BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009000
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...    68   2e-16
ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac...    65   1e-14
gb|ACU23171.1| unknown [Glycine max]                                   65   1e-14
ref|XP_002302651.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-13
ref|XP_002320882.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-13

>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 264

 Score = 67.8 bits (164), Expect(2) = 2e-16
 Identities = 36/56 (64%), Positives = 39/56 (69%), Gaps = 8/56 (14%)
 Frame = +3

Query: 720 NFSKVLGRVVSVEYALRDDGERGDRHESPRRGYEGRGDSPY--------GRSRSPV 863
           N SK+L RVVSVEYALRDDGERGD ++SPRRG   R  SPY        GR RSPV
Sbjct: 146 NMSKILDRVVSVEYALRDDGERGDNYDSPRRGGYERSPSPYHRRPSPDYGRPRSPV 201



 Score = 45.4 bits (106), Expect(2) = 2e-16
 Identities = 20/34 (58%), Positives = 22/34 (64%)
 Frame = +2

Query: 980  DYGRARSPDYGRGRSPVYDKYNGPSYNGGKSSEY 1081
            DYGR RSPDYGR RSP Y +   P Y   +S EY
Sbjct: 217  DYGRHRSPDYGRRRSPDYGRRKSPDYGKPRSPEY 250


>ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 259

 Score = 65.5 bits (158), Expect(2) = 1e-14
 Identities = 38/58 (65%), Positives = 41/58 (70%), Gaps = 10/58 (17%)
 Frame = +3

Query: 720 NFSKVLGRVVSVEYALRDDGERGDRHESPRR--GYEGRGDSPY--------GRSRSPV 863
           N SK+L RVVSVEYALRDDGERGD ++SPRR  GYE R  SPY        GR RSPV
Sbjct: 146 NMSKILDRVVSVEYALRDDGERGDNYDSPRRRGGYE-RSPSPYHRRPSPDYGRPRSPV 202



 Score = 41.6 bits (96), Expect(2) = 1e-14
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +2

Query: 980  DYGRARSPDYGRGRSPVYDKYNGPSYNGGKS 1072
            DYGR RSPDYGR RSP Y K   P Y   +S
Sbjct: 218  DYGRHRSPDYGRRRSPDYGKPRSPEYGRYRS 248


>gb|ACU23171.1| unknown [Glycine max]
          Length = 259

 Score = 65.5 bits (158), Expect(2) = 1e-14
 Identities = 38/58 (65%), Positives = 41/58 (70%), Gaps = 10/58 (17%)
 Frame = +3

Query: 720 NFSKVLGRVVSVEYALRDDGERGDRHESPRR--GYEGRGDSPY--------GRSRSPV 863
           N SK+L RVVSVEYALRDDGERGD ++SPRR  GYE R  SPY        GR RSPV
Sbjct: 146 NMSKILDRVVSVEYALRDDGERGDNYDSPRRRGGYE-RSPSPYHRRPSPDYGRPRSPV 202



 Score = 41.6 bits (96), Expect(2) = 1e-14
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +2

Query: 980  DYGRARSPDYGRGRSPVYDKYNGPSYNGGKS 1072
            DYGR RSPDYGR RSP Y K   P Y   +S
Sbjct: 218  DYGRHRSPDYGRRRSPDYGKPRSPEYGRYRS 248


>ref|XP_002302651.1| predicted protein [Populus trichocarpa] gi|222844377|gb|EEE81924.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 64.3 bits (155), Expect(2) = 2e-13
 Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 10/58 (17%)
 Frame = +3

Query: 720 NFSKVLGRVVSVEYALRDDGERGDRHESPRRG-YEGRGDSP---------YGRSRSPV 863
           + +K+L RVVSVEYALRDD ERGDR++SPRRG Y GR  SP         Y R+RSPV
Sbjct: 149 HMTKILDRVVSVEYALRDDSERGDRYDSPRRGSYNGRSPSPVYRRRPSPDYVRARSPV 206



 Score = 39.3 bits (90), Expect(2) = 2e-13
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 980  DYGRARSPDYGRGRSPVYDKYNGPSYNGGKSSEY 1081
            DY RARSP Y +   PVYD+   P Y   +S EY
Sbjct: 198  DYVRARSPVYDKYNGPVYDRRQSPDYGRNRSPEY 231


>ref|XP_002320882.1| predicted protein [Populus trichocarpa] gi|222861655|gb|EEE99197.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 64.7 bits (156), Expect(2) = 4e-13
 Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 10/58 (17%)
 Frame = +3

Query: 720 NFSKVLGRVVSVEYALRDDGERGDRHESPRRG-YEGRGDSP---------YGRSRSPV 863
           + +K+L RVVSVEYALRDD ERGDR++SPRRG Y GR  SP         YGR  SPV
Sbjct: 150 HMTKILDRVVSVEYALRDDSERGDRYDSPRRGSYYGRSPSPAHHRRPNPDYGRGHSPV 207



 Score = 37.4 bits (85), Expect(2) = 4e-13
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 980  DYGRARSPDYGRGRSPVYDKYNGPSYNGGKSSEY 1081
            DYGR  SP Y +   PV+D+   P Y   +S EY
Sbjct: 199  DYGRGHSPVYDKYNGPVHDRRRSPDYGRNRSPEY 232