BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008867
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin...   651   0.0  
ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu...   634   e-179
ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi...   625   e-177
gb|AFK45229.1| unknown [Lotus japonicus]                              616   e-174
ref|XP_003630282.1| Histone deacetylase [Medicago truncatula] gi...   612   e-173

>ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
            gi|296088531|emb|CBI37522.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  651 bits (1679), Expect = 0.0
 Identities = 321/402 (79%), Positives = 359/402 (89%), Gaps = 1/402 (0%)
 Frame = +2

Query: 116  FRKHIRSEMKY-SQGIGPHIPSSSGVGKDPFLDSYETRLADARVLYCVAPALGHNQESHP 292
            FRKH++S  +Y S+  GP +  S        L    + L+DARV+YCVAPA+GHNQESHP
Sbjct: 44   FRKHLKSGRRYFSKSRGPFVSCS--------LVPSTSELSDARVIYCVAPAMGHNQESHP 95

Query: 293  ESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPASVDDITSVHSKSYVSGLEKAMDKA 472
            ESNFRVPAI+SALEKMEL+  FR SE++EL +F PASV+DI SVH+K+YVSGLEK+MD+A
Sbjct: 96   ESNFRVPAIVSALEKMELSPMFRGSEILELHSFSPASVEDIASVHTKAYVSGLEKSMDQA 155

Query: 473  SVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDSVVAASRIRQSPPLGFALIRPPGH 652
            S +G+I+I+GSGPTYAT TTFQESL+AAGAGI+LVDSVVAAS+  Q PP+GFALIRPPGH
Sbjct: 156  SQKGIIYIDGSGPTYATATTFQESLLAAGAGITLVDSVVAASKSSQDPPMGFALIRPPGH 215

Query: 653  HAIPKGPMGFCVFGNVAIAARHAQRAHGLKRVFIIDFDVHHGNGTCDTFYDDPDIFFLST 832
            HAIPKGPMGFCVFGNVAIAAR+AQR HGLKRVFIIDFDVHHGNGT D FYDDPDIFFLST
Sbjct: 216  HAIPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLST 275

Query: 833  HQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAMRSVFEEVIVPCAQRFKPDIILV 1012
            HQDGSYPGTGKIDEVGHG GEGATLNLPLPGGSGD AMR+VF+EVIVP AQRFKPDIILV
Sbjct: 276  HQDGSYPGTGKIDEVGHGSGEGATLNLPLPGGSGDIAMRTVFDEVIVPSAQRFKPDIILV 335

Query: 1013 SAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCGGRCVFFLEGGYNLESLSYSVAD 1192
            SAGYDGHVLDPLASLQFTT TYYMLASNIKQLA++LCGGRCVFFLEGGYNL SLSYSVAD
Sbjct: 336  SAGYDGHVLDPLASLQFTTGTYYMLASNIKQLAKDLCGGRCVFFLEGGYNLSSLSYSVAD 395

Query: 1193 SFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKYIHSL 1318
            SFRAFLGE S +S+FDDPAILYEEPS KVKQAIQ++K++HSL
Sbjct: 396  SFRAFLGEPSLASEFDDPAILYEEPSTKVKQAIQKVKHLHSL 437


>ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
            gi|223544531|gb|EEF46048.1| Histone deacetylase, putative
            [Ricinus communis]
          Length = 425

 Score =  634 bits (1634), Expect = e-179
 Identities = 311/404 (76%), Positives = 356/404 (88%), Gaps = 1/404 (0%)
 Frame = +2

Query: 110  RSFRKHIRSEMKY-SQGIGPHIPSSSGVGKDPFLDSYETRLADARVLYCVAPALGHNQES 286
            R F +H+ S   + ++ I   I  S+   KDP L S + +L DAR++Y VAPA+GHNQES
Sbjct: 23   RHFSQHVMSSRDHCNRSIRACICCSNSFEKDPNLPSIQ-QLTDARIIYSVAPAMGHNQES 81

Query: 287  HPESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPASVDDITSVHSKSYVSGLEKAMD 466
            HPES+ RVPAI++ALEKMEL+ KFR  E++ELQ+FKPAS  DI SVH+K+YV+GLEKAMD
Sbjct: 82   HPESHLRVPAIVTALEKMELSAKFRGPEIIELQHFKPASAIDIASVHAKAYVAGLEKAMD 141

Query: 467  KASVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDSVVAASRIRQSPPLGFALIRPP 646
            +AS EG+IFI+G+GPTYAT TTFQESL+AAGAG++LVDSVVAAS   Q+PP GFALIRPP
Sbjct: 142  QASQEGIIFIDGTGPTYATATTFQESLMAAGAGLALVDSVVAASNNSQNPPTGFALIRPP 201

Query: 647  GHHAIPKGPMGFCVFGNVAIAARHAQRAHGLKRVFIIDFDVHHGNGTCDTFYDDPDIFFL 826
            GHHAIPKGPMGFCVFGNVAIAARHAQR HGLKRVFIIDFDVHHGNGT D FYDDPDIFFL
Sbjct: 202  GHHAIPKGPMGFCVFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFL 261

Query: 827  STHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSAMRSVFEEVIVPCAQRFKPDII 1006
            STHQDGSYPGTGKIDEVG G GEG TLNLPLPGGSGD AMR+VF+EVIVPCAQRFKPDII
Sbjct: 262  STHQDGSYPGTGKIDEVGQGDGEGTTLNLPLPGGSGDVAMRTVFDEVIVPCAQRFKPDII 321

Query: 1007 LVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELCGGRCVFFLEGGYNLESLSYSV 1186
            LVSAGYDGHVLDPLASLQFTT T+YMLASNI QLA+++CGGRC+FFLEGGYNL+SLSYSV
Sbjct: 322  LVSAGYDGHVLDPLASLQFTTGTFYMLASNITQLAKDMCGGRCIFFLEGGYNLDSLSYSV 381

Query: 1187 ADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIKYIHSL 1318
            ADSFRAFLGE S +S+FD+PAILYEEP  +VKQAIQ++++IHSL
Sbjct: 382  ADSFRAFLGETSLASEFDNPAILYEEPLTRVKQAIQKVRHIHSL 425


>ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi|222856484|gb|EEE94031.1|
            histone deacetylase [Populus trichocarpa]
          Length = 390

 Score =  625 bits (1613), Expect = e-177
 Identities = 302/386 (78%), Positives = 346/386 (89%)
 Frame = +2

Query: 161  GPHIPSSSGVGKDPFLDSYETRLADARVLYCVAPALGHNQESHPESNFRVPAIMSALEKM 340
            G  I  S  + KDP ++    +L DARV+Y VAPA+GHNQE+HPES  RVPAI+SALEK 
Sbjct: 9    GFSISCSYSLDKDPLIE----KLTDARVIYSVAPAMGHNQEAHPESYLRVPAIVSALEKA 64

Query: 341  ELTTKFRSSEVVELQNFKPASVDDITSVHSKSYVSGLEKAMDKASVEGLIFIEGSGPTYA 520
            ELT+KFR SE++ELQ+FKPAS+DDI +VH+++YV+GLEKAMD+AS +G+I+I+GSGPTYA
Sbjct: 65   ELTSKFRGSEIIELQDFKPASLDDIANVHARAYVAGLEKAMDQASEQGIIYIDGSGPTYA 124

Query: 521  TETTFQESLIAAGAGISLVDSVVAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNV 700
            T TTF+ESL+AAGAG++LVDSVVAAS   Q+PP GFALIRPPGHHAIPKGPMGFCVFGNV
Sbjct: 125  TATTFRESLVAAGAGLTLVDSVVAASNCSQNPPTGFALIRPPGHHAIPKGPMGFCVFGNV 184

Query: 701  AIAARHAQRAHGLKRVFIIDFDVHHGNGTCDTFYDDPDIFFLSTHQDGSYPGTGKIDEVG 880
            AIAARHAQ  HGLKRVFIIDFDVHHGNGT D F+DDPDI+FLSTHQDGSYPGTGKIDE+G
Sbjct: 185  AIAARHAQLVHGLKRVFIIDFDVHHGNGTNDAFFDDPDIYFLSTHQDGSYPGTGKIDEIG 244

Query: 881  HGRGEGATLNLPLPGGSGDSAMRSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQ 1060
            HG GEG TLNLPLPGGSGD +MR+VF+EVIVP AQRFKPDIILVSAGYD HVLDPL SLQ
Sbjct: 245  HGDGEGTTLNLPLPGGSGDISMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLGSLQ 304

Query: 1061 FTTNTYYMLASNIKQLARELCGGRCVFFLEGGYNLESLSYSVADSFRAFLGERSSSSQFD 1240
            FTT TYY LASNIK+LA++LCGGRCVFFLEGGYNL+SLSYSV DSFRAFLGE+S +S+FD
Sbjct: 305  FTTGTYYTLASNIKELAKDLCGGRCVFFLEGGYNLDSLSYSVTDSFRAFLGEKSLASEFD 364

Query: 1241 DPAILYEEPSAKVKQAIQRIKYIHSL 1318
            +PAILYEEPS KVKQAIQR+K+IHSL
Sbjct: 365  NPAILYEEPSTKVKQAIQRVKHIHSL 390


>gb|AFK45229.1| unknown [Lotus japonicus]
          Length = 413

 Score =  616 bits (1588), Expect = e-174
 Identities = 292/365 (80%), Positives = 340/365 (93%)
 Frame = +2

Query: 224  RLADARVLYCVAPALGHNQESHPESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPAS 403
            +L+DARV+Y VAP++GHNQESHPES+FRVP+I++ALE+M+LT KFR SE++ELQ+F+PAS
Sbjct: 49   QLSDARVIYSVAPSMGHNQESHPESHFRVPSIVNALEEMKLTPKFRGSEIIELQHFEPAS 108

Query: 404  VDDITSVHSKSYVSGLEKAMDKASVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDS 583
            VDDI SVH+++YV GLEK MD+A  EGLI IEGSGPTYAT TTFQES++AAGAG++LVDS
Sbjct: 109  VDDIASVHARAYVFGLEKVMDQAMEEGLILIEGSGPTYATSTTFQESIVAAGAGLALVDS 168

Query: 584  VVAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQRAHGLKRVFIIDF 763
            VVAAS+I++ PP GFALIRPPGHHA+P+GPMGFCVFGNVAIAAR+AQR H LKRVFIIDF
Sbjct: 169  VVAASKIKRDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHALKRVFIIDF 228

Query: 764  DVHHGNGTCDTFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSA 943
            DVHHGNGT D FYDDPDIFFLS HQDGSYPGTGK DEVG G GEG TLNLPLPGGSGD+A
Sbjct: 229  DVHHGNGTNDAFYDDPDIFFLSFHQDGSYPGTGKFDEVGTGDGEGTTLNLPLPGGSGDTA 288

Query: 944  MRSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELC 1123
            +R+VF+EV+VPCAQRFKPDIILVSAGYDGHVLDPLA+LQFTT TYYMLAS+IKQLA++LC
Sbjct: 289  IRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLC 348

Query: 1124 GGRCVFFLEGGYNLESLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIK 1303
            GGRCVFFLEGGYNL+SLSYSVADSFRA +G++S +S+FD+P ILYEEP+AK+KQAIQRIK
Sbjct: 349  GGRCVFFLEGGYNLKSLSYSVADSFRALIGDQSLASEFDNPNILYEEPTAKIKQAIQRIK 408

Query: 1304 YIHSL 1318
            +IHSL
Sbjct: 409  HIHSL 413


>ref|XP_003630282.1| Histone deacetylase [Medicago truncatula] gi|355524304|gb|AET04758.1|
            Histone deacetylase [Medicago truncatula]
          Length = 420

 Score =  612 bits (1577), Expect = e-173
 Identities = 289/365 (79%), Positives = 337/365 (92%)
 Frame = +2

Query: 224  RLADARVLYCVAPALGHNQESHPESNFRVPAIMSALEKMELTTKFRSSEVVELQNFKPAS 403
            +L+ AR++Y VAP++GHNQESHPES+FRVPAI++AL++M+LT+KFR SEV+ELQNF+PAS
Sbjct: 56   QLSHARLIYSVAPSMGHNQESHPESHFRVPAIVTALQQMKLTSKFRGSEVIELQNFEPAS 115

Query: 404  VDDITSVHSKSYVSGLEKAMDKASVEGLIFIEGSGPTYATETTFQESLIAAGAGISLVDS 583
             DDI SVH+++YVSGLEK MD+A  +GLI ++GSGPTYAT TTFQES++AAGAG++LVDS
Sbjct: 116  TDDIASVHARAYVSGLEKVMDQALEKGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDS 175

Query: 584  VVAASRIRQSPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQRAHGLKRVFIIDF 763
            VVAAS+I + PP GFALIRPPGHHAIPKGPMGFC+FGNVAIAARHAQR HGLKRVFIIDF
Sbjct: 176  VVAASKIMKDPPTGFALIRPPGHHAIPKGPMGFCIFGNVAIAARHAQRVHGLKRVFIIDF 235

Query: 764  DVHHGNGTCDTFYDDPDIFFLSTHQDGSYPGTGKIDEVGHGRGEGATLNLPLPGGSGDSA 943
            DVHHGNGT D FYDDPD+FFLS HQDGSYPGTGK DEVG G GEG TLNLPLPGGSGD+A
Sbjct: 236  DVHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDTA 295

Query: 944  MRSVFEEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTNTYYMLASNIKQLARELC 1123
            +RSVF+EV+VPCAQRFKPDIILVSAGYDGHVLDPLA+LQ TT TYYMLAS+IKQLA++LC
Sbjct: 296  IRSVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQLTTGTYYMLASSIKQLAKDLC 355

Query: 1124 GGRCVFFLEGGYNLESLSYSVADSFRAFLGERSSSSQFDDPAILYEEPSAKVKQAIQRIK 1303
            GGRCVFFLEGGYNL+SLSYSVAD+FRA LG++S +S+FD+P ILYEEP+ K+KQAIQRIK
Sbjct: 356  GGRCVFFLEGGYNLKSLSYSVADTFRALLGDKSLASEFDNPNILYEEPTKKIKQAIQRIK 415

Query: 1304 YIHSL 1318
             +HSL
Sbjct: 416  CVHSL 420