BLASTX nr result
ID: Coptis23_contig00008931
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008931
(1866 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ... 327 e-147
ref|XP_002524282.1| nucleic acid binding protein, putative [Rici... 327 e-147
ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2... 330 e-146
dbj|BAE71308.1| hypothetical protein [Trifolium pratense] 311 e-140
ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing ... 312 e-140
>ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
vinifera] gi|302143015|emb|CBI20310.3| unnamed protein
product [Vitis vinifera]
Length = 497
Score = 327 bits (839), Expect(2) = e-147
Identities = 175/279 (62%), Positives = 209/279 (74%), Gaps = 2/279 (0%)
Frame = -3
Query: 1153 KAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKGQ 974
KAA +I+DAIS+ P LRPLCLILKVFLQQRELNEVYSGGIGSYALL MLIA LQ
Sbjct: 228 KAAEYIQDAISKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAMLQN----- 282
Query: 973 YYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYLL 794
Q AS E NLG+LLVNFFDFYGRKLN D+GV+C GTFFLK+ KGF+N+ + +L+
Sbjct: 283 -LQEWNASVEHNLGVLLVNFFDFYGRKLNTVDIGVTCNGPGTFFLKSTKGFVNKGQKFLI 341
Query: 793 SIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSLGRSRSILGTIIRPDSILL 614
SIEDPQ P NDIG++SFN+ QIRSAF MAFSTLTN +TIL L +RSILGTIIRPD ILL
Sbjct: 342 SIEDPQLPGNDIGKNSFNYFQIRSAFSMAFSTLTNARTILGLDPNRSILGTIIRPDPILL 401
Query: 613 ERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFD--EEEPLPRQNGNLGEDSLN 440
ERKGG+NG +TFD LLPGAGEP L+ + QE++ NWQ + EEEPLPR N G+ S N
Sbjct: 402 ERKGGSNGTMTFDHLLPGAGEP-LSPQTGGQELLCNWQVEDAEEEPLPRSNPIAGDGSAN 460
Query: 439 SSGKRKKVLREKRISLSNGREVVQRNYHANKLRKRWKSQ 323
SSGK++K +E+ + +E +K ++RWK Q
Sbjct: 461 SSGKKRKASKER--LRNKVKEHADMEKDKSKKKRRWKHQ 497
Score = 223 bits (567), Expect(2) = e-147
Identities = 122/197 (61%), Positives = 141/197 (71%)
Frame = -2
Query: 1862 EPYSVFRNQVXXXXXXXXXXXXXXXXXTDYFSLDVSNDDIDLKVTKQEPPIIPTPIGNRE 1683
+PY V+RNQ+ DYFSLD D V + P TP E
Sbjct: 30 QPYYVYRNQISLSSLSYPSPETAAP---DYFSLDARAD-----VEEPSPARFRTPPPASE 81
Query: 1682 FESNKRVLESGWFSANGKFKSPMLQLHKEILDFCEFLSPTLEEQAARNAAVEGVFGVIKH 1503
E+ +ESGWF N + +SPML+LHKEILDF +FLSPT +EQ+ARNAA+E VF VI++
Sbjct: 82 EEAP--AVESGWFRGNSRLRSPMLKLHKEILDFSDFLSPTPKEQSARNAAIESVFNVIRY 139
Query: 1502 IWPNCNVEVFGSFKTGLYLPTSDIDVVILDSKVKTPQIGLVALSRALTQRGIAKKMQVIA 1323
IWPNC VEVFGSFKTGLYLPTSDIDVVIL S +KTPQIGL ALSRAL+Q+GIAKK+QVIA
Sbjct: 140 IWPNCKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLYALSRALSQKGIAKKIQVIA 199
Query: 1322 KARVPIIKFIEKRSGVA 1272
KARVPIIKFIEKRS VA
Sbjct: 200 KARVPIIKFIEKRSSVA 216
>ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536473|gb|EEF38121.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 526
Score = 327 bits (838), Expect(2) = e-147
Identities = 175/279 (62%), Positives = 209/279 (74%), Gaps = 1/279 (0%)
Frame = -3
Query: 1153 KAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKGQ 974
KAA FIKDA+ + PALRPL LILKVFLQQRELNEVYSGGIGSYALLTML+A L
Sbjct: 248 KAAEFIKDAVRKWPALRPLSLILKVFLQQRELNEVYSGGIGSYALLTMLMAVL------- 300
Query: 973 YYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYLL 794
KAS E NLG+LLV FFDFYGRKLN DVGVSCK AGTFF K +KGF+N+ RP+L+
Sbjct: 301 -----KASSEHNLGVLLVYFFDFYGRKLNTTDVGVSCKGAGTFFSKRKKGFMNKGRPFLI 355
Query: 793 SIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSLGRSRSILGTIIRPDSILL 614
+IEDPQAP+NDIG++SFN+SQIRSAF MAFSTLTN +TILSLG +RSILGTIIRPDSILL
Sbjct: 356 AIEDPQAPDNDIGKNSFNYSQIRSAFSMAFSTLTNPRTILSLGPNRSILGTIIRPDSILL 415
Query: 613 ERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFDEEEPLPRQNGNLGEDS-LNS 437
ERK G NGEVTF SLLPGAGE L+ QE++ NWQ D++E + + G + EDS S
Sbjct: 416 ERKAGCNGEVTFSSLLPGAGE-LIQSHYDHQEILGNWQLDDDEEVLPRGGGIAEDSGAQS 474
Query: 436 SGKRKKVLREKRISLSNGREVVQRNYHANKLRKRWKSQK 320
SGK++K ++K + + ++ + RK K Q+
Sbjct: 475 SGKKRKSSKDKSTKREENGSIGKVSHEESGSRKDRKKQR 513
Score = 223 bits (567), Expect(2) = e-147
Identities = 116/199 (58%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
Frame = -2
Query: 1865 PEPYSVFRNQVXXXXXXXXXXXXXXXXXTDYFSLDVSNDDIDLKVTKQEPPIIPTPIGNR 1686
P P+SVFRN++ D+FSLDV ++ + P ++ P ++
Sbjct: 45 PNPFSVFRNEISLSTANSSAIESVAP---DFFSLDV----VEAAAEPKTPSVVAEPRKSK 97
Query: 1685 EFES-NKRVLESGWFSANGKFKSPMLQLHKEILDFCEFLSPTLEEQAARNAAVEGVFGVI 1509
+S ++ LES WF N +F+SPMLQLHKEI+DFC+FLSPT EE+ ARN AV+ VF VI
Sbjct: 98 AAQSVSETKLESSWFRGNSRFRSPMLQLHKEIVDFCDFLSPTPEEEDARNTAVKCVFDVI 157
Query: 1508 KHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSKVKTPQIGLVALSRALTQRGIAKKMQV 1329
K+IWPNC VEVFGS+KTGLYLPTSDIDVVI S +K PQIGL ALSRAL+Q+GIAKK+QV
Sbjct: 158 KYIWPNCKVEVFGSYKTGLYLPTSDIDVVIFRSGIKNPQIGLQALSRALSQKGIAKKIQV 217
Query: 1328 IAKARVPIIKFIEKRSGVA 1272
IAKARVPI+KF+EKRSGV+
Sbjct: 218 IAKARVPIVKFVEKRSGVS 236
>ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1|
predicted protein [Populus trichocarpa]
Length = 543
Score = 330 bits (845), Expect(2) = e-146
Identities = 178/291 (61%), Positives = 215/291 (73%), Gaps = 12/291 (4%)
Frame = -3
Query: 1150 AAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKGQY 971
AA FIK+AIS+ P LRPLCLILKVFLQQRELNEVYSGGI SYALL ML+A LQ H
Sbjct: 249 AAEFIKNAISKWPELRPLCLILKVFLQQRELNEVYSGGISSYALLAMLMAMLQNH----- 303
Query: 970 YQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYLLS 791
+ +AS E+NLG+LL++FFDFYGRKLN +VGVSCK GTFF K KGF+N RP+L++
Sbjct: 304 -RECQASLERNLGLLLIHFFDFYGRKLNTTNVGVSCKGTGTFFSKRTKGFMNNGRPFLIA 362
Query: 790 IEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSLGRSRSILGTIIRPDSILLE 611
IEDPQAPENDIG++SFN+ QIRSAF MAF+TLTN KTILSLG +RSILGTIIRPD +LLE
Sbjct: 363 IEDPQAPENDIGKNSFNYFQIRSAFAMAFTTLTNPKTILSLGPNRSILGTIIRPDPVLLE 422
Query: 610 RKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQF-DEEEPLPRQNGNLGEDSLNSS 434
RKGG NGEVTF SLLPGAGEP L +QE++ NWQ DEEE LPR G+ G+ S +SS
Sbjct: 423 RKGGKNGEVTFSSLLPGAGEP-LQSNYGQQEILCNWQLDDEEEALPRGGGDAGDGSAHSS 481
Query: 433 GKRKKVLRE----KRISLSNG-------REVVQRNYHANKLRKRWKSQKNA 314
GK++K + K+ S NG E + + K ++RW+ ++
Sbjct: 482 GKKRKASSKEKSRKKKSKENGDIGKVRHDESGSKKEKSTKKKQRWRKNDSS 532
Score = 216 bits (550), Expect(2) = e-146
Identities = 119/203 (58%), Positives = 147/203 (72%), Gaps = 6/203 (2%)
Frame = -2
Query: 1862 EPYSVFRNQVXXXXXXXXXXXXXXXXXTDYFSLDV-SNDDIDLKVTKQEPPIIPTPIGNR 1686
+PYSVFRN++ D+FSLDV S D+ +L++ + P+ G R
Sbjct: 39 QPYSVFRNEISLSAFNSAAAAESAAP--DFFSLDVGSGDEEELEL---KTPVNGEAKGKR 93
Query: 1685 EFESNKRVL-----ESGWFSANGKFKSPMLQLHKEILDFCEFLSPTLEEQAARNAAVEGV 1521
+ E L ES WF + KF+SPMLQLHKEI+DFC+FLSPT EEQA+R AV V
Sbjct: 94 KAEVETENLPEPMTESVWFRGDSKFRSPMLQLHKEIVDFCDFLSPTQEEQASRAEAVRCV 153
Query: 1520 FGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSKVKTPQIGLVALSRALTQRGIAK 1341
F VIK+IWPNC VEVFGSF+TGLYLPTSDIDVVIL S +K+PQIGL ALSRAL+Q+G+AK
Sbjct: 154 FDVIKYIWPNCKVEVFGSFRTGLYLPTSDIDVVILGSGLKSPQIGLNALSRALSQKGVAK 213
Query: 1340 KMQVIAKARVPIIKFIEKRSGVA 1272
K+QVIA+ARVPI+KF+EKRSGV+
Sbjct: 214 KIQVIARARVPIVKFVEKRSGVS 236
>dbj|BAE71308.1| hypothetical protein [Trifolium pratense]
Length = 518
Score = 311 bits (796), Expect(2) = e-140
Identities = 168/284 (59%), Positives = 209/284 (73%), Gaps = 9/284 (3%)
Frame = -3
Query: 1153 KAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKGQ 974
KAA +I++A+++ P LRPLCLILKVFLQQRELNEVYSGGIGSYALLTML+A L+
Sbjct: 234 KAAEYIQEAVAKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRN----- 288
Query: 973 YYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYLL 794
+ S+ + E NLG+LLV+FFDFYGRKLN DVGVSC GTFF K+ +GF N+ RP+LL
Sbjct: 289 -VRQSQPTAEHNLGVLLVHFFDFYGRKLNTSDVGVSCIGEGTFFRKSSRGFYNKTRPFLL 347
Query: 793 SIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSLGRSRSILGTIIRPDSILL 614
I+DPQ P+NDIG++SFN+ Q+RSAF MAF+TLTN K ILSLG +RSILGTIIRPD +L+
Sbjct: 348 GIQDPQTPDNDIGKNSFNYFQVRSAFLMAFTTLTNPKVILSLGPNRSILGTIIRPDPVLM 407
Query: 613 ERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFD-EEEPLPRQNG-NLGEDSLN 440
ERKGG+NGE+TF+SLLPGAGEP + Q+ E +M+ NWQ D EEEPLPR +G N G +
Sbjct: 408 ERKGGSNGEMTFNSLLPGAGEP-IQQQYGEHDMLCNWQLDFEEEPLPRGDGENTGAEPSR 466
Query: 439 SSGKRK-----KVLREKRISLSN--GREVVQRNYHANKLRKRWK 329
S K+K K +E R S N + + H +KR K
Sbjct: 467 RSSKKKRKSASKENKENRDSRKNKENSSMTENGVHKKHKKKRAK 510
Score = 216 bits (551), Expect(2) = e-140
Identities = 115/197 (58%), Positives = 141/197 (71%)
Frame = -2
Query: 1862 EPYSVFRNQVXXXXXXXXXXXXXXXXXTDYFSLDVSNDDIDLKVTKQEPPIIPTPIGNRE 1683
E YSVFRN++ D+FSLDV+ D+ + + EP P
Sbjct: 32 EQYSVFRNEISLDTPQVDSVYSTAP---DFFSLDVA-DEAEAEDPLPEPKTPAEP--KTP 85
Query: 1682 FESNKRVLESGWFSANGKFKSPMLQLHKEILDFCEFLSPTLEEQAARNAAVEGVFGVIKH 1503
+K LE GWF NGKF+SPMLQLHKEI+DFCEFLSPT EE+A R+AA+E VF VIKH
Sbjct: 86 AIEHKPTLEGGWFRGNGKFRSPMLQLHKEIVDFCEFLSPTPEEKAKRDAAIESVFEVIKH 145
Query: 1502 IWPNCNVEVFGSFKTGLYLPTSDIDVVILDSKVKTPQIGLVALSRALTQRGIAKKMQVIA 1323
IWP+C VE+FGSF+TGLYLPTSDIDVVIL S + PQIGL A+SR+L+QR +AKK+QVI
Sbjct: 146 IWPHCQVEIFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNAISRSLSQRSMAKKIQVIG 205
Query: 1322 KARVPIIKFIEKRSGVA 1272
KARVPIIKF+EK+SG++
Sbjct: 206 KARVPIIKFVEKKSGLS 222
>ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
sativus]
Length = 544
Score = 312 bits (800), Expect(2) = e-140
Identities = 169/279 (60%), Positives = 203/279 (72%), Gaps = 1/279 (0%)
Frame = -3
Query: 1153 KAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKGQ 974
KAA FIK A+S+ P LRPLCLILKVFLQQRELNEVYSGG+GSYALLTML+A LQ
Sbjct: 249 KAADFIKGAVSKWPPLRPLCLILKVFLQQRELNEVYSGGLGSYALLTMLMAMLQS----- 303
Query: 973 YYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYLL 794
+S E NLG+LLV+FFDFYGRKLN DVGVSC G FF K+ +GF+ + RP LL
Sbjct: 304 -INVPPSSLEHNLGVLLVHFFDFYGRKLNTSDVGVSCNAGGIFFSKSYRGFMTKGRPCLL 362
Query: 793 SIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTILSLGRSRSILGTIIRPDSILL 614
SIEDPQAP+NDIG++SFN+ QIRSAF MA+S LTN KT+L LG +RSILGTIIRPD +LL
Sbjct: 363 SIEDPQAPDNDIGKNSFNYFQIRSAFAMAYSILTNVKTVLGLGPNRSILGTIIRPDPVLL 422
Query: 613 ERKGGANGEVTFDSLLPGAGEPLLAQEQ-SEQEMMFNWQFDEEEPLPRQNGNLGEDSLNS 437
+RKGG +GEVTF+SLLPGAGEP+ E +QEM+ NWQF +EEPLPR N + E+
Sbjct: 423 KRKGGRHGEVTFNSLLPGAGEPVQQPEYGDDQEMLCNWQFGDEEPLPRGN-DTPENVGTP 481
Query: 436 SGKRKKVLREKRISLSNGREVVQRNYHANKLRKRWKSQK 320
S K+++ REK +R + N RK S+K
Sbjct: 482 SSKKQRKTREKSRKKEKESHSSKRRHEDNGSRKEQSSKK 520
Score = 214 bits (545), Expect(2) = e-140
Identities = 117/202 (57%), Positives = 143/202 (70%), Gaps = 5/202 (2%)
Frame = -2
Query: 1862 EPYSVFRNQVXXXXXXXXXXXXXXXXXTDYFSLDVSND--DIDLKVTKQEPPI---IPTP 1698
EPYSVFRN++ ++F+LDV+ D + + + P+ + T
Sbjct: 40 EPYSVFRNEISLSTPDCAPAETAAT---EFFALDVAADKGEENSGICSSPLPVTSALETE 96
Query: 1697 IGNREFESNKRVLESGWFSANGKFKSPMLQLHKEILDFCEFLSPTLEEQAARNAAVEGVF 1518
E E R LESGWF N KSPMLQLHKEI+DFCEFLSPT EE+ AR++AVE VF
Sbjct: 97 PRTPECEDQSR-LESGWFRGNSGLKSPMLQLHKEIVDFCEFLSPTEEERVARDSAVERVF 155
Query: 1517 GVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSKVKTPQIGLVALSRALTQRGIAKK 1338
V+KHIWP+C VEVFGSF+TGLYLPTSDIDVVIL S + PQ+GL ALSRAL+Q+GIAKK
Sbjct: 156 SVVKHIWPHCKVEVFGSFQTGLYLPTSDIDVVILGSGIPKPQLGLQALSRALSQKGIAKK 215
Query: 1337 MQVIAKARVPIIKFIEKRSGVA 1272
+QVI KARVPIIKFIEK+SG++
Sbjct: 216 IQVIGKARVPIIKFIEKQSGIS 237