BLASTX nr result

ID: Coptis23_contig00008946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008946
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534208.1| conserved hypothetical protein [Ricinus comm...   108   7e-22
ref|XP_002313526.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_002328162.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_003638077.1| 2-phosphoglycerate kinase [Medicago truncatu...    98   1e-18
ref|XP_003539779.1| PREDICTED: uncharacterized protein DDB_G0273...    86   6e-15

>ref|XP_002534208.1| conserved hypothetical protein [Ricinus communis]
           gi|223525703|gb|EEF28172.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 716

 Score =  108 bits (270), Expect = 7e-22
 Identities = 59/109 (54%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
 Frame = +1

Query: 1   AMRDGQETGYWSDNEDEYNNLATVREYAAGDSSENVSADKYVENLNLFLKTSREPLF--- 171
           AM+D QE GYWSD++DE  +        +G  S  +  DKY++NL+ FL+T  EPL    
Sbjct: 609 AMQDVQENGYWSDDDDESKDKVAP---ISGGRSSPLKGDKYMQNLDRFLRTRSEPLAEPL 665

Query: 172 -SYSSMLSEKNHRRMPVSGNVRMRKRSLSIPAMGKHGSLVNGPILSGAP 315
            +YSS+L+EK  RRM  SG+ +MR+RSLSIPA+GKHGS V GPILSGAP
Sbjct: 666 CAYSSLLAEKGGRRMSNSGSGKMRRRSLSIPAIGKHGSEVAGPILSGAP 714


>ref|XP_002313526.1| predicted protein [Populus trichocarpa] gi|222849934|gb|EEE87481.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score =  100 bits (248), Expect = 3e-19
 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   AMRDGQETGYWSDNEDEYNNLATVREYAAGDSSENVSADKYVENLNLFLKTSRE----PL 168
           AM+D QE GYWSD+++E  +   +   + G SS     DKY +NL  FL T  E    PL
Sbjct: 622 AMQDVQENGYWSDDDEESKD--RLPPISWGHSSPK-RGDKYRQNLERFLSTRSEQVAEPL 678

Query: 169 FSYSSMLSEKNHRRMPVSGNVRMRKRSLSIPAMGKHGSLVNGPILSGAPQ 318
            SYSS+L EK+ RRM  SG++++RKRSLSIPA+GKH S+V  PILSGAP+
Sbjct: 679 RSYSSLLREKSERRMLSSGSLKIRKRSLSIPAIGKHESMVGDPILSGAPR 728


>ref|XP_002328162.1| predicted protein [Populus trichocarpa] gi|222837677|gb|EEE76042.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  100 bits (248), Expect = 3e-19
 Identities = 57/110 (51%), Positives = 76/110 (69%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   AMRDGQETGYWSDNEDEYNNLATVREYAAGDSSENVSADKYVENLNLFLKTSRE----PL 168
           AM+D QE GYWSD+++E  +   +   + G+ S N   DKY +NL  FL T  E    PL
Sbjct: 631 AMQDVQENGYWSDDDEEPKD--RLPPISGGNVSPN-KIDKYRQNLERFLGTRSEQLAEPL 687

Query: 169 FSYSSMLSEKNHRRMPVSGNVRMRKRSLSIPAMGKHGSLVNGPILSGAPQ 318
            SYSS+L E+  RRM  SG++++RKRSLSIPA+ KHGS+++ PILSGAPQ
Sbjct: 688 CSYSSLLVEQGERRMLSSGSLKIRKRSLSIPAIRKHGSVISDPILSGAPQ 737


>ref|XP_003638077.1| 2-phosphoglycerate kinase [Medicago truncatula]
           gi|355504012|gb|AES85215.1| 2-phosphoglycerate kinase
           [Medicago truncatula]
          Length = 601

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
 Frame = +1

Query: 1   AMRDGQETGYWSDNEDEYNNLATVREYAAGDSSENVSADKYVENLNLFLKTSREP----L 168
           AM+D  E+GYWSD+++E+ +   + +   G     +   KY +NL+LFL+T  EP    L
Sbjct: 496 AMQDVPESGYWSDDDEEFRSKVAIGQEDLGAKMHGI---KYRQNLDLFLRTRSEPVPESL 552

Query: 169 FSYSSMLSEKNHRRMPVSGNVRMRKRSLSIPAMGKHGSLVNGPILSGAP 315
            SYSS+L EK  RR+P SG  ++RKRSLSI A+GK  S V  PI+SGAP
Sbjct: 553 CSYSSLLMEKAERRLPPSGKAKLRKRSLSISALGKGSSTVQDPIISGAP 601


>ref|XP_003539779.1| PREDICTED: uncharacterized protein DDB_G0273453/DDB_G0273565-like
           [Glycine max]
          Length = 704

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 55/108 (50%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   AMRDGQETGYWSDNEDEYNNLATVREYAAGDSSENVSADKYVENLNLFLKTSRE---PLF 171
           AM+D  E GYWSD+E EY     V        S+     KY  NL+LFL++  E   PLF
Sbjct: 604 AMQDVLENGYWSDDE-EYR--IRVDGVTGELGSKMHGGYKYRRNLDLFLRSRSELAEPLF 660

Query: 172 SYSSMLSEKNHRRMPVSGNVRMRKRSLSIPAMGKHGSLVNGPILSGAP 315
           SYSS+L EKN R+       ++R RSLSIPA+GKH S VN PILSGAP
Sbjct: 661 SYSSLLVEKNERK------AKLRTRSLSIPALGKHRSAVNDPILSGAP 702


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