BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008907
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...    72   2e-20
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...    72   7e-19
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-16
ref|NP_172560.2| pentatricopeptide repeat-containing protein [Ar...    65   1e-15
gb|AAB65486.1| membrane-associated salt-inducible protein isolog...    65   1e-15

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score = 72.4 bits (176), Expect(2) = 2e-20
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = -3

Query: 195 HERYDLVMLNTMLRAYCKAGEMESVMQMLRKMDELKISPDF 73
           +++YDLVMLNTML AYC+AGEMESVMQM+RKMDEL ISPD+
Sbjct: 411 YDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAISPDW 451



 Score = 51.2 bits (121), Expect(2) = 2e-20
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = -2

Query: 85  ISRFWNTFHILIKYFYKEKLYQLAYRTM 2
           IS  WNTFHILIKYF KEKLY LAYRTM
Sbjct: 447 ISPDWNTFHILIKYFCKEKLYLLAYRTM 474


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score = 71.6 bits (174), Expect(2) = 7e-19
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -3

Query: 195 HERYDLVMLNTMLRAYCKAGEMESVMQMLRKMDELKISPDF 73
           ++RYD+V+LNTML AYC+AGEMESVMQMLRKMD+L ISPD+
Sbjct: 413 YDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY 453



 Score = 47.0 bits (110), Expect(2) = 7e-19
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 85  ISRFWNTFHILIKYFYKEKLYQLAYRTM 2
           IS  +NTFHILIKYF+KEKLY L YRT+
Sbjct: 449 ISPDYNTFHILIKYFFKEKLYLLCYRTL 476


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 61.2 bits (147), Expect(2) = 8e-16
 Identities = 26/41 (63%), Positives = 36/41 (87%)
 Frame = -3

Query: 195 HERYDLVMLNTMLRAYCKAGEMESVMQMLRKMDELKISPDF 73
           +++YD+V+LNT+L AYC+ GE ESVM+ +RKMDEL ISPD+
Sbjct: 314 YDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPDY 354



 Score = 47.0 bits (110), Expect(2) = 8e-16
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 85  ISRFWNTFHILIKYFYKEKLYQLAYRTM 2
           IS  +NTFHILIKYF KEKLY LAY+TM
Sbjct: 350 ISPDYNTFHILIKYFCKEKLYMLAYQTM 377


>ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g10910, chloroplastic; Flags: Precursor
           gi|110741600|dbj|BAE98748.1| membrane-associated
           salt-inducible protein isolog [Arabidopsis thaliana]
           gi|332190541|gb|AEE28662.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 664

 Score = 65.5 bits (158), Expect(2) = 1e-15
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = -3

Query: 195 HERYDLVMLNTMLRAYCKAGEMESVMQMLRKMDELKISPDF 73
           +E+ DLVMLNTML AYC+AGEMESVM+M++KMDE  +SPD+
Sbjct: 407 YEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447



 Score = 42.4 bits (98), Expect(2) = 1e-15
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -2

Query: 85  ISRFWNTFHILIKYFYKEKLYQLAYRT 5
           +S  +NTFHILIKYF KEKL+ LAY+T
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQT 469


>gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
           [Arabidopsis thaliana]
          Length = 652

 Score = 65.5 bits (158), Expect(2) = 1e-15
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = -3

Query: 195 HERYDLVMLNTMLRAYCKAGEMESVMQMLRKMDELKISPDF 73
           +E+ DLVMLNTML AYC+AGEMESVM+M++KMDE  +SPD+
Sbjct: 407 YEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447



 Score = 42.4 bits (98), Expect(2) = 1e-15
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -2

Query: 85  ISRFWNTFHILIKYFYKEKLYQLAYRT 5
           +S  +NTFHILIKYF KEKL+ LAY+T
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQT 469