BLASTX nr result

ID: Coptis23_contig00008921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008921
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   140   1e-31
ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3...   138   5e-31
ref|XP_003530789.1| PREDICTED: ABC transporter C family member 3...   137   7e-31
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   137   9e-31
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   136   2e-30

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/125 (56%), Positives = 89/125 (71%), Gaps = 8/125 (6%)
 Frame = -2

Query: 356  HYWLALET--SNDAK------TLILIYVALACGSCICVFVRAILVLTVGYKTATLLFQNM 201
            +YW+A  T  S DAK      TLI++YVALA GS  C+  R+ L++T GYKTATLLF  M
Sbjct: 770  NYWMAWATPVSKDAKPAVSGSTLIIVYVALAIGSSFCILARSTLLVTAGYKTATLLFNKM 829

Query: 200  HSCVFRAPMSFFDATPSGRIISRVAGDQNYVDMSIPFLFGTFFVASIQLLGVIGVMARGT 21
            H C+FRAPMSFFDATPSGRI++R + DQ+ VDM IP+  G    + IQLLG+I VM++  
Sbjct: 830  HLCIFRAPMSFFDATPSGRILNRASTDQSAVDMQIPYQVGAVAFSMIQLLGIIAVMSQVA 889

Query: 20   WQILI 6
            WQ+ I
Sbjct: 890  WQVFI 894


>ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1490

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/125 (53%), Positives = 91/125 (72%), Gaps = 8/125 (6%)
 Frame = -2

Query: 356  HYWLALET--SNDAK------TLILIYVALACGSCICVFVRAILVLTVGYKTATLLFQNM 201
            +YW+A  T  S D +      TLI++YV LA GS  CV VR++L++TVGYKTAT+LF  M
Sbjct: 939  NYWMAWATPISTDVEPPVGGTTLIVVYVVLAVGSSFCVLVRSMLLVTVGYKTATILFNKM 998

Query: 200  HSCVFRAPMSFFDATPSGRIISRVAGDQNYVDMSIPFLFGTFFVASIQLLGVIGVMARGT 21
            H C+FRAPMSFFD+TPSGR+++R + DQ+ VD  IP+  G+F  + IQLLG+I VM++  
Sbjct: 999  HFCIFRAPMSFFDSTPSGRVLNRASTDQSTVDTDIPYQIGSFAFSMIQLLGIIAVMSQVA 1058

Query: 20   WQILI 6
            WQ+ I
Sbjct: 1059 WQVFI 1063


>ref|XP_003530789.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1496

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/125 (55%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
 Frame = -2

Query: 356  HYWLAL--------ETSNDAKTLILIYVALACGSCICVFVRAILVLTVGYKTATLLFQNM 201
            +YW+AL        E S     LI++YVALA GS +CV  RA LV T GYKTATLLF NM
Sbjct: 947  NYWMALVTPISTDVEPSVGGSMLIVVYVALAIGSSVCVLARATLVATAGYKTATLLFNNM 1006

Query: 200  HSCVFRAPMSFFDATPSGRIISRVAGDQNYVDMSIPFLFGTFFVASIQLLGVIGVMARGT 21
            H C+FRAPMSFFDATPSGRI++R + DQ+ VD+ IPF  G+   + + LLG+I VM++  
Sbjct: 1007 HFCIFRAPMSFFDATPSGRILNRASTDQSAVDIDIPFQAGSLASSVVHLLGIIVVMSQVA 1066

Query: 20   WQILI 6
            WQ+ I
Sbjct: 1067 WQVFI 1071


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/125 (52%), Positives = 89/125 (71%), Gaps = 8/125 (6%)
 Frame = -2

Query: 356  HYWLALETSNDAK--------TLILIYVALACGSCICVFVRAILVLTVGYKTATLLFQNM 201
            +YW+A  T   A+        TLI +YV  A GS +C+ VRA+L++TVGYKTAT+LF  M
Sbjct: 975  NYWMAWATPISAEVEPPVEGTTLIEVYVGFAIGSSLCILVRALLLVTVGYKTATILFNKM 1034

Query: 200  HSCVFRAPMSFFDATPSGRIISRVAGDQNYVDMSIPFLFGTFFVASIQLLGVIGVMARGT 21
            H C+FRAPMSFFD+TPSGRI++R + DQ+ VD  IP+  G+F  + IQLLG+I VM++  
Sbjct: 1035 HLCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSIIQLLGIIAVMSQVA 1094

Query: 20   WQILI 6
            WQ+ I
Sbjct: 1095 WQVFI 1099


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 8/125 (6%)
 Frame = -2

Query: 356  HYWLALET--SNDAK------TLILIYVALACGSCICVFVRAILVLTVGYKTATLLFQNM 201
            +YW+A  +  S+D K      TLI++YVALA GS  CV  RA+L++T GYKTAT+LF  M
Sbjct: 937  NYWMAWASPVSDDVKPAVRGSTLIIVYVALAVGSSFCVLSRAMLLVTAGYKTATILFNKM 996

Query: 200  HSCVFRAPMSFFDATPSGRIISRVAGDQNYVDMSIPFLFGTFFVASIQLLGVIGVMARGT 21
            H CVFRAPMSFFDATPSGRI++R + DQ+ +D ++P   G F    IQLLG+I VM++  
Sbjct: 997  HLCVFRAPMSFFDATPSGRILNRASADQSTIDTTMPMQVGAFAFQLIQLLGIIAVMSQVA 1056

Query: 20   WQILI 6
            WQ+ I
Sbjct: 1057 WQVFI 1061


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