BLASTX nr result

ID: Coptis23_contig00008930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008930
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520606.1| PREDICTED: uncharacterized protein LOC100306...   130   2e-28
ref|XP_003554077.1| PREDICTED: uncharacterized protein LOC100305...   130   3e-28
ref|XP_004149394.1| PREDICTED: uncharacterized protein LOC101213...   127   2e-27
ref|XP_003546658.1| PREDICTED: uncharacterized protein LOC100801...   127   3e-27
gb|ABK93193.1| unknown [Populus trichocarpa]                          127   3e-27

>ref|XP_003520606.1| PREDICTED: uncharacterized protein LOC100306564 [Glycine max]
           gi|255628891|gb|ACU14790.1| unknown [Glycine max]
          Length = 79

 Score =  130 bits (328), Expect = 2e-28
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = -2

Query: 654 MTGAKIVGALVGSGVIAYVCDVVISDKKIFGGTTPSTITNKEWAEETDKKLQAWPRTAGP 475
           M+G  I+ A++GS  +A+VCD  +SDKK+FGG+TP TITN EWAEETDKKLQAWPRTAGP
Sbjct: 1   MSGKYIISAILGSFGVAWVCDYYVSDKKLFGGSTPGTITNNEWAEETDKKLQAWPRTAGP 60

Query: 474 PVVMNPISRQNFIVKSRVE 418
           PVVMNPISRQNFIVKSR E
Sbjct: 61  PVVMNPISRQNFIVKSRAE 79


>ref|XP_003554077.1| PREDICTED: uncharacterized protein LOC100305508 [Glycine max]
           gi|255625729|gb|ACU13209.1| unknown [Glycine max]
          Length = 79

 Score =  130 bits (327), Expect = 3e-28
 Identities = 61/79 (77%), Positives = 69/79 (87%)
 Frame = -2

Query: 654 MTGAKIVGALVGSGVIAYVCDVVISDKKIFGGTTPSTITNKEWAEETDKKLQAWPRTAGP 475
           M+G  IV A++GS  +A+VCD  +S+KK+FGGTTP TITN EWAEETDKKLQAWPRTAGP
Sbjct: 1   MSGKYIVSAILGSFGVAWVCDYYVSEKKLFGGTTPGTITNNEWAEETDKKLQAWPRTAGP 60

Query: 474 PVVMNPISRQNFIVKSRVE 418
           PVVMNPISRQNFIVKSR E
Sbjct: 61  PVVMNPISRQNFIVKSRPE 79


>ref|XP_004149394.1| PREDICTED: uncharacterized protein LOC101213065 isoform 1 [Cucumis
           sativus] gi|449463346|ref|XP_004149395.1| PREDICTED:
           uncharacterized protein LOC101213065 isoform 2 [Cucumis
           sativus] gi|449463348|ref|XP_004149396.1| PREDICTED:
           uncharacterized protein LOC101213065 isoform 3 [Cucumis
           sativus] gi|449510545|ref|XP_004163695.1| PREDICTED:
           uncharacterized LOC101213065 [Cucumis sativus]
          Length = 80

 Score =  127 bits (320), Expect = 2e-27
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = -2

Query: 654 MTGAKIVGALVGSGVIAYVCDVVISDKKIFGGTTPSTITNKEWAEETDKKLQAWPRTAGP 475
           M    IVG+L+G+  +AY+CD +ISDKKIFGGTTPST++N EW EETDKK QAWPRTAGP
Sbjct: 1   MAAKYIVGSLLGACGVAYICDHLISDKKIFGGTTPSTVSNSEWLEETDKKFQAWPRTAGP 60

Query: 474 PVVMNPISRQNFIVKSRVE 418
           PVVMNPISRQNFIVK+R E
Sbjct: 61  PVVMNPISRQNFIVKTRPE 79


>ref|XP_003546658.1| PREDICTED: uncharacterized protein LOC100801600 [Glycine max]
          Length = 79

 Score =  127 bits (318), Expect = 3e-27
 Identities = 58/79 (73%), Positives = 69/79 (87%)
 Frame = -2

Query: 654 MTGAKIVGALVGSGVIAYVCDVVISDKKIFGGTTPSTITNKEWAEETDKKLQAWPRTAGP 475
           M+G  I+ A++GS  +A+VCD  +S+KK+FGG+TP TITN EWAEETDKKLQAWPRTAGP
Sbjct: 1   MSGKYIISAILGSFGVAWVCDYYVSEKKLFGGSTPGTITNNEWAEETDKKLQAWPRTAGP 60

Query: 474 PVVMNPISRQNFIVKSRVE 418
           PVVMNPISR+NFIVKSR E
Sbjct: 61  PVVMNPISRRNFIVKSRPE 79


>gb|ABK93193.1| unknown [Populus trichocarpa]
          Length = 79

 Score =  127 bits (318), Expect = 3e-27
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -2

Query: 654 MTGAKIVGALVGSGVIAYVCDVVISDKKIFGGTTPSTITNKEWAEETDKKLQAWPRTAGP 475
           M+   IV ALVGS  IAYVCD V+SDKKIFGGTTP T++NKEW EETDKK QAWPRT GP
Sbjct: 1   MSTKYIVSALVGSFAIAYVCDYVVSDKKIFGGTTPRTVSNKEWWEETDKKFQAWPRTGGP 60

Query: 474 PVVMNPISRQNFIVKSR 424
           PVVMNPI+RQNFIVKS+
Sbjct: 61  PVVMNPITRQNFIVKSQ 77


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