BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008860
         (1490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   491   e-136
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   475   e-131
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   472   e-130
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi...   442   e-121

>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  516 bits (1329), Expect = e-144
 Identities = 253/436 (58%), Positives = 339/436 (77%), Gaps = 1/436 (0%)
 Frame = +1

Query: 16   EQVERVLSVLQSSLDRPLVAILNKLHVTINEEFMVRVIERPLVPGDSLIRFYNWGLKKYK 195
            E++E VL +LQSS D  L + L+   + ++EEF+V+V+E P V G++LIRF+ W +KK  
Sbjct: 30   EKLENVLHLLQSSDDGSLESTLDTFSLDLHEEFVVKVLETPHVLGENLIRFFKWAMKKQD 89

Query: 196  LKTSTRIVDSLVRAFGTGN-RKKDVYALWDLVTEIGENDVGVLSTGILNEVISLFWKLGQ 372
            L  +TR +D LV +  +   R+K+ YALWDLV EIGE + G++S G LN++I+L  KLG+
Sbjct: 90   LSVTTRAIDVLVSSICSSELRRKNAYALWDLVREIGEKNEGLVSVGSLNQLIALLSKLGK 149

Query: 373  GETALEVLNKFEDFVCEPNPDSYYLTIEALCCCSIYNWAWRVCKKMLNAGDLPDSKKIGS 552
            G+ ALEV +K +DF C P+ ++YY TIEALC  S Y+WAW VC+KML+ G LPDS+KIG 
Sbjct: 150  GKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKIGK 209

Query: 553  IISSFCKGNKAKDAHLVYLMAKKKNKCPPQTVVNLLICSLCKEDDTVKLALELLNDFSGD 732
            II  FCKG+KAKDAH VYL+AK+K+KCPP+  +  LI SLC++D TV LALE+LNDF G+
Sbjct: 210  IICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLALEMLNDFEGE 269

Query: 733  AHKYAMKPFSCVIGGLCRMKDTEEAKKVLSKMIDEGPPPDSAVFNSIINGLLKAGDLDEA 912
            A KYA+KPFS VI GLCR+KD + AK++LSKMI EGPPP +AVFN++I+G  K GD+ EA
Sbjct: 270  AKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEA 329

Query: 913  MGLLKVMESRGLIPNVATYSVLLSGYVKGGQMDEARSLLSEAKKKHAKLCPVTFHILARG 1092
            + ++K+MESRGL P+V TY+V++SGY  GGQM+EA  +LSEAKKKH+KL PVT+H L RG
Sbjct: 330  IEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRG 389

Query: 1093 YCELEEFDKAVELLIEMKDYGVYPNAEEYNKMIQSLCTPKGLDWRTADKLFEDMEEKGLY 1272
            YC+L++FDKA+ELL EM+ +GV PNA+EYNK+IQSLC  K LDW TA+KLF +M+EKGLY
Sbjct: 390  YCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSLCL-KSLDWGTAEKLFAEMKEKGLY 448

Query: 1273 LTPMTKLVVNTIKRWE 1320
            L  +T+ ++  +K  E
Sbjct: 449  LNSITRSLITAVKELE 464


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  491 bits (1264), Expect = e-136
 Identities = 246/444 (55%), Positives = 335/444 (75%)
 Frame = +1

Query: 16   EQVERVLSVLQSSLDRPLVAILNKLHVTINEEFMVRVIERPLVPGDSLIRFYNWGLKKYK 195
            +++E VLS+LQSS D  L + L+ + + ++E+F+V+V+E PL+ GD+LI+F+NW +K+  
Sbjct: 139  DKLENVLSLLQSSTDASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQPD 198

Query: 196  LKTSTRIVDSLVRAFGTGNRKKDVYALWDLVTEIGENDVGVLSTGILNEVISLFWKLGQG 375
            +  +TR+V  LVRA  +  RKKD YALWDLV +IGE +  VL+  +LN++I+LF KLG+G
Sbjct: 199  INVTTRLVHPLVRAICSELRKKDAYALWDLVKDIGEEENTVLNVDLLNQLIALFSKLGKG 258

Query: 376  ETALEVLNKFEDFVCEPNPDSYYLTIEALCCCSIYNWAWRVCKKMLNAGDLPDSKKIGSI 555
            + A EV NKF DF C P+ ++Y+ TIEALC  SI++WA  V +KML A  LPD++KIG I
Sbjct: 259  KAAFEVFNKFGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKIGKI 318

Query: 556  ISSFCKGNKAKDAHLVYLMAKKKNKCPPQTVVNLLICSLCKEDDTVKLALELLNDFSGDA 735
            I  FCKG+KA DA+LVYL+AK+KNK PPQ  VN LI  LC++++TVKLALE+L+ FSG  
Sbjct: 319  ICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQKNETVKLALEMLDAFSGPK 378

Query: 736  HKYAMKPFSCVIGGLCRMKDTEEAKKVLSKMIDEGPPPDSAVFNSIINGLLKAGDLDEAM 915
             KYA+KPFS VI  LCR+KD + AK +LSKM+DEGPPP +AVFNSIING  K GD+ EA+
Sbjct: 379  RKYAIKPFSSVIRALCRIKDLDGAKMLLSKMVDEGPPPGNAVFNSIINGYSKCGDMKEAI 438

Query: 916  GLLKVMESRGLIPNVATYSVLLSGYVKGGQMDEARSLLSEAKKKHAKLCPVTFHILARGY 1095
             + ++M  RGL P++ TY+V++SGY  GGQM+EA  +LSEAKKKH+KL PV +H + RGY
Sbjct: 439  KMKQLMVRRGLKPDLFTYAVIMSGYASGGQMEEACKVLSEAKKKHSKLSPVMYHTVIRGY 498

Query: 1096 CELEEFDKAVELLIEMKDYGVYPNAEEYNKMIQSLCTPKGLDWRTADKLFEDMEEKGLYL 1275
            C+LE+FDKA++LL EMK +GV  NA+EYNK+IQSLC  K LDW  A+KL E M+E GL+L
Sbjct: 499  CKLEQFDKALDLLAEMKTFGVQANADEYNKLIQSLCL-KALDWERAEKLLEKMKEDGLHL 557

Query: 1276 TPMTKLVVNTIKRWENPKIWIERG 1347
              +T+ ++  +K  E+  I  E G
Sbjct: 558  NGITRGLIRAVKELEDEGIEKEVG 581


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  475 bits (1222), Expect = e-131
 Identities = 239/437 (54%), Positives = 323/437 (73%), Gaps = 2/437 (0%)
 Frame = +1

Query: 16   EQVERVLSVLQSSLDR--PLVAILNKLHVTINEEFMVRVIERPLVPGDSLIRFYNWGLKK 189
            +++E VLS+LQSS D    L +  N + +++NEEF+VRV+E P VP ++LI F+ W  K 
Sbjct: 118  DKLESVLSLLQSSGDAVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSWKN 177

Query: 190  YKLKTSTRIVDSLVRAFGTGNRKKDVYALWDLVTEIGENDVGVLSTGILNEVISLFWKLG 369
                 +TR VD+LVRA     R+KD Y+LWDLV EIGE + GVL+ GILNE+I+ F KLG
Sbjct: 178  PGFSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKEIGEKENGVLNVGILNELIAQFAKLG 237

Query: 370  QGETALEVLNKFEDFVCEPNPDSYYLTIEALCCCSIYNWAWRVCKKMLNAGDLPDSKKIG 549
            +G+  LEV N F ++                   SI++WA  VC+KMLNA  LPDS+K+ 
Sbjct: 238  KGKAGLEVFNAFGEYGR-----------------SIFDWALSVCEKMLNASSLPDSEKVW 280

Query: 550  SIISSFCKGNKAKDAHLVYLMAKKKNKCPPQTVVNLLICSLCKEDDTVKLALELLNDFSG 729
            +IIS FCKG K KDA+LVYL+AK+KNK PP+T VN LI SLC+ED T+ +A+E+L+DFSG
Sbjct: 281  NIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFSG 340

Query: 730  DAHKYAMKPFSCVIGGLCRMKDTEEAKKVLSKMIDEGPPPDSAVFNSIINGLLKAGDLDE 909
            +  KYA+KP++ VI GLCR KD + AK++L KMI+ GPPP +AVFN +INGL KAG+++E
Sbjct: 341  EECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEMEE 400

Query: 910  AMGLLKVMESRGLIPNVATYSVLLSGYVKGGQMDEARSLLSEAKKKHAKLCPVTFHILAR 1089
            AM ++K+ME+RGL P+V TYSV++SGY  GG M+EA  +LSEAK+ H+KL PVT+H L R
Sbjct: 401  AMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVTYHTLIR 460

Query: 1090 GYCELEEFDKAVELLIEMKDYGVYPNAEEYNKMIQSLCTPKGLDWRTADKLFEDMEEKGL 1269
            GYC+LE+FDKAVELL EMK++GV PN +EYNK+IQSLC  K LDW+TA+KL E+M++ GL
Sbjct: 461  GYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCL-KALDWQTAEKLLEEMKQNGL 519

Query: 1270 YLTPMTKLVVNTIKRWE 1320
            +L  +T+ ++  +K  E
Sbjct: 520  HLNGITRGLIRAVKELE 536


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
            gi|449477884|ref|XP_004155152.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  472 bits (1215), Expect = e-130
 Identities = 229/443 (51%), Positives = 331/443 (74%), Gaps = 1/443 (0%)
 Frame = +1

Query: 16   EQVERVLSVLQSSLDRPLVAILNKLHVTINEEFMVRVIERPLVPGDSLIRFYNWGLKKY- 192
            EQ+E VLS++QS++D    + L+++ +T+NE+F+++VIE P + G++LIRF+ W +  + 
Sbjct: 32   EQLESVLSLIQSTVDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAVNSHP 91

Query: 193  KLKTSTRIVDSLVRAFGTGNRKKDVYALWDLVTEIGENDVGVLSTGILNEVISLFWKLGQ 372
            + + ST +VD LVR      R++  Y+LW+L+ EIG     +L+  ILN++I+ F KLG+
Sbjct: 92   EFEVSTPVVDVLVRVVCANLRQRVAYSLWELIKEIGGKQTSLLNAEILNQLIAFFSKLGK 151

Query: 373  GETALEVLNKFEDFVCEPNPDSYYLTIEALCCCSIYNWAWRVCKKMLNAGDLPDSKKIGS 552
            G+ ALEVLN +E   C PN +SYY T+EALC  S Y+ AW VC+KML++G +P+S ++G 
Sbjct: 152  GKAALEVLNSYEVLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPESNRVGK 211

Query: 553  IISSFCKGNKAKDAHLVYLMAKKKNKCPPQTVVNLLICSLCKEDDTVKLALELLNDFSGD 732
            IIS FCKGNKAK+AH VYL+AK+K+   PQ  +N+LI SLC++D+TVKLALE+LNDFS  
Sbjct: 212  IISLFCKGNKAKNAHSVYLLAKEKHVNLPQCYMNILIHSLCRDDETVKLALEMLNDFSTG 271

Query: 733  AHKYAMKPFSCVIGGLCRMKDTEEAKKVLSKMIDEGPPPDSAVFNSIINGLLKAGDLDEA 912
              + A+KP+  VI  LCR+KDT +AK +L KMI EGPPP +A FN++I G  KAGDL+EA
Sbjct: 272  ERRRAIKPYMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPGNAAFNAVICGYSKAGDLEEA 331

Query: 913  MGLLKVMESRGLIPNVATYSVLLSGYVKGGQMDEARSLLSEAKKKHAKLCPVTFHILARG 1092
            M L+K+MESRGL P+V +Y+ ++SGY KGGQM EA  +L EAKKKHAKL  +T+H L R 
Sbjct: 332  MELIKLMESRGLKPDVYSYTAVISGYAKGGQMKEAYEVLDEAKKKHAKLSHITYHTLIRN 391

Query: 1093 YCELEEFDKAVELLIEMKDYGVYPNAEEYNKMIQSLCTPKGLDWRTADKLFEDMEEKGLY 1272
            +C+LEE+D A++LL EMK++GV PN +EYNK+I+SLC  K +DWRT+++LFE+M+E GL+
Sbjct: 392  HCKLEEYDSALKLLSEMKNFGVQPNVDEYNKLIRSLCL-KAVDWRTSERLFEEMKENGLH 450

Query: 1273 LTPMTKLVVNTIKRWENPKIWIE 1341
            L  +T+ ++  ++  E  ++  E
Sbjct: 451  LNGITRGLIRAVRELEEEELTTE 473


>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like isoform 1 [Glycine max]
            gi|356556346|ref|XP_003546487.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like isoform 2 [Glycine max]
          Length = 538

 Score =  442 bits (1136), Expect = e-121
 Identities = 218/437 (49%), Positives = 318/437 (72%), Gaps = 2/437 (0%)
 Frame = +1

Query: 16   EQVERVLSVLQSSLDRPLVAILNKLHVTINEEFMVRVIERPLVPGDSLIRFYNWGLKKYK 195
            +++E VL +LQ+S D  L + L+ + +T++++ + ++ E P V  ++LIRF+ W   +  
Sbjct: 90   DKLESVLRLLQTSADGSLESCLDDIDLTLHQQLVTKITETPFVLSENLIRFFWWAWSERS 149

Query: 196  LKTSTRIVDSLVRAF-GTGNRKKDV-YALWDLVTEIGENDVGVLSTGILNEVISLFWKLG 369
            L  +T +V+SLV A  G   RKK+V Y+LWDLV EIGE + G+L+  ILNE+IS F +LG
Sbjct: 150  LGVTTPMVESLVLAICGNDVRKKEVVYSLWDLVKEIGEKESGILNVKILNELISSFLRLG 209

Query: 370  QGETALEVLNKFEDFVCEPNPDSYYLTIEALCCCSIYNWAWRVCKKMLNAGDLPDSKKIG 549
            +G+ ALEV NKFE F C P+ D+YY TIEALC     +WA  VC+KM++A  LPD +K+G
Sbjct: 210  KGKAALEVFNKFEAFHCVPDADTYYFTIEALCRRRALDWACGVCQKMVDAQILPDGEKVG 269

Query: 550  SIISSFCKGNKAKDAHLVYLMAKKKNKCPPQTVVNLLICSLCKEDDTVKLALELLNDFSG 729
            +I+S  CKG KAK+AH VY++A +K K PP  VV+ L+  LC ED+TVK ALE+L D   
Sbjct: 270  AILSWLCKGKKAKEAHGVYVVATEKGKQPPVNVVSFLVVKLCGEDETVKFALEMLEDIPE 329

Query: 730  DAHKYAMKPFSCVIGGLCRMKDTEEAKKVLSKMIDEGPPPDSAVFNSIINGLLKAGDLDE 909
            +  + A+KPF  V+  LCR+K+ ++AK+++ KMI++GPPP +AVFN ++    KAG++ +
Sbjct: 330  EKRERAIKPFLAVVRALCRIKEVDKAKELVLKMIEDGPPPGNAVFNFVVTAYSKAGEMGK 389

Query: 910  AMGLLKVMESRGLIPNVATYSVLLSGYVKGGQMDEARSLLSEAKKKHAKLCPVTFHILAR 1089
            A+ ++++MESRGL P+V TY+VL S Y  GG+M+EA+ +L+E KKKHAKL PV FH L R
Sbjct: 390  AVEMMRLMESRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEVKKKHAKLGPVMFHTLIR 449

Query: 1090 GYCELEEFDKAVELLIEMKDYGVYPNAEEYNKMIQSLCTPKGLDWRTADKLFEDMEEKGL 1269
            GYC+LE+FD+A++LL EMKDYGV+P+ +EY+K+IQSLC  K LDW  A+KL E+M+E GL
Sbjct: 450  GYCKLEQFDEALKLLAEMKDYGVHPSVDEYDKLIQSLCL-KALDWEMAEKLHEEMKESGL 508

Query: 1270 YLTPMTKLVVNTIKRWE 1320
            +L  +T+ ++  +K  E
Sbjct: 509  HLKGITRGLIRAVKEME 525