BLASTX nr result

ID: Coptis23_contig00008984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008984
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]   622   e-176
ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...   619   e-175
ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ri...   610   e-172
ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus...   596   e-168
gb|ACE63260.1| histidine kinase 2 [Betula pendula]                    578   e-162

>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score =  622 bits (1604), Expect = e-176
 Identities = 331/473 (69%), Positives = 383/473 (80%), Gaps = 2/473 (0%)
 Frame = +3

Query: 3    VITLLVGHIFHAAINRIAKVEGDYHEMMELKIRAEAADVAKSQFLATVSHEIRTPMNGVL 182
            VITLLVGHIFHAAINRIAKVEGDY +MMELK+RAEAADVAKSQFLATVSHEIRTPMNGVL
Sbjct: 668  VITLLVGHIFHAAINRIAKVEGDYRQMMELKVRAEAADVAKSQFLATVSHEIRTPMNGVL 727

Query: 183  GMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRTVL 362
            GML+MLMD+ L+ANQ D+A+TAH+SGKDLISLINEVLDQAKIESGRLELE V FD R  L
Sbjct: 728  GMLKMLMDSGLDANQQDYAETAHASGKDLISLINEVLDQAKIESGRLELEAVPFDLRAAL 787

Query: 363  DNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHILV 539
            DNVLSLFS K+H+KGIELAVYIS  VPE VIGDPGRFRQIITNLVGNSIKFT ++GHI V
Sbjct: 788  DNVLSLFSGKSHEKGIELAVYISDQVPEFVIGDPGRFRQIITNLVGNSIKFTHDKGHIFV 847

Query: 540  SVHLADEVSSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGGYR 719
            SVHLADEV  P  ++DE+L+Q + ++ +  + SYNTLSG PVV+RWKSW+ F+ L     
Sbjct: 848  SVHLADEVVGPPDLRDEVLRQSLNIVHDSSNNSYNTLSGFPVVNRWKSWEKFKKLXCTDS 907

Query: 720  NEVSEMVGMLVTVEDAGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVDMM 899
             E + ++ +LVTVED GVGIP +AQSRIFMPFMQADSSTSRTYGGTGIGLSISK LVD+M
Sbjct: 908  MEETSIIKLLVTVEDTGVGIPSEAQSRIFMPFMQADSSTSRTYGGTGIGLSISKRLVDLM 967

Query: 900  GGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFRGFRALVVDGKSIRAE 1079
            GGEIGF SEPGTGSTFSF VAF  GET  ++TKQ        +F+G RALVVD +SIRAE
Sbjct: 968  GGEIGFESEPGTGSTFSFTVAFTKGETSLLDTKQQPHDPAGSEFQGLRALVVDCRSIRAE 1027

Query: 1080 VTKYHLQRLGIDVDIAISLTPICSHVSNVYHTSEKSRLHMVLVDKDGWDEETTLALPHLL 1259
            VT+YHLQRLGI VD   SL   CS++SN    S  + + MVLVDK+ WD+E  L   H+L
Sbjct: 1028 VTRYHLQRLGISVDKTFSLISACSYLSNNSDPSASTSVAMVLVDKEVWDKEAGLVFHHML 1087

Query: 1260 KELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFVDDVIMKPLRLSMLV 1415
            KEL  +   +  E  PKI LL T+ SS+E +E KSAGFVD+V+MKPLRLS+L+
Sbjct: 1088 KELRPNGTVEVQEKRPKIFLLDTSLSSAERNELKSAGFVDNVLMKPLRLSVLI 1140


>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score =  619 bits (1595), Expect = e-175
 Identities = 330/473 (69%), Positives = 382/473 (80%), Gaps = 2/473 (0%)
 Frame = +3

Query: 3    VITLLVGHIFHAAINRIAKVEGDYHEMMELKIRAEAADVAKSQFLATVSHEIRTPMNGVL 182
            VITLLVGHIFHAAINRIAKVEGDY +MMELK+RAEAADVAKSQFLATVSHEIRTPMNGVL
Sbjct: 629  VITLLVGHIFHAAINRIAKVEGDYRQMMELKVRAEAADVAKSQFLATVSHEIRTPMNGVL 688

Query: 183  GMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRTVL 362
            GML+MLMD+ L+ANQ D+A+TAH+SGKDLISLINEVLDQAKIESGRLELE V FD R  L
Sbjct: 689  GMLKMLMDSGLDANQQDYAETAHASGKDLISLINEVLDQAKIESGRLELEAVPFDLRAAL 748

Query: 363  DNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHILV 539
            DNVLSLFS K+H+KGIELAVYIS  VPE VIGDPGRFRQIITNLVGNSIKFT ++GHI V
Sbjct: 749  DNVLSLFSGKSHEKGIELAVYISDQVPEFVIGDPGRFRQIITNLVGNSIKFTHDKGHIFV 808

Query: 540  SVHLADEVSSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGGYR 719
            SVHLADEV  P  ++DE+L+Q + ++ +  + SYNTLSG PVV+RWKSW+ F+ L     
Sbjct: 809  SVHLADEVVGPPDLRDEVLRQSLNIVHDSSNNSYNTLSGFPVVNRWKSWEKFKKLSCTDS 868

Query: 720  NEVSEMVGMLVTVEDAGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVDMM 899
             E + ++ +LVTVED GVGIP +AQSRIFMPFMQADSSTSRTYGGTGIGLSISK LVD+M
Sbjct: 869  MEETSIIKLLVTVEDTGVGIPSEAQSRIFMPFMQADSSTSRTYGGTGIGLSISKRLVDLM 928

Query: 900  GGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFRGFRALVVDGKSIRAE 1079
            GGEIGF SEPGTGSTFSF VAF  GET  ++TKQ        +F+  RALVVD +SIRAE
Sbjct: 929  GGEIGFESEPGTGSTFSFTVAFTKGETSLLDTKQQPHDPAGSEFQELRALVVDCRSIRAE 988

Query: 1080 VTKYHLQRLGIDVDIAISLTPICSHVSNVYHTSEKSRLHMVLVDKDGWDEETTLALPHLL 1259
            VT+YHLQRLGI VD   SL   CS++SN    S  + + MVLVDK+ WD+E  L   H+L
Sbjct: 989  VTRYHLQRLGISVDKTFSLISACSYLSNNSDPSASTSVAMVLVDKEVWDKEAGLVFHHML 1048

Query: 1260 KELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFVDDVIMKPLRLSMLV 1415
            KEL  +   +  E  PKI LL T+ SS+E +E KSAGFVD+V+MKPLRLS+L+
Sbjct: 1049 KELRPNGTVEVQEKRPKIFLLDTSLSSAERNELKSAGFVDNVLMKPLRLSVLI 1101


>ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
            gi|223528678|gb|EEF30693.1| histidine kinase 1, 2, 3
            plant, putative [Ricinus communis]
          Length = 922

 Score =  610 bits (1574), Expect = e-172
 Identities = 328/472 (69%), Positives = 376/472 (79%), Gaps = 2/472 (0%)
 Frame = +3

Query: 3    VITLLVGHIFHAAINRIAKVEGDYHEMMELKIRAEAADVAKSQFLATVSHEIRTPMNGVL 182
            VITLLVGHIF+AAI+RIAKVE DY EMM LK+RAEAADVAKSQFLATVSHEIRTPMNGVL
Sbjct: 279  VITLLVGHIFYAAISRIAKVEEDYREMMMLKVRAEAADVAKSQFLATVSHEIRTPMNGVL 338

Query: 183  GMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRTVL 362
            GMLQMLMDTDL+ANQ+DFAQTAH+SGKDLISLINEVLDQAKIESGRLELE V FD R+VL
Sbjct: 339  GMLQMLMDTDLDANQMDFAQTAHASGKDLISLINEVLDQAKIESGRLELEAVSFDLRSVL 398

Query: 363  DNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHILV 539
            DN+LSLFS K+++KGIELA+Y+S  VPEVVIGDPGRFRQIITNLVGNS+KFT ++GHI V
Sbjct: 399  DNILSLFSGKSNEKGIELAIYVSSQVPEVVIGDPGRFRQIITNLVGNSVKFTRDKGHIFV 458

Query: 540  SVHLADEVSSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGGYR 719
            SVHLADEV S L V+D +LKQ + L+ +  +   NTLSG PVVDRWKSW +F+ L     
Sbjct: 459  SVHLADEVRSTLNVRDAVLKQGLNLVQDMQNEIDNTLSGCPVVDRWKSWANFKRLNSKDT 518

Query: 720  NEVSEMVGMLVTVEDAGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVDMM 899
             E SEM+ +LVTVED GVGIP DA SRIF PFMQADSSTSRTYGGTGIGLSISKCLVD+M
Sbjct: 519  MEESEMIRLLVTVEDTGVGIPLDAHSRIFSPFMQADSSTSRTYGGTGIGLSISKCLVDLM 578

Query: 900  GGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFRGFRALVVDGKSIRAE 1079
            GGEIGFVSEPGTGSTFSF  +FR G+  S++TK         + +G+RALV+D +SIRAE
Sbjct: 579  GGEIGFVSEPGTGSTFSFTASFRKGDLRSLDTKWQPYDPTGLELQGWRALVIDKRSIRAE 638

Query: 1080 VTKYHLQRLGIDVDIAISLTPICSHVSNVYHTSEKSRLHMVLVDKDGWDEETTLALPHLL 1259
            VT+YHLQRLGI  D+A SL   CS+ S   HTS  +   +VL+DKD W  ET  A   LL
Sbjct: 639  VTRYHLQRLGITADMASSLKSACSYQSGGRHTSAPADFGLVLIDKDAWHNETGFAFRQLL 698

Query: 1260 KELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFVDDVIMKPLRLSML 1412
            KE  Q+   +     PKI LLATT +  E  E  SAG VD++IMKPLRLS+L
Sbjct: 699  KESKQNGGTEMIIDLPKIFLLATTINPEERRELLSAGLVDNIIMKPLRLSVL 750


>ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222861954|gb|EEE99496.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 1234

 Score =  596 bits (1537), Expect = e-168
 Identities = 321/474 (67%), Positives = 378/474 (79%), Gaps = 3/474 (0%)
 Frame = +3

Query: 3    VITLLVGHIFHAAINRIAKVEGDYHEMMELKIRAEAADVAKSQFLATVSHEIRTPMNGVL 182
            VITLLVGHIFHAAINRIAKVE DY EMMELK RAEAADVAKSQFLATVSHEIRTPMNGVL
Sbjct: 593  VITLLVGHIFHAAINRIAKVEEDYREMMELKARAEAADVAKSQFLATVSHEIRTPMNGVL 652

Query: 183  GMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRTVL 362
            GMLQMLM+TDL+ NQ+D+A TAH+SGKDLI+LINEVLDQAKIESGRLELE V FD R+VL
Sbjct: 653  GMLQMLMETDLDVNQMDYANTAHTSGKDLIALINEVLDQAKIESGRLELEAVPFDLRSVL 712

Query: 363  DNVLSLFSSKAHDKGIE-LAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFT-EEGHIL 536
            DNVLSLFS K+++KGIE LAVY+S  +PEVVIGDPGRFRQIITNLVGNSIKFT ++GH+ 
Sbjct: 713  DNVLSLFSGKSNEKGIEKLAVYVSDRLPEVVIGDPGRFRQIITNLVGNSIKFTRDKGHVF 772

Query: 537  VSVHLADEVSSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGGY 716
            VSVHLADEV SPL  +D +LKQ +EL+ +     Y++LSG PVV+RWKSW+ F+      
Sbjct: 773  VSVHLADEVRSPLDARDAVLKQGLELVQDTSSKVYDSLSGFPVVNRWKSWEKFKKSSCID 832

Query: 717  RNEVSEMVGMLVTVEDAGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVDM 896
              +  EM+ +LVTVED GVGIP DAQ  IF PFMQADSSTSR YGGTGIGLSISKCLVD+
Sbjct: 833  SRDEPEMIRLLVTVEDTGVGIPEDAQGNIFTPFMQADSSTSRKYGGTGIGLSISKCLVDL 892

Query: 897  MGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFRGFRALVVDGKSIRA 1076
            MGGEIGFVSE G GSTFSF V+FR GE+ S++TK       V + RG RALV+D +S+RA
Sbjct: 893  MGGEIGFVSECGIGSTFSFIVSFRKGESTSLDTKWQPYDPAVLEVRGGRALVIDERSVRA 952

Query: 1077 EVTKYHLQRLGIDVDIAISLTPICSHVSNVYHTSEKSRLHMVLVDKDGWDEETTLALPHL 1256
            EVTKYHLQRLGI  D+A SL   C+++S+ Y TS  + L +VL+DKD WD+E+ +A  HL
Sbjct: 953  EVTKYHLQRLGITADVAPSLKSACAYLSSGYCTSIPADLPIVLIDKDAWDKESGIAFHHL 1012

Query: 1257 LKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFVDDVIMKPLRLSMLV 1415
            LK   ++          KI LLATT SS E  E K++G VD+V++KPLRLS+L+
Sbjct: 1013 LKMPKKNDGTDIQVDLSKIFLLATTISSDERLELKTSGLVDNVLVKPLRLSVLI 1066


>gb|ACE63260.1| histidine kinase 2 [Betula pendula]
          Length = 1260

 Score =  578 bits (1490), Expect = e-162
 Identities = 313/474 (66%), Positives = 370/474 (78%), Gaps = 4/474 (0%)
 Frame = +3

Query: 3    VITLLVGHIFHAAINRIAKVEGDYHEMMELKIRAEAADVAKSQFLATVSHEIRTPMNGVL 182
            VITLLVGHIF+AAI+RIAKVE DY +MMELK+RAEAADVAKSQFLATVSHEIRTPMNGVL
Sbjct: 624  VITLLVGHIFYAAISRIAKVEDDYRKMMELKVRAEAADVAKSQFLATVSHEIRTPMNGVL 683

Query: 183  GMLQMLMDTDLNANQLDFAQTAHSSGKDLISLINEVLDQAKIESGRLELETVQFDPRTVL 362
            GMLQMLMDT+L+A Q D+A+TAH+SGKDLISLINEVLD+AKIESGRLELE V FD R VL
Sbjct: 684  GMLQMLMDTELDAIQQDYAETAHASGKDLISLINEVLDRAKIESGRLELEAVPFDLRAVL 743

Query: 363  DNVLSLFSSKAHDKGIELAVYISGLVPEVVIGDPGRFRQIITNLVGNSIKFTEE-GHILV 539
            DNV SL S K++D  +ELAVY+S  VPEV+IGDPGRFRQIITNLVGNSIKFT + GHIL+
Sbjct: 744  DNVSSLLSGKSYDIRMELAVYVSNRVPEVIIGDPGRFRQIITNLVGNSIKFTRDTGHILI 803

Query: 540  SVHLADEVSSPLKVKDEMLKQEMELLWNGVHTSYNTLSGLPVVDRWKSWQSFQMLIGGYR 719
            SVHLADEV+    + DE+++Q +  +      +YNTLSG  VVDRWKSW+ F+ L  G R
Sbjct: 804  SVHLADEVNGGPDMMDEVMRQGLSSVHEMSDKTYNTLSGFRVVDRWKSWEHFKKL--GCR 861

Query: 720  N--EVSEMVGMLVTVEDAGVGIPRDAQSRIFMPFMQADSSTSRTYGGTGIGLSISKCLVD 893
            N  E  EM+ +LVTVED GVGIP +AQSRIF PFMQADSSTSRTYGGTGIGLSI KCLVD
Sbjct: 862  NSMEEPEMIKLLVTVEDTGVGIPLEAQSRIFTPFMQADSSTSRTYGGTGIGLSICKCLVD 921

Query: 894  MMGGEIGFVSEPGTGSTFSFAVAFRIGETDSVNTKQYRIQSPVPKFRGFRALVVDGKSIR 1073
            +MGGEIGFVSEPG GSTFSF   FR  E  + +TK  + +  + + RG RALV+D + IR
Sbjct: 922  LMGGEIGFVSEPGVGSTFSFTGLFRKVEVTTPDTKCQQYEPALSELRGLRALVIDKRIIR 981

Query: 1074 AEVTKYHLQRLGIDVDIAISLTPICSHVSNVYHTSEKSRLHMVLVDKDGWDEETTLALPH 1253
            AEVT+YHLQRLGI  DI  SL   CS++S+   TS  ++  MVL+DKD WD+ET+L+   
Sbjct: 982  AEVTRYHLQRLGISSDITFSLKSACSYLSSACDTSVSAKFSMVLIDKDVWDKETSLSFHL 1041

Query: 1254 LLKELYQSLRNKSSEYCPKIILLATT-SSSELDEFKSAGFVDDVIMKPLRLSML 1412
             LK+  Q+ R +     PKI LLAT+    E  E KSAG VD+V++KPLRL +L
Sbjct: 1042 SLKDHGQNSRTEIPINLPKIFLLATSIGQDEHTELKSAGVVDNVLIKPLRLGVL 1095


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