BLASTX nr result

ID: Coptis23_contig00008901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008901
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus co...    77   2e-26
ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla...    76   2e-25
emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera]    76   2e-25
ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-25
ref|XP_003601652.1| Cysteine desulfurase [Medicago truncatula] g...    76   1e-24

>ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223537525|gb|EEF39150.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 469

 Score = 77.0 bits (188), Expect(2) = 2e-26
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +2

Query: 110 SGHHCAQPLHRYLGINAGAHASLHFYNTKEDVDAFIRALKGT 235
           SGHHCAQPLHR+LG+NA A ASLHFYNTKEDVD FI+AL  T
Sbjct: 420 SGHHCAQPLHRHLGVNASARASLHFYNTKEDVDDFIQALNDT 461



 Score = 67.0 bits (162), Expect(2) = 2e-26
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   IYGPVPSEHVSRAALCLFNVENIHPTDIATFLDREYQVII 122
           IYGP PSE+V RAALC FNVENIHPTDIATFLD+++ V I
Sbjct: 379 IYGPKPSENVHRAALCSFNVENIHPTDIATFLDQQHGVAI 418


>ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera]
           gi|296083920|emb|CBI24308.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score = 76.3 bits (186), Expect(2) = 2e-25
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +2

Query: 110 SGHHCAQPLHRYLGINAGAHASLHFYNTKEDVDAFIRALKGT 235
           SGHHCAQPLHR+LG++A A ASLHFYNTKEDVDAFI AL  T
Sbjct: 414 SGHHCAQPLHRHLGVSASARASLHFYNTKEDVDAFIHALVDT 455



 Score = 64.7 bits (156), Expect(2) = 2e-25
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   IYGPVPSEHVSRAALCLFNVENIHPTDIATFLDREYQVII 122
           +YGP PS+ V RAALC FNVENIHPTDIATFLD+++ V I
Sbjct: 373 VYGPAPSQTVFRAALCSFNVENIHPTDIATFLDQQHGVAI 412


>emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera]
          Length = 427

 Score = 76.3 bits (186), Expect(2) = 2e-25
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +2

Query: 110 SGHHCAQPLHRYLGINAGAHASLHFYNTKEDVDAFIRALKGT 235
           SGHHCAQPLHR+LG++A A ASLHFYNTKEDVDAFI AL  T
Sbjct: 378 SGHHCAQPLHRHLGVSASARASLHFYNTKEDVDAFIHALVDT 419



 Score = 64.7 bits (156), Expect(2) = 2e-25
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   IYGPVPSEHVSRAALCLFNVENIHPTDIATFLDREYQVII 122
           +YGP PS+ V RAALC FNVENIHPTDIATFLD+++ V I
Sbjct: 337 VYGPAPSQTVFRAALCSFNVENIHPTDIATFLDQQHGVAI 376


>ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|222850426|gb|EEE87973.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 76.6 bits (187), Expect(2) = 5e-25
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = +2

Query: 110 SGHHCAQPLHRYLGINAGAHASLHFYNTKEDVDAFIRALKGT 235
           SGHHCAQPLHRYLGINA A ASL+FYNTKEDVD FI AL  T
Sbjct: 420 SGHHCAQPLHRYLGINASARASLYFYNTKEDVDYFIHALNDT 461



 Score = 62.8 bits (151), Expect(2) = 5e-25
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   IYGPVPSEHVSRAALCLFNVENIHPTDIATFLDREYQVII 122
           IYGP PS+ V+RAALC FNV+NIHPTD+ATFLD+++ V I
Sbjct: 379 IYGPKPSKGVNRAALCSFNVKNIHPTDLATFLDQQHGVAI 418


>ref|XP_003601652.1| Cysteine desulfurase [Medicago truncatula]
           gi|355490700|gb|AES71903.1| Cysteine desulfurase
           [Medicago truncatula]
          Length = 117

 Score = 75.9 bits (185), Expect(2) = 1e-24
 Identities = 34/42 (80%), Positives = 36/42 (85%)
 Frame = +2

Query: 110 SGHHCAQPLHRYLGINAGAHASLHFYNTKEDVDAFIRALKGT 235
           SGHHCAQPLHRYLG+NA A ASL+FYNTKEDVD FI AL  T
Sbjct: 68  SGHHCAQPLHRYLGVNASARASLYFYNTKEDVDNFIHALHDT 109



 Score = 62.4 bits (150), Expect(2) = 1e-24
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   IYGPVPSEHVSRAALCLFNVENIHPTDIATFLDREYQVII 122
           IYGP PS+ V RA+LC FNV+N+HPTD+ATFLD+++ V I
Sbjct: 27  IYGPAPSKEVKRASLCSFNVDNLHPTDLATFLDQQHGVAI 66


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