BLASTX nr result

ID: Coptis23_contig00008899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008899
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272614.1| PREDICTED: auxin-induced protein 6B-like [Vi...    96   4e-18
emb|CAN76261.1| hypothetical protein VITISV_018522 [Vitis vinifera]    93   2e-17
ref|XP_002329465.1| SAUR family protein [Populus trichocarpa] gi...    93   3e-17
ref|XP_002300214.1| SAUR family protein [Populus trichocarpa] gi...    92   6e-17
ref|NP_001048241.1| Os02g0769100 [Oryza sativa Japonica Group] g...    82   3e-14

>ref|XP_002272614.1| PREDICTED: auxin-induced protein 6B-like [Vitis vinifera]
          Length = 103

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/80 (56%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = +2

Query: 68  EKKKTNRVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYEDLLEKSQEMYG-SNKGLL 244
           +++K  +V+KGW+AV VGLE+E+GGFQ F IPIS L HPL++ LLEK+QE+YG    G L
Sbjct: 2   QEEKKMKVKKGWLAVEVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAQEVYGFHTAGPL 61

Query: 245 RLPCSVEEFENLKLKVEQES 304
           RLPCSV++F +L+ ++E+E+
Sbjct: 62  RLPCSVDDFLHLRWRIEREN 81


>emb|CAN76261.1| hypothetical protein VITISV_018522 [Vitis vinifera]
          Length = 97

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/74 (59%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +2

Query: 86  RVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYEDLLEKSQEMYG-SNKGLLRLPCSV 262
           +V+KGW+AV VGLE+E+GGFQ F IPIS L HPL++ LLEK+QE+YG    G LRLPCSV
Sbjct: 2   KVKKGWLAVEVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAQEVYGFHTAGPLRLPCSV 61

Query: 263 EEFENLKLKVEQES 304
           ++F +L+ ++E+E+
Sbjct: 62  DDFLHLRWRIEREN 75


>ref|XP_002329465.1| SAUR family protein [Populus trichocarpa]
           gi|222870145|gb|EEF07276.1| SAUR family protein [Populus
           trichocarpa]
          Length = 105

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
 Frame = +2

Query: 56  NGSPEKKKTNRVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYEDLLEKSQEMYG-SN 232
           N   +KKK   V+KGW+AVRVGLE+E+GGFQ F IPIS L HPL++ LLEK+ E+YG   
Sbjct: 3   NTQEDKKK---VKKGWLAVRVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAHEVYGYHT 59

Query: 233 KGLLRLPCSVEEFENLKLKVEQES 304
            G L LPCSV++F +L+ ++E+ES
Sbjct: 60  TGPLWLPCSVDDFLHLRWRIERES 83


>ref|XP_002300214.1| SAUR family protein [Populus trichocarpa]
           gi|222847472|gb|EEE85019.1| SAUR family protein [Populus
           trichocarpa]
          Length = 106

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/80 (55%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = +2

Query: 68  EKKKTNRVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYEDLLEKSQEMYG-SNKGLL 244
           ++ K ++V+KGW+AVRVGLE E+ GFQ F IPIS L HPL++ LLEK+ E+YG    G L
Sbjct: 5   QEDKKSKVKKGWLAVRVGLEDEDCGFQRFVIPISYLYHPLFKRLLEKAHEVYGYHTTGPL 64

Query: 245 RLPCSVEEFENLKLKVEQES 304
           R+PCSV++F +L+ ++E+ES
Sbjct: 65  RVPCSVDDFLHLRWRIEKES 84


>ref|NP_001048241.1| Os02g0769100 [Oryza sativa Japonica Group]
           gi|46805402|dbj|BAD16904.1| unknown protein [Oryza
           sativa Japonica Group] gi|46805457|dbj|BAD16939.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113537772|dbj|BAF10155.1| Os02g0769100 [Oryza sativa
           Japonica Group] gi|215766008|dbj|BAG98236.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 128

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
 Frame = +2

Query: 68  EKKKTNRVRKGWIAVRVGLEKEE----GGFQTFSIPISDLCHPLYEDLLEKSQEMYG-SN 232
           E+KK  +V+KGW+AVRVG+E  +    GGF+ F IPI+ L HPL+  LLE +++ YG  +
Sbjct: 5   EEKKAGKVKKGWLAVRVGVEGADGGDGGGFRRFVIPIAYLYHPLFRRLLEAARDAYGYDS 64

Query: 233 KGLLRLPCSVEEFENLKLKVEQES 304
            G LRLPCSV+EF  L+  VE+E+
Sbjct: 65  AGPLRLPCSVDEFLRLRSLVERET 88


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