BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008959
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517838.1| conserved hypothetical protein [Ricinus comm...    59   1e-06
ref|XP_002277888.1| PREDICTED: uncharacterized protein LOC100262...    55   1e-05

>ref|XP_002517838.1| conserved hypothetical protein [Ricinus communis]
           gi|223542820|gb|EEF44356.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 45/110 (40%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
 Frame = +3

Query: 3   SSSSTTSLRNHDGMLVLTRPSPKPI-----------QPQHPKTQPIE------HKPES-- 125
           SSSS++S R+H  MLVLTRP+PKPI            PQ   TQ  +       +P+S  
Sbjct: 55  SSSSSSSSRSHGRMLVLTRPTPKPISNIATTPPLSPSPQIKSTQSPDIQDQDRSEPDSNL 114

Query: 126 ISLRPLGRXXXXXXXXXXXQEREKEAXXXXXXXXXXXXHLRPGFVGKEEK 275
           ISLRP GR           Q  EKE             HLRPGFVG+EE+
Sbjct: 115 ISLRPSGRTGSSLCVSAQIQIPEKEV----GAGKFVPPHLRPGFVGREER 160


>ref|XP_002277888.1| PREDICTED: uncharacterized protein LOC100262549 [Vitis vinifera]
          Length = 192

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 41/113 (36%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = +3

Query: 9   SSTTSLRNHDGMLVLTRPSPK------PIQPQHPKTQPIEHKPESISLR--PLGRXXXXX 164
           S   + R H GMLVL+RP+PK      P Q Q P   PI+ +PE  SL   PLGR     
Sbjct: 46  SHLAATRTHGGMLVLSRPTPKAQPQLPPPQKQQPPPPPIQARPEQDSLAPLPLGRAQAGS 105

Query: 165 XXXXXXQEREKEAXXXXXXXXXXXXHLRPGFVGKEEK-----LVGQNGQRNIG 308
                  + ++              HLRPGFVG+EEK      +  N Q N G
Sbjct: 106 PSPSSPSKPDR----------FVPPHLRPGFVGREEKPGLEFQIRPNRQGNFG 148