BLASTX nr result
ID: Coptis23_contig00008932
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008932
(1995 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533181.1| protein translocase secy subunit, putative [... 712 0.0
ref|XP_002262945.2| PREDICTED: preprotein translocase subunit se... 706 0.0
ref|XP_003527188.1| PREDICTED: preprotein translocase subunit se... 703 0.0
ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arab... 699 0.0
emb|CBI24093.3| unnamed protein product [Vitis vinifera] 697 0.0
>ref|XP_002533181.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223527015|gb|EEF29204.1| protein translocase secy
subunit, putative [Ricinus communis]
Length = 557
Score = 712 bits (1838), Expect = 0.0
Identities = 382/509 (75%), Positives = 408/509 (80%), Gaps = 4/509 (0%)
Frame = -1
Query: 1833 TSVCRASFTVDRKPHS---TWKVDIPLNKRY-DGAGFDPLGINSDASFGLNAAWENVLXX 1666
T CRASF++ +P S T P N +G+ FDPLGIN+D G+NAAWE++L
Sbjct: 44 TCACRASFSLQNRPTSSTTTTTTTKPWNTNSCEGSVFDPLGINTDEYSGVNAAWESILAL 103
Query: 1665 XXXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYV 1486
RGVAA+IEDSSIDFGD LALSRLGIY+
Sbjct: 104 LSPIFESASSTKRDKPSARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYI 163
Query: 1485 PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPK 1306
PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA IVFQLL QVYPK
Sbjct: 164 PLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPK 223
Query: 1305 LQELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFXXXXXXXXXXXXXX 1126
LQ+LQK+EGEAGRKKILQYTRYASVGFA+VQAIGQVLYLRPYVNDF
Sbjct: 224 LQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTQWVLSSVTLLTL 283
Query: 1125 XXXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXXXXXXX 946
TY+GER +DLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNY+G
Sbjct: 284 GSVFTTYLGERTSDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLATIIISF 343
Query: 945 XXXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALP 766
VYVQEAERKIPLNYASRY+S++GGLQKSAYLPFKVNSSGVMPIIFSTSSLALP
Sbjct: 344 FLLVLGIVYVQEAERKIPLNYASRYTSRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALP 403
Query: 765 GTLARFTGIAALKNAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 586
GTLARFTGI+ALK AAV+LNPGGA YLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA
Sbjct: 404 GTLARFTGISALKKAAVALNPGGAFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 463
Query: 585 SIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLIL 406
SIP VRPGKSTAAF+KTVLSRISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTSVLIL
Sbjct: 464 SIPQVRPGKSTAAFLKTVLSRISVLGSGFLAILAAGPAVVEQITHLTAFRGFAGTSVLIL 523
Query: 405 VGCATDTARKVQAEIISQKYKNIEFYDID 319
VGCATDTARKVQAEIISQKYKNIEFYDID
Sbjct: 524 VGCATDTARKVQAEIISQKYKNIEFYDID 552
>ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Vitis vinifera]
Length = 546
Score = 706 bits (1821), Expect = 0.0
Identities = 378/509 (74%), Positives = 410/509 (80%), Gaps = 4/509 (0%)
Frame = -1
Query: 1830 SVCRASFTVDRKPHST---WKVDIPLNKRYDGAGFDPLGINSDASFGLNAAWENVLXXXX 1660
SV RASF V KP+ST W + + N G FDPLGI+SD S GLNA WE+ L
Sbjct: 36 SVSRASFAVHTKPNSTPNSWNLALFCNS-CKGPVFDPLGIDSDKSLGLNATWESALGLLS 94
Query: 1659 XXXXXXXXXXXXXXXXR-GVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYVP 1483
GVAA+IEDSSIDFGD LALSRLG+YVP
Sbjct: 95 QTFGSTSSTKKDKSASGQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVP 154
Query: 1482 LGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPKL 1303
LGGVNR+AFVGNLDQNSLL+TLDSFSGGGIGRLGICSLGIVPFINA IVFQLLTQ+YPKL
Sbjct: 155 LGGVNREAFVGNLDQNSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKL 214
Query: 1302 QELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFXXXXXXXXXXXXXXX 1123
Q+LQK+EGE GRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDF
Sbjct: 215 QDLQKREGETGRKKVLQYTRYASVGFALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLG 274
Query: 1122 XXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXXXXXXXX 943
TYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNYIG
Sbjct: 275 SVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYIGLVIIIISFF 334
Query: 942 XXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG 763
VYVQEAERKIPLNYASRY++++GGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG
Sbjct: 335 LLVLGIVYVQEAERKIPLNYASRYTNRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG 394
Query: 762 TLARFTGIAALKNAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 583
T++RFTG+AALK AA++LNPGG+LYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS
Sbjct: 395 TVSRFTGLAALKKAALALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 454
Query: 582 IPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILV 403
IPLVRPGKSTAAFIK VLSRISVLGS FLA+LAAGP+++EQTTHLTAFRGFAGTSVLILV
Sbjct: 455 IPLVRPGKSTAAFIKMVLSRISVLGSGFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILV 514
Query: 402 GCATDTARKVQAEIISQKYKNIEFYDIDK 316
GCATDTARKVQAEIISQKYKNIEFYDID+
Sbjct: 515 GCATDTARKVQAEIISQKYKNIEFYDIDR 543
>ref|XP_003527188.1| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Glycine max]
Length = 540
Score = 703 bits (1814), Expect = 0.0
Identities = 371/509 (72%), Positives = 406/509 (79%), Gaps = 1/509 (0%)
Frame = -1
Query: 1839 RTTSVCRASFTVDRKPHSTWKVDIPLNKRYDGAGFDPLGINSDASFGLNAAWEN-VLXXX 1663
+TTS+C+ASF+V R+P +W L+ + A FDPLGINSD S GLN+ W+N V
Sbjct: 32 KTTSICQASFSVQRRPTHSWNTR-HLSTSSELANFDPLGINSDLSSGLNSTWKNLVCSIT 90
Query: 1662 XXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSRLGIYVP 1483
+GVAA+IEDSSIDFGD LALSRLG+Y+P
Sbjct: 91 QTFESTSSAEKGKPNSSQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIP 150
Query: 1482 LGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQVYPKL 1303
LGGVNR+AFVGNLDQNSLLSTLDSFSGGGIGRLG+CSLGIVPFINA IVFQLL QVYPKL
Sbjct: 151 LGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLLAQVYPKL 210
Query: 1302 QELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFXXXXXXXXXXXXXXX 1123
Q+LQK+EGEAGRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDF
Sbjct: 211 QDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVISSVILLTLG 270
Query: 1122 XXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXXXXXXXX 943
YIGERITDLKLGNGTSLLIFT+IISYLPASFGRT A+AF D NYIG
Sbjct: 271 SVFTMYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFNDANYIGLGTIVLSFF 330
Query: 942 XXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPG 763
VYVQEAERKIPLNYASR++S+S GL+KSAYLPFKVNSSGVMPIIFSTSSLALPG
Sbjct: 331 LLVVGIVYVQEAERKIPLNYASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPG 390
Query: 762 TLARFTGIAALKNAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 583
TLARFTG+ ALK AAV+LNPGG+ YLP NILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS
Sbjct: 391 TLARFTGLTALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 450
Query: 582 IPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGTSVLILV 403
IPLVRPG++TA FIKTVLSRISVLGS FLA+LAAGPAV+EQ THLTAFRGFAGTS+LILV
Sbjct: 451 IPLVRPGRTTATFIKTVLSRISVLGSTFLAILAAGPAVVEQITHLTAFRGFAGTSILILV 510
Query: 402 GCATDTARKVQAEIISQKYKNIEFYDIDK 316
GCATDTARKVQAEIISQKYKNIEFYD DK
Sbjct: 511 GCATDTARKVQAEIISQKYKNIEFYDFDK 539
>ref|XP_002886190.1| hypothetical protein ARALYDRAFT_480774 [Arabidopsis lyrata subsp.
lyrata] gi|297332030|gb|EFH62449.1| hypothetical protein
ARALYDRAFT_480774 [Arabidopsis lyrata subsp. lyrata]
Length = 549
Score = 699 bits (1804), Expect = 0.0
Identities = 379/518 (73%), Positives = 409/518 (78%), Gaps = 7/518 (1%)
Frame = -1
Query: 1839 RTTSVCRASFTVDRKPHST-----WKVDIPLNKRYDGAG-FDPLGINSDASFGLNAAWEN 1678
R++S+ RASF+V K +T W + + +N R A FDPLGIN D + GL++ WE+
Sbjct: 32 RSSSLYRASFSVSTKTRNTCKAKSWNLGLVINSRSSEASVFDPLGINPDETSGLSSIWES 91
Query: 1677 -VLXXXXXXXXXXXXXXXXXXXXRGVAASIEDSSIDFGDXXXXXXXXXXXXXXXXLALSR 1501
V RGVAA+IEDSSIDFGD LALSR
Sbjct: 92 FVSLLSPSYESSSGSKRDKPSSGRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSR 151
Query: 1500 LGIYVPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLT 1321
LGIY+PLGGVNR+AFVGNLDQNS+LSTLD+FSGGGIGRLGICSLGIVPFINA IVFQLL
Sbjct: 152 LGIYIPLGGVNREAFVGNLDQNSILSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLA 211
Query: 1320 QVYPKLQELQKKEGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFXXXXXXXXX 1141
QVYPKLQ+LQKKEGEAGRKKILQYTRYASVGFA+VQAIGQV YLRPYVNDF
Sbjct: 212 QVYPKLQDLQKKEGEAGRKKILQYTRYASVGFAIVQAIGQVFYLRPYVNDFSTEWAISSV 271
Query: 1140 XXXXXXXXXXTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYIGXXX 961
TYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRTAAEA Q+GNY G
Sbjct: 272 TLLSLGSVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTAAEALQEGNYTGLAT 331
Query: 960 XXXXXXXXXXXXVYVQEAERKIPLNYASRYSSKSGGLQKSAYLPFKVNSSGVMPIIFSTS 781
VYVQEAERKIPLNYASRY+SK+GGLQKSAYLPFKVNS+GVMPIIFSTS
Sbjct: 332 IVVSFLLLVLGIVYVQEAERKIPLNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTS 391
Query: 780 SLALPGTLARFTGIAALKNAAVSLNPGGALYLPTNILLIAFFNYYYTFLQLDPDDVSEQL 601
SLALP TLARFTGI+ALKN A +LNPGG+ YLPTNILLIAFFNYYYTFLQLDPDDVSEQL
Sbjct: 392 SLALPATLARFTGISALKNVAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQL 451
Query: 600 KRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPAVIEQTTHLTAFRGFAGT 421
KRQGASIPLVRPGKSTA FIKTVL RISVLGSAFLAVLAAGPAV+EQ THLTAFRGFAGT
Sbjct: 452 KRQGASIPLVRPGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGT 511
Query: 420 SVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK*SP 307
SVLILVGCATDTARKVQAEIISQKYKNIEFY++DK P
Sbjct: 512 SVLILVGCATDTARKVQAEIISQKYKNIEFYELDKYDP 549
>emb|CBI24093.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 697 bits (1798), Expect = 0.0
Identities = 378/539 (70%), Positives = 412/539 (76%), Gaps = 34/539 (6%)
Frame = -1
Query: 1830 SVCRASFTVDRKPHST---WKVDIPLNKRY------------------------------ 1750
SV RASF V KP+ST W + + N+ +
Sbjct: 36 SVSRASFAVHTKPNSTPNSWNLALFCNRTFCGKKILRPTMIIYIPLDVSPNMINMDSSFC 95
Query: 1749 DGAGFDPLGINSDASFGLNAAWENVLXXXXXXXXXXXXXXXXXXXXR-GVAASIEDSSID 1573
G FDPLGI+SD S GLNA WE+ L GVAA+IEDSSID
Sbjct: 96 KGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIEDSSID 155
Query: 1572 FGDXXXXXXXXXXXXXXXXLALSRLGIYVPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGI 1393
FGD LALSRLG+YVPLGGVNR+AFVGNLDQNSLL+TLDSFSGGGI
Sbjct: 156 FGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFSGGGI 215
Query: 1392 GRLGICSLGIVPFINASIVFQLLTQVYPKLQELQKKEGEAGRKKILQYTRYASVGFAVVQ 1213
GRLGICSLGIVPFINA IVFQLLTQ+YPKLQ+LQK+EGE GRKK+LQYTRYASVGFA+VQ
Sbjct: 216 GRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGFALVQ 275
Query: 1212 AIGQVLYLRPYVNDFXXXXXXXXXXXXXXXXXXXTYIGERITDLKLGNGTSLLIFTSIIS 1033
AIGQVL+LRPYVNDF TYIGERI+DLKLGNGTSLLIFTSIIS
Sbjct: 276 AIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIIS 335
Query: 1032 YLPASFGRTAAEAFQDGNYIGXXXXXXXXXXXXXXXVYVQEAERKIPLNYASRYSSKSGG 853
YLPASFGRT A+AFQDGNYIG VYVQEAERKIPLNYASRY++++GG
Sbjct: 336 YLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERKIPLNYASRYTNRTGG 395
Query: 852 LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKNAAVSLNPGGALYLPTNI 673
LQKSAYLPFKVNSSGVMPIIFSTSSLALPGT++RFTG+AALK AA++LNPGG+LYLPTNI
Sbjct: 396 LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAALALNPGGSLYLPTNI 455
Query: 672 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLA 493
LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIK VLSRISVLGS FLA
Sbjct: 456 LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGSGFLA 515
Query: 492 VLAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDK 316
+LAAGP+++EQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID+
Sbjct: 516 ILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDR 574