BLASTX nr result

ID: Coptis23_contig00008977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008977
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21211.3| unnamed protein product [Vitis vinifera]              142   2e-31
ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [V...   142   2e-31
emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]   142   2e-31
ref|XP_002527618.1| hypothetical protein RCOM_1025320 [Ricinus c...   125   2e-26
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              124   4e-26

>emb|CBI21211.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  142 bits (357), Expect = 2e-31
 Identities = 68/120 (56%), Positives = 85/120 (70%)
 Frame = +2

Query: 323 SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPLDKHKVMNSCRMESEMKVMQEM 502
           SPAS+ SLP QSE KP + P   P +     GV A+    K  + +    E   KVM++M
Sbjct: 571 SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 629

Query: 503 PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 682
           PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 630 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 689


>ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [Vitis vinifera]
          Length = 367

 Score =  142 bits (357), Expect = 2e-31
 Identities = 68/120 (56%), Positives = 85/120 (70%)
 Frame = +2

Query: 323 SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPLDKHKVMNSCRMESEMKVMQEM 502
           SPAS+ SLP QSE KP + P   P +     GV A+    K  + +    E   KVM++M
Sbjct: 241 SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 299

Query: 503 PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 682
           PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 300 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 359


>emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]
          Length = 1100

 Score =  142 bits (357), Expect = 2e-31
 Identities = 68/120 (56%), Positives = 85/120 (70%)
 Frame = +2

Query: 323  SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPLDKHKVMNSCRMESEMKVMQEM 502
            SPAS+ SLP QSE KP + P   P +     GV A+    K  + +    E   KVM++M
Sbjct: 974  SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 1032

Query: 503  PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 682
            PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 1033 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 1092


>ref|XP_002527618.1| hypothetical protein RCOM_1025320 [Ricinus communis]
           gi|223532992|gb|EEF34757.1| hypothetical protein
           RCOM_1025320 [Ricinus communis]
          Length = 133

 Score =  125 bits (313), Expect = 2e-26
 Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 8/128 (6%)
 Frame = +2

Query: 323 SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAKTPL--------DKHKVMNSCRMES 478
           SP SV SL E          C + ++ +  S +  K+ +        D+ +V N    E 
Sbjct: 9   SPVSVQSLSE----------CEQKLRVTSKSTINGKSGVAMEDSSRCDEARVRNGAE-EM 57

Query: 479 EMKVMQEMPCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGND 658
              V+++MPCV TKGDGPNGKRIEG LY+YR G+EVRIVCVCHGS L+PAEFVKHAGG D
Sbjct: 58  GRNVLEDMPCVSTKGDGPNGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGD 117

Query: 659 VTHPLRHI 682
           V HPL+HI
Sbjct: 118 VAHPLKHI 125


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  124 bits (311), Expect = 4e-26
 Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
 Frame = +2

Query: 341 SLPEQSEHKPTLVPCSKPIQKSD-TSGVTAKTPLDKHKVMNSCRMESEMKVMQEMPCVFT 517
           SL EQS  + +    +KP + +  TSG   + P     +  +    S M  M +MPCVFT
Sbjct: 229 SLQEQSIQEASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGSGMNFMGDMPCVFT 288

Query: 518 KGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 682
           +GDGPNG+RIEG+LY+Y  G+EVRI+CVCHGS L+PAEFVKHAGG DV HPLRHI
Sbjct: 289 RGDGPNGRRIEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGDVAHPLRHI 343


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