), Gaps = 10/238 (4%)
 Frame = -2

Query: 769 MVTMLQIWFLLSVFF---FYVLPFISSQSNYPQNIETFFPLDSTTPPGNSPFSPPIDQSR 599
           M  ++Q   L+S+FF   F +L   S Q N P+NIETF+P      P N   +P I Q  
Sbjct: 1   MAAVIQPCPLISLFFVSLFSILHLSSCQPNSPRNIETFYPFRPPPNPTNPIPNPRISQLS 60

Query: 598 QPTISQGTPLAPSLLRKXXXXXXXXXXXXXXXACTLVIAGVXXXXXXXXXXXXXXQNNER 419
            P+    +  A +                   A T+V++G+                  +
Sbjct: 61  IPSSKSSSSYAVA------------KAVAVTAATTIVVSGLFFILFQKYTVARGRSQKGK 108

Query: 418 IE-------IVPHREFKEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLS 260
            +       +V H EF      F+G L GLIVDE GLD+LYW+KLE    K SF K+ L 
Sbjct: 109 NDPRGGGENVVSHIEFSR----FNGNLNGLIVDENGLDVLYWKKLEGDYRKNSFPKQALH 164

Query: 259 RPIGEYXXXXXXXXXXXXSIPIQEVPLLRGKSSNSSAHIRHEVEELNQISGLPWTSRT 86
               E             S PIQE+PLLRGKSS S   ++ EVE LN  S  P +S++
Sbjct: 165 NLKHEEKRMSRNGDGRAKSEPIQEIPLLRGKSSTSYDEVQEEVENLNWFSAPPPSSQS 222


>ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vinifera]
          Length = 819

 Score =  100 bits (250), Expect = 3e-19
 Identities = 79/238 (33%), Positives = 107/238 (44%), Gaps = 10/238 (4%)
 Frame = -2

Query: 769 MVTMLQIWFLLSVFF---FYVLPFISSQSNYPQNIETFFPLDSTTPPGNSPFSPPIDQSR 599
           M  ++Q   L+S+FF   F +L   S Q N P+NIETF+P      P N   +P I Q  
Sbjct: 1   MAAVIQPCPLISLFFVSLFSILHLSSCQPNSPRNIETFYPFRPPPNPTNPIPNPRISQLS 60

Query: 598 QPTISQGTPLAPSLLRKXXXXXXXXXXXXXXXACTLVIAGVXXXXXXXXXXXXXXQNNER 419
            P+    +  A +                   A T+V++G+                  +
Sbjct: 61  IPSSKSSSSYAVA------------KAVAVTAATTIVVSGLFFILFQKYTVARGRSQKGK 108

Query: 418 IE-------IVPHREFKEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLS 260
            +       +V H EF      F+G L GLIVDE GLD+LYW+KLE    K SF K+ L 
Sbjct: 109 NDPRGGGENVVSHIEFSR----FNGNLNGLIVDENGLDVLYWKKLEGDYRKNSFPKQALH 164

Query: 259 RPIGEYXXXXXXXXXXXXSIPIQEVPLLRGKSSNSSAHIRHEVEELNQISGLPWTSRT 86
               E             S PIQE+PLLRGKSS S   ++ EVE LN  S  P +S++
Sbjct: 165 NLKHEEKRMSRNGDGRAKSEPIQEIPLLRGKSSTSYDEVQEEVENLNWFSAPPPSSQS 222


>ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|222852588|gb|EEE90135.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 78/219 (35%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
 Frame = -2

Query: 769 MVTMLQIWFLLSVFFFY-VLPFISSQSNYPQNIETF--FPLDSTTPPGNSPFSPPIDQSR 599
           M  + Q W +L + FF  V+PF SSQS   QNIETF  FP+ S  PP  SP +PP   S 
Sbjct: 1   MAVIKQPWLVLHLMFFLSVIPFSSSQSISAQNIETFYPFPIPSPAPPLPSP-APPPKPST 59

Query: 598 QPTISQGTPLAPSLLRKXXXXXXXXXXXXXXXACTLVIAGVXXXXXXXXXXXXXXQNNER 419
            P+ +  +P AP  L                 A T V+A +              ++N  
Sbjct: 60  SPSPTILSPSAPGPLPSSSSNKNVVKAVAATAASTFVVATLLFFLIQRFVILPRRKSNGH 119

Query: 418 -------IEIVPHREFKEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLS 260
                    +VP      +F   +G +KGL+VDE GLD+LYWRKLE+   K SF +E   
Sbjct: 120 GAGSRGGQAVVPLPLPPSQFSRIEGNVKGLVVDENGLDVLYWRKLEEEDKKNSFVREERR 179

Query: 259 RPIGEYXXXXXXXXXXXXSIPIQEVPLLRGKSSNSSAHI 143
           R                 S PIQE+PLLRGKSS S   +
Sbjct: 180 R--------------NSKSEPIQEIPLLRGKSSTSEKKV 204


>emb|CBI32075.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 50/100 (50%), Positives = 60/100 (60%)
 Frame = -2

Query: 385 EFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKTSFRKEVLSRPIGEYXXXXXXXXXXXX 206
           EF  F+G LKGLIVDE GLD+LYW++LE G  K SFRKE L     E             
Sbjct: 110 EFSRFNGNLKGLIVDENGLDVLYWKQLEGGSRKNSFRKEALHNLKDEEKRMSRNGDQRAK 169

Query: 205 SIPIQEVPLLRGKSSNSSAHIRHEVEELNQISGLPWTSRT 86
             PIQE+PLLRGKSS S   ++ EVE LN+ S  P  S++
Sbjct: 170 PEPIQEIPLLRGKSSTSYDEVQEEVENLNRFSAPPPLSQS 209


>gb|AAC00575.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 820

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 74/219 (33%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
 Frame = -2

Query: 757 LQIWFLLSVFFFYVLPFISSQSNYPQNIETFFPLDSTTPPGNSP-FSPPIDQSRQPTISQ 581
           L + FL  + FF    F  SQS+ P+NIETFFP D+ TPP  SP  SPP + S   + S 
Sbjct: 11  LTLVFLTLILFFPNQSF--SQSDSPRNIETFFPNDTITPPVQSPVLSPPQNPSSSSSDSD 68

Query: 580 GTPLAPSLLRKXXXXXXXXXXXXXXXACTLVIAGVXXXXXXXXXXXXXXQ----NNERIE 413
              +  ++L                 A TL++A V                   N  +  
Sbjct: 69  RGNILRAVL--------------ITAASTLLVAAVFFFLVHKCRRRRNRVGGVDNTLQPP 114

Query: 412 IVPHREF---KEEFRSFDGTLKGLIVDEKGLDILYWRKLEDGQFKT---SFRKEVLSRPI 251
           + P  E    +E F  F G +KGLI+DE GLD+LYWRKL+  Q      SFRKE++    
Sbjct: 115 VPPLAEAALAREGFTRFGGNVKGLILDENGLDVLYWRKLQQSQRDNKGGSFRKEIIHGDD 174

Query: 250 GEYXXXXXXXXXXXXSIPIQEVPLLRGKSSNSSAHIRHE 134
            E               P+ E PLLRG+SS S + I ++
Sbjct: 175 EEKNVIYSKSKKKSG--PVTETPLLRGRSSTSHSVIHND 211


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