BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008968
         (1855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   211   7e-52
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   211   7e-52
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   192   2e-46
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-45
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   187   6e-45

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  211 bits (536), Expect = 7e-52
 Identities = 144/401 (35%), Positives = 207/401 (51%), Gaps = 32/401 (7%)
 Frame = +1

Query: 445  VVDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 624
            + D  +L   LL  IA+K     DYVRF AVC +WR++ +   P  LP QLP LMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQ 59

Query: 625  THDNQTRSLFDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENE 801
             H    R  F LS  +    Q+P   H R  RG S GWL+ + E  E+ LLNP     ++
Sbjct: 60   PHHTH-RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT--RSK 116

Query: 802  IHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPTSNPN 915
            +HLPPL+ F      N    G EY                     ++K ++S++P +  +
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD 176

Query: 916  YAIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQP 1095
            +  + I      +A  +  D  WT L+   +   DVI++   FY V+ YG++  CD++  
Sbjct: 177  FIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGS 236

Query: 1096 HHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYYENTY------SSITYSSIGFV 1257
              P+VS +  P    G + +YLVESG +LLLV R   Y + TY      +S+ Y +  F 
Sbjct: 237  S-PRVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEPDQTSLIYRTTRFQ 291

Query: 1258 VCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1437
            VC+L+    +W  V SL   ++F+G+N S SL + DFPGCK NCIY+TDD+ E  Y+   
Sbjct: 292  VCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1438 RGVGPHDIGVFNLEDCSFEAHYPLECA---MIIPAPIWIEP 1551
               G  D+G+FNLED S E   PL C+   +  P P+W+ P
Sbjct: 352  ---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  211 bits (536), Expect = 7e-52
 Identities = 144/401 (35%), Positives = 208/401 (51%), Gaps = 32/401 (7%)
 Frame = +1

Query: 445  VVDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 624
            + D  +L   LL  IA+K     DYVRF AVC +WR++ +   P  LP QLP LMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQ 59

Query: 625  THDNQTRSLFDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENE 801
             H    R  F LS  +    Q+P   H R  RG S GWL+ + E  E+ LLNP     ++
Sbjct: 60   PHHTH-RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT--RSK 116

Query: 802  IHLPPLTAF-EFHDENHGIWGCEY---------------------LRKAVVSANPTSNPN 915
            +HLPPL+ F      N    G EY                     ++K ++S++P +  +
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSD 176

Query: 916  YAIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQP 1095
            +  + I      +A  +  D  WT L+   +   DVI++   FY V+ YG++  CD++  
Sbjct: 177  FIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGS 236

Query: 1096 HHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYYENTY------SSITYSSIGFV 1257
              P+VS +  P    G + +YLVESG +LLLV R   Y + TY      +S+ Y +  F 
Sbjct: 237  S-PRVSIIEMP-QQFGGDLQYLVESGEELLLVTR---YLDLTYDVEXDQTSLIYRTTRFQ 291

Query: 1258 VCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1437
            VC+L++   +W  V SL   ++F+G+N S SL + DFPGCK NCIY+TDD+ E  Y+   
Sbjct: 292  VCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351

Query: 1438 RGVGPHDIGVFNLEDCSFEAHYPLECA---MIIPAPIWIEP 1551
               G  D+G+FNLED S E   PL C+   +  P P+W+ P
Sbjct: 352  ---GEQDLGIFNLEDGSIE---PLPCSHFRIRWPPPLWVTP 386


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  192 bits (489), Expect = 2e-46
 Identities = 130/383 (33%), Positives = 201/383 (52%), Gaps = 13/383 (3%)
 Frame = +1

Query: 445  VVDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPI 624
            + D  ++P   L  IAEKL  V+DYVRFG VCKSW S + + +  C   + P LML    
Sbjct: 919  MADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEK- 977

Query: 625  THDNQTRSLFDLSRKRVLDFQVPVPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENEI 804
              +++ R  +     +V + ++P    + C G  +GWLVT+  + ++ LLNP   ++  I
Sbjct: 978  -ENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQ--I 1034

Query: 805  HLPPLTAFE-----FHDENHGIWGCE-YLRKAVVSANPTSNPNYAIMAIHGGFNRIAFFK 966
             LP L A             G    + ++ KAV+S+ P+S P+ A+M I+  + R+AF K
Sbjct: 1035 LLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS-PDCAVMIIYSDYGRLAFTK 1093

Query: 967  PGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQPHHPKVSRVAPP----IG 1134
            PG + WT L+S    V+D+IY+   F  V+    ++ CD++      +   A P    + 
Sbjct: 1094 PGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVD 1153

Query: 1135 VHGEETKYLVESGGDLLLVIRTRRYYENTYSSITYSSIG-FVVCKLNTNEHKWTEVKSLL 1311
                E KYLVESGG++ +V  TR  Y+     I Y     F V KL+    +W EV++L 
Sbjct: 1154 EIEYEAKYLVESGGEIYMV--TRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLD 1211

Query: 1312 GHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRGVGPHDIGVFNLEDCSF 1491
              S F+G+N SFS  ASD+P  + N IYFTDD+  G+           D+G++N ++   
Sbjct: 1212 HCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYC-GFLNIPRN----FDMGIYNFQNTQI 1266

Query: 1492 EAHYPL--ECAMIIPAPIWIEPT 1554
            E HYP+  +   +  AP+WI P+
Sbjct: 1267 E-HYPVGHDALSMFSAPLWIRPS 1288


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  190 bits (483), Expect = 1e-45
 Identities = 131/400 (32%), Positives = 202/400 (50%), Gaps = 32/400 (8%)
 Frame = +1

Query: 448  VDRLELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPIT 627
            VD  +LP  L+  I++K++   DY+ F AVC +W+S+ +   P  LP QLP L+LP   +
Sbjct: 3    VDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSS-IPKTPNHLPPQLPWLLLPQSQS 61

Query: 628  HDNQTRSLFDLSRKRVLDFQVP-VPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENEI 804
            + +  R+ F+LS  +     +P   H +   G S GWL+ + ++  + ++NP      +I
Sbjct: 62   NQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLT--RRKI 119

Query: 805  HLPPLTAF-EFHDENHGIWGCEYL---------------------RKAVVSANPTSNPN- 915
            HLP +++F      ++   G EYL                     +K V+S++P      
Sbjct: 120  HLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGD 179

Query: 916  -YAIMAIHGGFNRIAFFKPGDKVWTNLDSTYTLVNDVIYYGYQFYFVDDYGALFGCDLNQ 1092
             +  MAI      +A+ K GD+ W  ++++ +   DVIY+   FY V+  G +  CD+N 
Sbjct: 180  FFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG 239

Query: 1093 PHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRYYENTYSSITYSSIGFVVCKLN 1272
             + PKVS +  P  + G+  +YLV SG  LLLV R     +  +    Y +  F V KL+
Sbjct: 240  -NSPKVSFIETPRQIGGD-MQYLVSSGDGLLLVTRYLDL-DVEFDIFIYKTARFEVFKLD 296

Query: 1273 TNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASDRGVGP 1452
             N  +W  V SL    +FIG+NSS +L AS   GC  +CIY+TDD+    Y   D  +G 
Sbjct: 297  LNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNY---DGHIGE 353

Query: 1453 HDIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 1551
            HD+G+F L D S E   PL C        +  P P+WI P
Sbjct: 354  HDLGIFKLSDGSIE---PLPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  187 bits (476), Expect = 6e-45
 Identities = 147/405 (36%), Positives = 197/405 (48%), Gaps = 41/405 (10%)
 Frame = +1

Query: 460  ELPGHLLSTIAEKLSGVDDYVRFGAVCKSWRSAYLESQPRCLPHQLPLLMLPTPITHDNQ 639
            ELP  LL +I++ L+   DY+RF +VC+SWRS+ +   P  LP QLP LML         
Sbjct: 7    ELPPELLESISKTLTIYVDYLRFRSVCRSWRSS-VPKIPLHLPPQLPWLML--------S 57

Query: 640  TRSLFDLS--RKRVLDFQVPVPHNRLCRGCSFGWLVTVLENYEVRLLNPFVSIENEIHLP 813
             R+ FDLS  +  +L+ Q P    R+C G S GWLV + E  ++RLLNP         LP
Sbjct: 58   RRAFFDLSLNKTHLLNPQ-PSHRTRIC-GSSHGWLVMLDETPQIRLLNPLTRATRP--LP 113

Query: 814  PLTAF-EFHDENHGIWGCEYL---------------------RKAVVSANPTSNPNYAIM 927
            PL AF      +H   G EYL                      K V+SA+PT N ++A +
Sbjct: 114  PLHAFPNVVAFDHANVGREYLIQNPYGGLYAFNLRQMCNSFLGKVVLSASPTLNDDFAAL 173

Query: 928  AIHGGFNRIAFFKPGDKVWTNLDSTYTLVN---DVIYYGYQFYFVDDYGALFGCDLNQ-- 1092
            AI G  N +AF + G   W  L+     +N   DV+ Y   F+ V   G +  CD  +  
Sbjct: 174  AIVGQ-NNLAFCRNGYDSWIFLNGEEEEMNCWEDVVNYNGLFFAVSKGGTIAVCDAGEGC 232

Query: 1093 -PHHPKVSRVAPPIGVHGEETKYLVESGGDLLLVIRTRRY----YENTYSSITYSSIGFV 1257
             P    + +   P G  G+   Y V S GD+LL+IR        +    S + Y ++GF 
Sbjct: 233  FPPRVSIIQTTTPFGFAGD-IHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFE 291

Query: 1258 VCKLNTNEHKWTEVKSLLGHSVFIGDNSSFSLLASDFPGCKPNCIYFTDDFLEGYYEASD 1437
            V K+N     W  V++L    +F+G NSS S  ASDF GC  +CIYFTDD+ E      D
Sbjct: 292  VFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE---SNDD 348

Query: 1438 RGVGPHDIGVFNLEDCSFEAHYPLEC-------AMIIPAPIWIEP 1551
               G HD+GVF L D S E   PL C        +  P PIW+ P
Sbjct: 349  DACGKHDLGVFRLRDKSIE---PLPCFNQNSCSRLRWPLPIWVSP 390