BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008910
         (2163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520668.1| nucleic acid binding protein, putative [Rici...   443   e-121
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin...   441   e-121
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   437   e-120
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   434   e-119
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   429   e-117

>ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223540053|gb|EEF41630.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 478

 Score =  443 bits (1139), Expect = e-121
 Identities = 216/374 (57%), Positives = 254/374 (67%), Gaps = 8/374 (2%)
 Frame = +3

Query: 264  SQTGLEESMRKLGLDEK---ELYPERLSEPNCVYYMRTGSCGYGDRCRFNHPRNRALVVG 434
            ++TGLEESM +LGL+     E YPER   P+CVYYMRTG CGYG+RCR+NHPRNRA V  
Sbjct: 26   AETGLEESMWRLGLNNSGGGESYPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAVEA 85

Query: 435  TVTEGVEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGE 614
             V    EYPER G+P C+FYLKTGTCKFGA CKFHHPK+ GG +  V LN +GYPLRPGE
Sbjct: 86   AVRATGEYPERIGEPSCEFYLKTGTCKFGASCKFHHPKHGGGSLSHVPLNTHGYPLRPGE 145

Query: 615  NECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPAFYQTVQSSLVPSSQHYEVAPNWQV 794
            NECSYY+KTGQCKFGI CKFHHPQPAG+S+   AP FYQ VQS  +P    Y  A     
Sbjct: 146  NECSYYLKTGQCKFGITCKFHHPQPAGSSLPESAPQFYQPVQSPSIPIPDQYGGASASLR 205

Query: 795  TRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSIIGPGSFYGVTQ 971
             RPPL+ GSY+QGAYG  VL   G+VP+P W+ Y               +G  S YGVTQ
Sbjct: 206  VRPPLLPGSYVQGAYG-PVLFSPGVVPIPGWSPYSAPVSPVLSPSAQPAVGATSLYGVTQ 264

Query: 972  VSSSAPS----YTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHCKYGSSCR 1139
            +SSS P+    Y               G Q E TFPERPG+PEC YY+R G CK+GSSCR
Sbjct: 265  LSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYLRTGDCKFGSSCR 324

Query: 1140 YHHPPERLMPSTSYVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGTLXXXXXX 1319
            YHHP +R++P T+ VLS +GLPLRPGA  C+ Y++ G C+FG TCK+DHPM T+      
Sbjct: 325  YHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYLRNGHCKFGSTCKFDHPMETMRYSPSA 384

Query: 1320 XXLADMPVAPYPVG 1361
              L DMPVAPYPVG
Sbjct: 385  SSLIDMPVAPYPVG 398


>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
            [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
            protein product [Vitis vinifera]
          Length = 475

 Score =  441 bits (1133), Expect = e-121
 Identities = 227/448 (50%), Positives = 280/448 (62%), Gaps = 11/448 (2%)
 Frame = +3

Query: 240  TQSDP-----PHYSQTGLEESMRKLGLDEKELYPERLSEPNCVYYMRTGSCGYGDRCRFN 404
            +QSDP     P  + +GLEESM +LGL  +E YPER    +CVYYM+TG CG+G RCR+N
Sbjct: 13   SQSDPSVEWSPVRAVSGLEESMWRLGLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYN 72

Query: 405  HPRNRALVVGTVTEGVEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLN 584
            HPR+R+ V    + G EYPER G+P C+FYLKTGTCKFGA C+FHHP+N GG +  VSLN
Sbjct: 73   HPRDRSSVSTLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLN 132

Query: 585  ANGYPLRPGENECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPAFYQTVQSSLVPS-S 761
              GYPLR GE ECSYY+KTGQCKFGI CKFHHPQPAGTS+ A AP FY TVQS  VP+ +
Sbjct: 133  IYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPTFYPTVQSPSVPTPT 192

Query: 762  QHYEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSI 938
            Q+   + +W+V RPP++ GSY+QG YG  VL P G+VP+P W+ Y               
Sbjct: 193  QYGGTSTSWRVPRPPVLPGSYVQGPYG-PVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPT 251

Query: 939  IGPGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHC 1118
            +G GS YGVTQ+ S+  +  G               Q E  FPERPGQ EC YY+R G C
Sbjct: 252  VGAGSVYGVTQLPST-HTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDC 310

Query: 1119 KYGSSCRYHHPPERLMPSTSYVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGT 1298
            K+GSSCRYHHP E ++P T+ VLS +GLPLRPG  PC+ Y+Q G C+FG TCK+DHP+G 
Sbjct: 311  KFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGN 370

Query: 1299 LXXXXXXXXLADMPVAPYPVGXXXXXXXXXXXXXXXQIDVITGF-KNSISPRVPXXXXXX 1475
            +        L DMPVAPYPVG               + D I+G  K+S S R+P      
Sbjct: 371  MRYSPSASSLTDMPVAPYPVGSSLATLAPSFSSSDLRPDFISGSKKDSHSTRMPSSGNTT 430

Query: 1476 XXXXXXXXXXXXPIL---VNLSGPSSSP 1550
                         +    V LSG SS+P
Sbjct: 431  SSSVGLIFSQTGSVSLSDVQLSGQSSAP 458


>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
            vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
            product [Vitis vinifera]
          Length = 478

 Score =  437 bits (1123), Expect = e-120
 Identities = 222/411 (54%), Positives = 261/411 (63%), Gaps = 14/411 (3%)
 Frame = +3

Query: 264  SQTGLEESMRKLGLDEK-ELYPERLSEPNCVYYMRTGSCGYGDRCRFNHPRNRALVVGTV 440
            ++TGLEE + +LGL    E YPER  E +C+YY++TG CGYG RCRFNHPR+R  V GTV
Sbjct: 26   AETGLEEPLWQLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTV 85

Query: 441  TEGV-EYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGEN 617
              G  E+PER GQPVC+FY+KTGTCKFGA CK+HHP+  GG +  V+LN  GYPLRPGE 
Sbjct: 86   RPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEK 145

Query: 618  ECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPA----------FYQTVQSSLVPSSQH 767
            ECSYYVKTG CKFG  CKFHHPQP    +S P PA           Y TVQS  VPSSQ 
Sbjct: 146  ECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPTVQSPSVPSSQQ 205

Query: 768  YEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSIIG 944
            Y +     V RPPL+  SY  G Y   VL+P GMVP P W+ Y           T   +G
Sbjct: 206  YGLV----VARPPLLPSSYFHGPYSP-VLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVG 260

Query: 945  PGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHCKY 1124
             G  YG+T +S SAP+YTG               Q E  FPERPGQPEC YY+R G CK+
Sbjct: 261  SGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKF 320

Query: 1125 GSSCRYHHPPERLMPSTSYVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGTLX 1304
            GSSC+YHHPPE   P T+ VLS MGLPLRPGAP C+ Y Q G+C+FGPTCK+DHPMGTL 
Sbjct: 321  GSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLS 380

Query: 1305 XXXXXXXLADMPVAPYPVGXXXXXXXXXXXXXXXQIDVITG-FKNSISPRV 1454
                   LADMPVAPYPVG               + ++I+G  K S+S R+
Sbjct: 381  YSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPELISGSSKESLSTRM 431


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  434 bits (1117), Expect = e-119
 Identities = 221/411 (53%), Positives = 260/411 (63%), Gaps = 14/411 (3%)
 Frame = +3

Query: 264  SQTGLEESMRKLGLDEK-ELYPERLSEPNCVYYMRTGSCGYGDRCRFNHPRNRALVVGTV 440
            ++TGLEE +  LGL    E YPER  E +C+YY++TG CGYG RCRFNHPR+R  V GTV
Sbjct: 66   AETGLEEPLWXLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTV 125

Query: 441  TEGV-EYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGAVSLNANGYPLRPGEN 617
              G  E+PER GQPVC+FY+KTGTCKFGA CK+HHP+  GG +  V+LN  GYPLRPGE 
Sbjct: 126  RPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEK 185

Query: 618  ECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPA----------FYQTVQSSLVPSSQH 767
            ECSYYVKTG CKFG  CKFHHPQP    +S P PA           Y  VQS  VPSSQ 
Sbjct: 186  ECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPXVQSPSVPSSQQ 245

Query: 768  YEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSIIG 944
            Y +     V RPPL+  SY+ G Y   VL+P GMVP P W+ Y           T   +G
Sbjct: 246  YGLV----VARPPLLPSSYIHGPYSP-VLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVG 300

Query: 945  PGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHCKY 1124
             G  YG+T +S SAP+YTG               Q E  FPERPGQPEC YY+R G CK+
Sbjct: 301  SGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKF 360

Query: 1125 GSSCRYHHPPERLMPSTSYVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGTLX 1304
            GSSC+YHHPPE   P T+ VLS MGLPLRPGAP C+ Y Q G+C+FGPTCK+DHPMGTL 
Sbjct: 361  GSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLS 420

Query: 1305 XXXXXXXLADMPVAPYPVGXXXXXXXXXXXXXXXQIDVITG-FKNSISPRV 1454
                   LADMPVAPYPVG               + ++I+G  K S+S R+
Sbjct: 421  YSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPELISGSSKESLSTRM 471


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  429 bits (1104), Expect = e-117
 Identities = 216/402 (53%), Positives = 259/402 (64%), Gaps = 22/402 (5%)
 Frame = +3

Query: 222  METYTK----TQSDPP-----HYSQTGLEESMRKLGLDEKEL-YPERLSEPNCVYYMRTG 371
            M+ Y++    +QSDP         +TGLEE + +LGL E E  YPER +E +C+YY+RTG
Sbjct: 1    MDRYSRGQEGSQSDPALEWTGSGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTG 60

Query: 372  SCGYGDRCRFNHPRNRALVVGTVTEG-VEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPK 548
             CGYG RCR+NHPR+R  V+G    G  EYPER GQP+C++Y++TGTCKFGA CK+HHPK
Sbjct: 61   FCGYGARCRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPK 120

Query: 549  NVGGIIGAVSLNANGYPLRPGENECSYYVKTGQCKFGIACKFHHPQPAGTSVSA------ 710
              GG    VSLN  GYPLRPGE EC+YY+KTGQCKFG  CKFHHPQP    + A      
Sbjct: 121  QGGGSASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQ 180

Query: 711  ----PAPAFYQTVQSSLVPSSQHYEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPM 878
                P P  Y +VQS  VPSSQ Y V     V RPPL+ GSY+QG YG  +L PS +VP 
Sbjct: 181  IAPVPGPTLYPSVQSPSVPSSQQYGV----MVARPPLLPGSYVQGPYGPVLLSPS-VVPY 235

Query: 879  P-WNTYXXXXXXXXXXXTHSIIGPGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNE 1055
            P WN Y           T   +G GS YG++ +S SAP+YTG               Q E
Sbjct: 236  PSWNPYPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKE 295

Query: 1056 STFPERPGQPECIYYVRNGHCKYGSSCRYHHPPERLMPSTSYVLSHMGLPLRPGAPPCSL 1235
              FPERPGQPEC YY++ G CK+ SSCRYHHPPE ++  ++ VLS +GLPLRPGAP CS 
Sbjct: 296  HLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSH 355

Query: 1236 YVQYGVCEFGPTCKYDHPMGTLXXXXXXXXLADMPVAPYPVG 1361
            Y Q G C+FGP CK+DHPMGTL        LADMPVAPY VG
Sbjct: 356  YTQRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYLVG 397