BLASTX nr result

ID: Coptis23_contig00008951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008951
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313934.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
ref|XP_002334377.1| predicted protein [Populus trichocarpa] gi|1...   208   1e-51
gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia...   206   4e-51
ref|XP_002336902.1| predicted protein [Populus trichocarpa] gi|2...   206   6e-51
gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia...   206   7e-51

>ref|XP_002313934.1| predicted protein [Populus trichocarpa] gi|222850342|gb|EEE87889.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  208 bits (530), Expect = 1e-51
 Identities = 97/141 (68%), Positives = 109/141 (77%)
 Frame = -3

Query: 709 SQAQDSPQDYLSVHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCNLVHSGGPYGENL 530
           S+AQD+PQDYL  H AARA VGV P+TWD  V         Q A  CNL+HSGGPYGENL
Sbjct: 22  SRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLIHSGGPYGENL 81

Query: 529 AWGSDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICST 350
           AW S + L+GT AV MWV EK  YDYNSN+C++G  CGHYTQVVWRNS RLGCAKV CST
Sbjct: 82  AWSS-ADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGCAKVKCST 140

Query: 349 GGTFIICSYDPPGNFVGEKPY 287
           GGTFI C+YDPPGN+VG+KPY
Sbjct: 141 GGTFIGCNYDPPGNYVGQKPY 161


>ref|XP_002334377.1| predicted protein [Populus trichocarpa] gi|118485875|gb|ABK94784.1|
           unknown [Populus trichocarpa]
           gi|118488561|gb|ABK96093.1| unknown [Populus
           trichocarpa] gi|222871723|gb|EEF08854.1| predicted
           protein [Populus trichocarpa]
          Length = 161

 Score =  208 bits (529), Expect = 1e-51
 Identities = 97/141 (68%), Positives = 109/141 (77%)
 Frame = -3

Query: 709 SQAQDSPQDYLSVHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCNLVHSGGPYGENL 530
           S+AQD+PQDYL  H AARA VGV P+TWD  V         Q A  CNLVHSGGPYGEN+
Sbjct: 22  SRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLVHSGGPYGENI 81

Query: 529 AWGSDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICST 350
           AW S + L+GT AV MWV EK  YDYNSN+C++G  CGHYTQVVWRNS RLGCAKV CST
Sbjct: 82  AWSS-ADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGCAKVKCST 140

Query: 349 GGTFIICSYDPPGNFVGEKPY 287
           GGTFI C+YDPPGN+VG+KPY
Sbjct: 141 GGTFIGCNYDPPGNYVGQKPY 161


>gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia oblonga]
          Length = 153

 Score =  206 bits (525), Expect = 4e-51
 Identities = 96/141 (68%), Positives = 110/141 (78%)
 Frame = -3

Query: 709 SQAQDSPQDYLSVHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCNLVHSGGPYGENL 530
           S AQD+PQDYL+ H AARA VGV P+TWDD V         Q    CNLVHSGGPYGENL
Sbjct: 14  SHAQDAPQDYLNSHNAARAAVGVGPLTWDDNVAGYAQNYANQHVGDCNLVHSGGPYGENL 73

Query: 529 AWGSDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICST 350
           A  S   ++GTAAV+MWVAEK +YDY SN+C+ G VCGHYTQVVWRNS R+GCAKV CS+
Sbjct: 74  AM-STGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSARVGCAKVRCSS 132

Query: 349 GGTFIICSYDPPGNFVGEKPY 287
           GGTFI C+YDPPGN+VG+KPY
Sbjct: 133 GGTFIGCNYDPPGNYVGQKPY 153


>ref|XP_002336902.1| predicted protein [Populus trichocarpa] gi|222837091|gb|EEE75470.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  206 bits (524), Expect = 6e-51
 Identities = 96/141 (68%), Positives = 108/141 (76%)
 Frame = -3

Query: 709 SQAQDSPQDYLSVHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCNLVHSGGPYGENL 530
           S+AQD+PQDYL  H AARA VGV P+TWD  V         Q A  CNLVHSGGPYGEN+
Sbjct: 22  SRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLVHSGGPYGENI 81

Query: 529 AWGSDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICST 350
           AW S + L+G  AV MWV EK  YDYNSN+C++G  CGHYTQVVWRNS RLGCAKV CST
Sbjct: 82  AWSS-ADLSGADAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGCAKVKCST 140

Query: 349 GGTFIICSYDPPGNFVGEKPY 287
           GGTFI C+YDPPGN+VG+KPY
Sbjct: 141 GGTFIGCNYDPPGNYVGQKPY 161


>gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia oblonga]
          Length = 154

 Score =  206 bits (523), Expect = 7e-51
 Identities = 96/141 (68%), Positives = 110/141 (78%)
 Frame = -3

Query: 709 SQAQDSPQDYLSVHTAARAEVGVEPMTWDDGVXXXXXXXXXQMASSCNLVHSGGPYGENL 530
           S AQD+PQDYL+ H AARA VGV P+TWDD V         Q    CNLVHSGGPYGENL
Sbjct: 15  SHAQDTPQDYLNSHNAARAAVGVGPLTWDDKVAGYAQNYANQHVGDCNLVHSGGPYGENL 74

Query: 529 AWGSDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICST 350
           A  S   ++GTAAV+MWVAEK +YDY SN+C+ G VCGHYTQVVWRNS R+GCAKV CS+
Sbjct: 75  AM-STGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSARVGCAKVRCSS 133

Query: 349 GGTFIICSYDPPGNFVGEKPY 287
           GGTFI C+YDPPGN+VG+KPY
Sbjct: 134 GGTFIGCNYDPPGNYVGQKPY 154


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