BLASTX nr result

ID: Coptis23_contig00008982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008982
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867574.1| hypothetical protein ARALYDRAFT_913938 [Arab...   264   2e-68
ref|XP_002514174.1| conserved hypothetical protein [Ricinus comm...   264   2e-68
ref|NP_567740.1| uncharacterized protein [Arabidopsis thaliana] ...   263   4e-68
ref|XP_002283005.1| PREDICTED: uncharacterized protein LOC100262...   261   1e-67
emb|CBI27957.3| unnamed protein product [Vitis vinifera]              261   1e-67

>ref|XP_002867574.1| hypothetical protein ARALYDRAFT_913938 [Arabidopsis lyrata subsp.
           lyrata] gi|297313410|gb|EFH43833.1| hypothetical protein
           ARALYDRAFT_913938 [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  264 bits (675), Expect = 2e-68
 Identities = 125/197 (63%), Positives = 152/197 (77%), Gaps = 2/197 (1%)
 Frame = -2

Query: 897 MIKLTRKWKRSRRNEEEDNGLLPTRDDF--RPIDTQEQEEMIRSFEKKHAQQSLLWRSVF 724
           M KL RKW+R+RR+E++D  +LPT DD   RPIDTQEQEE +RS E+ HAQQS  WRSVF
Sbjct: 1   MKKLARKWRRTRRDEDDDKFVLPTSDDVDSRPIDTQEQEEHVRSLEEAHAQQSRQWRSVF 60

Query: 723 VSLLFSYMAFQIFSIYNQALSPWELRYHAYFMYEVDSWVVISADLLAVMACLMAIKGLLD 544
           V LL  Y AF  +SI  Q +SPWELRYHAYFM ++ SW+VISA+ +A+MAC ++I GL D
Sbjct: 61  VVLLICYGAFLFYSILQQFVSPWELRYHAYFMEDLKSWMVISAEWIAIMACCLSIVGLRD 120

Query: 543 NSKYHRQWILGSCCPGLLLMIFWLYHMLRLPKFRWEIIWLPFGSLCGSGMSMYVDHLLGE 364
               HR+W   SC  G  L IFWLY++LRLPKFRW+ IWLPFG LCG+G+ +YVDHLL E
Sbjct: 121 KKNDHRRWFWYSCVVGSALTIFWLYYLLRLPKFRWDAIWLPFGPLCGAGICLYVDHLLEE 180

Query: 363 SSEEIRKLRGYMYAYKA 313
           SSEE++KLR YMYAYKA
Sbjct: 181 SSEEVKKLRNYMYAYKA 197


>ref|XP_002514174.1| conserved hypothetical protein [Ricinus communis]
           gi|223546630|gb|EEF48128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 197

 Score =  264 bits (675), Expect = 2e-68
 Identities = 128/201 (63%), Positives = 156/201 (77%), Gaps = 5/201 (2%)
 Frame = -2

Query: 897 MIKLTRKWKRSRRNEEEDNGLLPT-----RDDFRPIDTQEQEEMIRSFEKKHAQQSLLWR 733
           M KL R W++SR    ++N  LPT      DD RP+DTQEQEE++RS E+  AQQSLLWR
Sbjct: 1   MKKLARNWRKSR----DENSSLPTWEDPSLDDSRPMDTQEQEELVRSLERTQAQQSLLWR 56

Query: 732 SVFVSLLFSYMAFQIFSIYNQALSPWELRYHAYFMYEVDSWVVISADLLAVMACLMAIKG 553
            VF  LLF Y AFQ++SIY QA SPWELRYHAYFM ++ SW+VISAD +AV+AC MAI G
Sbjct: 57  RVFAGLLFCYAAFQVYSIYQQATSPWELRYHAYFMEDMSSWMVISADWVAVLACSMAIMG 116

Query: 552 LLDNSKYHRQWILGSCCPGLLLMIFWLYHMLRLPKFRWEIIWLPFGSLCGSGMSMYVDHL 373
           LL NSK +R  I  SC  GL L +FWLY+MLR+ +FRW+++WLPFG L G+G+S+YVDHL
Sbjct: 117 LLHNSKQYRPLIWYSCFAGLALAVFWLYYMLRMSRFRWDVLWLPFGPLSGAGLSLYVDHL 176

Query: 372 LGESSEEIRKLRGYMYAYKAS 310
           L ESSEE+RKLRGYMYA+KAS
Sbjct: 177 LIESSEEVRKLRGYMYAFKAS 197


>ref|NP_567740.1| uncharacterized protein [Arabidopsis thaliana]
           gi|19699021|gb|AAL91246.1| unknown protein [Arabidopsis
           thaliana] gi|21553430|gb|AAM62523.1| unknown
           [Arabidopsis thaliana] gi|22136340|gb|AAM91248.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659774|gb|AEE85174.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 198

 Score =  263 bits (672), Expect = 4e-68
 Identities = 123/197 (62%), Positives = 153/197 (77%), Gaps = 2/197 (1%)
 Frame = -2

Query: 897 MIKLTRKWKRSRRNEEEDNGLLPTRDDF--RPIDTQEQEEMIRSFEKKHAQQSLLWRSVF 724
           M KL RKW+R+RR+E++D  +LPT +D   RPIDTQEQEE +R  E+ HAQQSL WRSVF
Sbjct: 1   MKKLARKWRRTRRDEDDDKFVLPTSEDVDSRPIDTQEQEEYVRYLEEAHAQQSLQWRSVF 60

Query: 723 VSLLFSYMAFQIFSIYNQALSPWELRYHAYFMYEVDSWVVISADLLAVMACLMAIKGLLD 544
           V LL  + AF  +SI+ Q +SPWELRYHAYFM ++ SW+VISA+ +A+MAC ++I GL D
Sbjct: 61  VVLLICFGAFLFYSIFQQFMSPWELRYHAYFMEDLKSWMVISAEWIAIMACSLSIVGLRD 120

Query: 543 NSKYHRQWILGSCCPGLLLMIFWLYHMLRLPKFRWEIIWLPFGSLCGSGMSMYVDHLLGE 364
               HR+W   SC  G  L IFWLY++LRLPKFRW+ IWLPFG LCG+G+ +YVDHLL E
Sbjct: 121 KKNDHRRWFWYSCVVGSALTIFWLYYLLRLPKFRWDAIWLPFGPLCGAGICLYVDHLLEE 180

Query: 363 SSEEIRKLRGYMYAYKA 313
           SSEE++KLR YMYAYKA
Sbjct: 181 SSEEVKKLRNYMYAYKA 197


>ref|XP_002283005.1| PREDICTED: uncharacterized protein LOC100262721 [Vitis vinifera]
          Length = 198

 Score =  261 bits (668), Expect = 1e-67
 Identities = 126/196 (64%), Positives = 153/196 (78%)
 Frame = -2

Query: 897 MIKLTRKWKRSRRNEEEDNGLLPTRDDFRPIDTQEQEEMIRSFEKKHAQQSLLWRSVFVS 718
           M KL RK +R+ R  +++N  LPT DD RPID+QEQEE++RS E+  AQQSLLWRSVF  
Sbjct: 3   MKKLARKLRRNSREFDDENFSLPTLDDSRPIDSQEQEELVRSLERSQAQQSLLWRSVFSV 62

Query: 717 LLFSYMAFQIFSIYNQALSPWELRYHAYFMYEVDSWVVISADLLAVMACLMAIKGLLDNS 538
            LF + AF ++SI+ Q  SPWELRYHAYFM E+DS ++I AD +AV+AC MAI GLL  S
Sbjct: 63  FLFCFAAFLVYSIFQQVSSPWELRYHAYFMEEIDSSMIIFADWVAVLACSMAIIGLLHKS 122

Query: 537 KYHRQWILGSCCPGLLLMIFWLYHMLRLPKFRWEIIWLPFGSLCGSGMSMYVDHLLGESS 358
           K HR  I  SC  G++L IFWLY+MLRLPKFRW++IWLPFG L G+ +S+YVDHLL ESS
Sbjct: 123 KSHRWLIWYSCSAGIILAIFWLYYMLRLPKFRWDVIWLPFGPLGGAALSLYVDHLLNESS 182

Query: 357 EEIRKLRGYMYAYKAS 310
           EE+RKLR YMYAYKAS
Sbjct: 183 EEVRKLRSYMYAYKAS 198


>emb|CBI27957.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  261 bits (668), Expect = 1e-67
 Identities = 126/196 (64%), Positives = 153/196 (78%)
 Frame = -2

Query: 897 MIKLTRKWKRSRRNEEEDNGLLPTRDDFRPIDTQEQEEMIRSFEKKHAQQSLLWRSVFVS 718
           M KL RK +R+ R  +++N  LPT DD RPID+QEQEE++RS E+  AQQSLLWRSVF  
Sbjct: 1   MKKLARKLRRNSREFDDENFSLPTLDDSRPIDSQEQEELVRSLERSQAQQSLLWRSVFSV 60

Query: 717 LLFSYMAFQIFSIYNQALSPWELRYHAYFMYEVDSWVVISADLLAVMACLMAIKGLLDNS 538
            LF + AF ++SI+ Q  SPWELRYHAYFM E+DS ++I AD +AV+AC MAI GLL  S
Sbjct: 61  FLFCFAAFLVYSIFQQVSSPWELRYHAYFMEEIDSSMIIFADWVAVLACSMAIIGLLHKS 120

Query: 537 KYHRQWILGSCCPGLLLMIFWLYHMLRLPKFRWEIIWLPFGSLCGSGMSMYVDHLLGESS 358
           K HR  I  SC  G++L IFWLY+MLRLPKFRW++IWLPFG L G+ +S+YVDHLL ESS
Sbjct: 121 KSHRWLIWYSCSAGIILAIFWLYYMLRLPKFRWDVIWLPFGPLGGAALSLYVDHLLNESS 180

Query: 357 EEIRKLRGYMYAYKAS 310
           EE+RKLR YMYAYKAS
Sbjct: 181 EEVRKLRSYMYAYKAS 196


Top