BLASTX nr result

ID: Coptis23_contig00008993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008993
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|2...   186   4e-45
ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|2...   185   9e-45
emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   185   9e-45
ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...   179   5e-43
ref|XP_002519404.1| conserved hypothetical protein [Ricinus comm...   164   1e-38

>ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|222854981|gb|EEE92528.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score =  186 bits (472), Expect = 4e-45
 Identities = 112/236 (47%), Positives = 139/236 (58%), Gaps = 3/236 (1%)
 Frame = +2

Query: 2   KWALQAVSVPXXXXXXXXXXXXXXDSRMTLLQNPPQMLETK--LSVCVEEHDKLTCCAEC 175
           +WALQAVSVP                  ++  NP  +LETK  ++   EE DK TCC EC
Sbjct: 309 QWALQAVSVPSGGLGLSLHAS-------SISNNPSHVLETKPFINNGKEEQDKFTCCQEC 361

Query: 176 TSNFEKDAVFLKSGQQKASSLFLKDMDKGSTNLPYWLQPNKNDSHYKDELIELRRKWNRL 355
           TSN+EK+   LKSGQQK              +L  WLQP   +S+ KDEL+ELRRKWNRL
Sbjct: 362 TSNYEKEVQLLKSGQQK--------------HLLPWLQPQGTNSNQKDELVELRRKWNRL 407

Query: 356 CHSLHHP-RPSQIHSPPLSFDNQSLSNKSYNFASPYSWWPAGSQNSTFPQSNSISVTEST 532
           CHSLHH  R S ++S    F+NQS+  K+Y+FAS Y WWP  SQNS FP SNSIS  +S 
Sbjct: 408 CHSLHHQGRQSNLNS--TLFNNQSMLGKNYSFASSYPWWP--SQNSFFPDSNSISFADSA 463

Query: 533 PRPDRSTDFVLKFGNQQARSNGFDFGNGTSKDHLNGLTLDSLLNKENRDENITLAL 700
            +P+ S+  V KF  QQ+    F+F NG  K+      LDSL N E ++  ITLAL
Sbjct: 464 LKPNYSSSNVPKFRRQQSCHIEFNFVNGFQKNEPEEPNLDSLKNSEGKEVKITLAL 519


>ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|222866690|gb|EEF03821.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score =  185 bits (469), Expect = 9e-45
 Identities = 112/236 (47%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
 Frame = +2

Query: 2   KWALQAVSVPXXXXXXXXXXXXXXDSRMTLLQNPPQMLETK--LSVCVEEHDKLTCCAEC 175
           +WALQAVSVP               SR+    NP  +LETK  ++   EE D+ TCC EC
Sbjct: 310 QWALQAVSVPSGGLGLSLHP-----SRIKFSHNPSLVLETKPFINDGKEEEDRFTCCPEC 364

Query: 176 TSNFEKDAVFLKSGQQKASSLFLKDMDKGSTNLPYWLQPNKNDSHYKDELIELRRKWNRL 355
            SN+EK+   LKSGQQK              +LP WLQP   +S  KDE +ELRRKWNRL
Sbjct: 365 NSNYEKEVHSLKSGQQK--------------HLPPWLQPQGTNSIQKDEFVELRRKWNRL 410

Query: 356 CHSLHHP-RPSQIHSPPLSFDNQSLSNKSYNFASPYSWWPAGSQNSTFPQSNSISVTEST 532
           CHSLHH  R S ++S    + NQSL  K+++FAS Y WWP  SQNS FP SNSIS  +S 
Sbjct: 411 CHSLHHQGRQSNLNST--LYSNQSLLGKNFSFASSYPWWP--SQNSFFPDSNSISFGDSA 466

Query: 533 PRPDRSTDFVLKFGNQQARSNGFDFGNGTSKDHLNGLTLDSLLNKENRDENITLAL 700
            +P+ S+  V KF  QQ+    F+F NGT K+      LDSL N E ++  ITLAL
Sbjct: 467 LKPNYSSSCVPKFRRQQSCHVEFNFVNGTQKNEPGEPNLDSLKNTEGKEVKITLAL 522


>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  185 bits (469), Expect = 9e-45
 Identities = 105/233 (45%), Positives = 129/233 (55%)
 Frame = +2

Query: 2    KWALQAVSVPXXXXXXXXXXXXXXDSRMTLLQNPPQMLETKLSVCVEEHDKLTCCAECTS 181
            +WALQAVSVP              DSR         +LETK     EEHDKL+CCAECT+
Sbjct: 410  QWALQAVSVPSGGLGLSLHASSVHDSRSQ--NQAHHVLETKPFAAKEEHDKLSCCAECTA 467

Query: 182  NFEKDAVFLKSGQQKASSLFLKDMDKGSTNLPYWLQPNKNDSHYKDELIELRRKWNRLCH 361
            N+EK+    KSGQQK               LP WLQ +  ++  KD+L+ELRRKWNRLCH
Sbjct: 468  NYEKEVGLFKSGQQKL--------------LPSWLQAHGVEARQKDDLVELRRKWNRLCH 513

Query: 362  SLHHPRPSQIHSPPLSFDNQSLSNKSYNFASPYSWWPAGSQNSTFPQSNSISVTESTPRP 541
            SLH  R +Q H     F NQ+L  KSY++ S Y WWP  +QNS FP  NSIS T S  +P
Sbjct: 514  SLHQGRSNQNHLSSSMFSNQNLLGKSYSYTSSYPWWP--NQNSIFPDLNSISFTNSALKP 571

Query: 542  DRSTDFVLKFGNQQARSNGFDFGNGTSKDHLNGLTLDSLLNKENRDENITLAL 700
            + ++  V +F  QQ+    F FGN   K      +LD L   E +D  ITLAL
Sbjct: 572  NHASSLVPRFRRQQSCHIEFSFGNVMHKQQSVEPSLDCLKKTEGKDVKITLAL 624


>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score =  179 bits (454), Expect = 5e-43
 Identities = 104/244 (42%), Positives = 134/244 (54%), Gaps = 11/244 (4%)
 Frame = +2

Query: 2    KWALQAVSVPXXXXXXXXXXXXXXDS------RMTLLQNPPQ-----MLETKLSVCVEEH 148
            +WALQAVSVP              +       ++++  +  Q     +LETK     EEH
Sbjct: 410  QWALQAVSVPSGGLGLSLHASSLINKAEDHCEKVSVHDSRSQNQAHHVLETKPFAAKEEH 469

Query: 149  DKLTCCAECTSNFEKDAVFLKSGQQKASSLFLKDMDKGSTNLPYWLQPNKNDSHYKDELI 328
            DKL+CCAECT+N+EK+    KSGQQK               LP WLQ +  ++  KD+L+
Sbjct: 470  DKLSCCAECTANYEKEVGLFKSGQQKL--------------LPSWLQAHGVEARQKDDLV 515

Query: 329  ELRRKWNRLCHSLHHPRPSQIHSPPLSFDNQSLSNKSYNFASPYSWWPAGSQNSTFPQSN 508
            ELRRKWNRLCHSLH  R +Q H     F NQ+L  KSY++ S Y WWP  +QNS FP  N
Sbjct: 516  ELRRKWNRLCHSLHQGRSNQNHLSSSMFSNQNLLGKSYSYTSSYPWWP--NQNSIFPDLN 573

Query: 509  SISVTESTPRPDRSTDFVLKFGNQQARSNGFDFGNGTSKDHLNGLTLDSLLNKENRDENI 688
            SIS T S  +P+ ++  V +F  QQ+    F FGNG  K      +LD L   E +D  I
Sbjct: 574  SISFTNSALKPNHASSLVPRFRRQQSCHIEFSFGNGMHKQQSVEPSLDCLKKTEGKDVKI 633

Query: 689  TLAL 700
            TLAL
Sbjct: 634  TLAL 637


>ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
            gi|223541471|gb|EEF43021.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1008

 Score =  164 bits (416), Expect = 1e-38
 Identities = 106/238 (44%), Positives = 133/238 (55%), Gaps = 5/238 (2%)
 Frame = +2

Query: 2    KWALQAVSVPXXXXXXXXXXXXXXDSRMTLLQNPPQMLETK--LSVCVEEHDKLTCCAEC 175
            +WALQAVSVP              +SRMT  QNP Q+LETK  +S   +E DKLTCC EC
Sbjct: 396  EWALQAVSVPSGGLGLSLHGSSIHESRMTFNQNPSQVLETKPLISNSKDEQDKLTCCPEC 455

Query: 176  TSNFEKDAVFLKSGQQKASSLFLKDMDKGSTNLPYWLQPNKNDSHYKDELIELRRKWNRL 355
             S++EK+A  LKS QQK              NLP WL P    ++  +E  ELRRKWN L
Sbjct: 456  ISSYEKEAQVLKSVQQK--------------NLPPWLNPRGTTTNDMNEEAELRRKWNGL 501

Query: 356  CHSLHHPRPSQIHSPPLSF---DNQSLSNKSYNFASPYSWWPAGSQNSTFPQSNSISVTE 526
            C  LHH   +  ++   +F   +NQ L+ KSY   S Y  WP  SQN+ F  SNSIS T+
Sbjct: 502  CQGLHHQGRNTQNNLASTFCNNNNQGLTGKSY---SLYPRWP--SQNNIFQDSNSISFTD 556

Query: 527  STPRPDRSTDFVLKFGNQQARSNGFDFGNGTSKDHLNGLTLDSLLNKENRDENITLAL 700
            S  +PD ++ FV KF  QQ+    F FG+ T K   N   LDSL N + ++  ITLAL
Sbjct: 557  SALKPDFTSSFVPKFRRQQSCKIDFKFGDVTQKQQPN---LDSLKNTQGKEVKITLAL 611


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