BLASTX nr result

ID: Coptis23_contig00008897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008897
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...   187   3e-45
ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245...   183   7e-44
emb|CBI23587.3| unnamed protein product [Vitis vinifera]              182   9e-44
ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...   180   6e-43
gb|ABK92988.1| unknown [Populus trichocarpa]                          179   1e-42

>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  187 bits (476), Expect = 3e-45
 Identities = 96/147 (65%), Positives = 110/147 (74%)
 Frame = -2

Query: 837 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPEI 658
           M F SF GRVLFASVFILSAWQEFND+GVDGGPAAK+  PKF+V + HV+S  G QVP +
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 657 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 478
           EIK LVAAAIA+K             GAYLLLLHQA++TPI+YDFYNYD + KE      
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 477 XXXQGMALFGALLFFIGMKNSIPKRQV 397
              Q +ALFGALLFFIGMKNSIP+RQ+
Sbjct: 121 KFTQNLALFGALLFFIGMKNSIPRRQL 147


>ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]
          Length = 230

 Score =  183 bits (464), Expect = 7e-44
 Identities = 92/148 (62%), Positives = 113/148 (76%)
 Frame = -2

Query: 840 TMGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPE 661
           +M F SF GRVLFASVFILSAWQEFN++GVDGGPA ++L PK DV + HV++ +G+QVPE
Sbjct: 73  SMAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPE 132

Query: 660 IEIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXX 481
           +EIK LVAA+IALK             GA+LLLLHQAI+ PI+YDFYNYD++ KE     
Sbjct: 133 VEIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLF 192

Query: 480 XXXXQGMALFGALLFFIGMKNSIPKRQV 397
               Q +ALFGALLFFIGMKNS+P+RQ+
Sbjct: 193 LKFTQNLALFGALLFFIGMKNSMPRRQL 220


>emb|CBI23587.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  182 bits (463), Expect = 9e-44
 Identities = 92/147 (62%), Positives = 112/147 (76%)
 Frame = -2

Query: 837 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPEI 658
           M F SF GRVLFASVFILSAWQEFN++GVDGGPA ++L PK DV + HV++ +G+QVPE+
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 657 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 478
           EIK LVAA+IALK             GA+LLLLHQAI+ PI+YDFYNYD++ KE      
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 477 XXXQGMALFGALLFFIGMKNSIPKRQV 397
              Q +ALFGALLFFIGMKNS+P+RQ+
Sbjct: 121 KFTQNLALFGALLFFIGMKNSMPRRQL 147


>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  180 bits (456), Expect = 6e-43
 Identities = 95/146 (65%), Positives = 106/146 (72%)
 Frame = -2

Query: 837 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPEI 658
           M F SF GRVLFASVFILSA+QEFN++GVDGGPAAKAL+PKF V T HV S  G+QVPEI
Sbjct: 1   MAFTSFLGRVLFASVFILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 657 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 478
           EIK LV+AAI LK             GAYLL++HQ I  PI+YDFYNYD E KE      
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 477 XXXQGMALFGALLFFIGMKNSIPKRQ 400
              Q MAL+GALLFFIGMKNS P+RQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>gb|ABK92988.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  179 bits (454), Expect = 1e-42
 Identities = 93/147 (63%), Positives = 106/147 (72%)
 Frame = -2

Query: 837 MGFFSFAGRVLFASVFILSAWQEFNDYGVDGGPAAKALRPKFDVLTGHVTSQLGLQVPEI 658
           M F SF GRVLFASVFILSAWQEFN++G +GGPAA  L PKF V + HV+SQ G QVP  
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGTNGGPAAHLLEPKFHVFSKHVSSQTGFQVPHF 60

Query: 657 EIKQLVAAAIALKXXXXXXXXXXXXXGAYLLLLHQAIITPIVYDFYNYDLETKEXXXXXX 478
           E+K  VAAAI++K             GAYLLLLHQ IITPI+YDFYNYD +TKE      
Sbjct: 61  EMKHAVAAAISVKAFGSLLFIFGSSVGAYLLLLHQIIITPILYDFYNYDADTKEFNLLFA 120

Query: 477 XXXQGMALFGALLFFIGMKNSIPKRQV 397
              Q +ALFGALLFFIGMKNSIP+RQ+
Sbjct: 121 KFAQNLALFGALLFFIGMKNSIPRRQL 147


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