BLASTX nr result

ID: Coptis23_contig00008857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008857
         (1693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275222.2| PREDICTED: farnesylcysteine lyase-like [Viti...   566   e-159
ref|XP_002516333.1| conserved hypothetical protein [Ricinus comm...   547   e-153
ref|XP_003526874.1| PREDICTED: farnesylcysteine lyase-like [Glyc...   543   e-152
ref|XP_002866583.1| hypothetical protein ARALYDRAFT_496583 [Arab...   530   e-148
ref|XP_003602655.1| CCP [Medicago truncatula] gi|355491703|gb|AE...   525   e-146

>ref|XP_002275222.2| PREDICTED: farnesylcysteine lyase-like [Vitis vinifera]
            gi|296082596|emb|CBI21601.3| unnamed protein product
            [Vitis vinifera]
          Length = 502

 Score =  566 bits (1459), Expect = e-159
 Identities = 286/435 (65%), Positives = 336/435 (77%)
 Frame = -3

Query: 1307 PNTCIIGSGIAGSSLAHFLRVYSSSTPQVNFQTIQIFEKNDIVGGRMATVSIGGDTFEAG 1128
            P  CI+G GI+GSS+AHFLR YS  T      T++IFE++ +VGGRMATV + G+TFEAG
Sbjct: 38   PIFCIVGGGISGSSVAHFLRRYSPHTAL----TLRIFERSGVVGGRMATVVLAGETFEAG 93

Query: 1127 ASILHPRNLHVLNFTKLFNLRAKTSDEDDDMGSLGIWDGSKFLFKTIDVKSGSSWYRKFV 948
            ASILHP+N H +NFTK+ NL  KT    +   SLGIWDG KF+FKT+D  S SS  ++ V
Sbjct: 94   ASILHPKNFHAVNFTKMLNLSVKTPPSSESSLSLGIWDGEKFVFKTLDSNSKSSIVQRIV 153

Query: 947  SVFNSLRLLGRYGFSLFRMERFVKSAVDNFCKYYESFESRPVFESVEEMLKWAGXXXXXX 768
            ++ NS+ L  RYGFSL +M+ FV++ VDNF KYY SFESRPVFE+V+EMLKWA       
Sbjct: 154  AITNSVLLFVRYGFSLLKMDSFVQTTVDNFLKYYASFESRPVFETVDEMLKWADLYNLTA 213

Query: 767  XXXXXXLVDAGLSPLLISELVTVITRVNYGQSVSMXXXXXXXXXXXXXXXLWAVEGGNWQ 588
                  LV+AGLSPLLI ELVTVITR+NYGQSVS+               LW+VE GNWQ
Sbjct: 214  RTLQDELVEAGLSPLLIEELVTVITRINYGQSVSISGLAGAVSLAGSGGGLWSVERGNWQ 273

Query: 587  VDAGLIKHSDVKLHLGEHIESVSYLGGRYELNSTKGNSYICDVTVVATPLDEVNIRFSPP 408
            + AGLI HSDV LH  E IES+SY G  YELNSTKGNSY C+V V+ATPLDE+NI F+PP
Sbjct: 274  IVAGLINHSDVVLHRNEEIESISYHGEYYELNSTKGNSYKCEVAVIATPLDELNIHFNPP 333

Query: 407  ISIPDRNLQHTYTTFVRGLLNPAYFSLNSLSEIPELVGTVEDPDIPFSCISVLKKYSEED 228
            ISIP R LQHT+ TFVRGLLNPAYF L ++SEIPELVGT+EDP++PFS ISVL+K+ E+D
Sbjct: 334  ISIPKRKLQHTHATFVRGLLNPAYFGLVAVSEIPELVGTLEDPNLPFSSISVLRKHDEKD 393

Query: 227  MTYKMFSRAQMEDSLLDQIFSARKETIRINWGAYPHYKAPEVFAPFLLDGLHLYYVNAFE 48
            M+YK+FSR  M D LLD+IFS RKETIRINWGAYPHY APEVFAPF+LDG HLYYVNAFE
Sbjct: 394  MSYKIFSRKPMADVLLDRIFSLRKETIRINWGAYPHYSAPEVFAPFVLDGRHLYYVNAFE 453

Query: 47   NAASTMETSAVAAEN 3
            NAASTMETSAVAAEN
Sbjct: 454  NAASTMETSAVAAEN 468


>ref|XP_002516333.1| conserved hypothetical protein [Ricinus communis]
            gi|223544563|gb|EEF46080.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 495

 Score =  547 bits (1410), Expect = e-153
 Identities = 279/435 (64%), Positives = 328/435 (75%)
 Frame = -3

Query: 1307 PNTCIIGSGIAGSSLAHFLRVYSSSTPQVNFQTIQIFEKNDIVGGRMATVSIGGDTFEAG 1128
            PN CIIGSGIAGSSLAHFLR YS      +   I +FE+N +VGGRMATV+I G+TFEAG
Sbjct: 28   PNICIIGSGIAGSSLAHFLRRYSPPDSPSSAARILVFERNGLVGGRMATVTISGETFEAG 87

Query: 1127 ASILHPRNLHVLNFTKLFNLRAKTSDEDDDMGSLGIWDGSKFLFKTIDVKSGSSWYRKFV 948
            ASILHP+N H  NFT+L NL+ K     +   SLGIWDG KF+FKTI  +S   + +K +
Sbjct: 88   ASILHPKNYHASNFTRLLNLKRKAPSSSESSISLGIWDGKKFVFKTISCESKIPFVQKIL 147

Query: 947  SVFNSLRLLGRYGFSLFRMERFVKSAVDNFCKYYESFESRPVFESVEEMLKWAGXXXXXX 768
            S  N   +  RYGFSLF+M  FV+  V+NF KYYESF +RP+FE+V+EMLKWAG      
Sbjct: 148  SFANDFYMFLRYGFSLFKMSSFVEDTVNNFLKYYESFGTRPIFETVDEMLKWAGLYDLTT 207

Query: 767  XXXXXXLVDAGLSPLLISELVTVITRVNYGQSVSMXXXXXXXXXXXXXXXLWAVEGGNWQ 588
                  LV+ GLS LLI ELVTVITR+NYGQSV +               LWA+EGGNWQ
Sbjct: 208  RTLQDELVNVGLSTLLIQELVTVITRINYGQSVYISGLAGAVSLAGSGGGLWAIEGGNWQ 267

Query: 587  VDAGLIKHSDVKLHLGEHIESVSYLGGRYELNSTKGNSYICDVTVVATPLDEVNIRFSPP 408
            +  GLI  S+V+LHL E I S+SYLG  YELNSTKG SY C+V VVATPLDE NI+FSPP
Sbjct: 268  MVGGLINSSNVELHLYEEIHSISYLGEYYELNSTKG-SYPCEVAVVATPLDESNIQFSPP 326

Query: 407  ISIPDRNLQHTYTTFVRGLLNPAYFSLNSLSEIPELVGTVEDPDIPFSCISVLKKYSEED 228
            ISIP R LQHT+ TFVRGLL+P YF L ++SEIPELVGT+EDP++PFS IS+LK++++ D
Sbjct: 327  ISIPKRQLQHTHATFVRGLLSPEYFGLKAVSEIPELVGTLEDPELPFSSISILKQHNQTD 386

Query: 227  MTYKMFSRAQMEDSLLDQIFSARKETIRINWGAYPHYKAPEVFAPFLLDGLHLYYVNAFE 48
            MTYK+FSR  M DSLLD IFS R+ETIRINWGAYP YKAPEVFAPF+LDG +LYYVNAFE
Sbjct: 387  MTYKIFSRKAMSDSLLDSIFSGREETIRINWGAYPQYKAPEVFAPFILDGHNLYYVNAFE 446

Query: 47   NAASTMETSAVAAEN 3
            NAASTMETSAVAAEN
Sbjct: 447  NAASTMETSAVAAEN 461


>ref|XP_003526874.1| PREDICTED: farnesylcysteine lyase-like [Glycine max]
          Length = 507

 Score =  543 bits (1399), Expect = e-152
 Identities = 276/445 (62%), Positives = 335/445 (75%), Gaps = 11/445 (2%)
 Frame = -3

Query: 1304 NTCIIGSGIAGSSLAHFLRVYS-SSTPQVNFQTIQIFEKNDIVGGRMATVSIGGDTFEAG 1128
            N C+IG+GI GSS+AHFLR YS SSTP      I++FE+N  VGGR+ATV++ G+TFEAG
Sbjct: 33   NVCVIGAGIGGSSVAHFLRKYSPSSTPSTK---IRVFERNGRVGGRIATVTVAGETFEAG 89

Query: 1127 ASILHPRNLHVLNFTKLFNLRAKTSDEDDDMGSLGIWDGSKFLFKTIDVKSGS------- 969
            ASILHP+NLH +++ K+  L+ K     +D  SLGIWDG+KF+FKT+   S +       
Sbjct: 90   ASILHPKNLHTVDYVKILKLKVKEPTASEDSLSLGIWDGNKFVFKTVSPLSSTVPLIDKL 149

Query: 968  ---SWYRKFVSVFNSLRLLGRYGFSLFRMERFVKSAVDNFCKYYESFESRPVFESVEEML 798
                +    VS  NS  +  RYGFSLF+M+ FV+ AVD F KYYE   SRP+FE+V+EML
Sbjct: 150  LKLPFVNTLVSFVNSALMFVRYGFSLFKMQNFVEIAVDKFVKYYEDPGSRPIFETVDEML 209

Query: 797  KWAGXXXXXXXXXXXXLVDAGLSPLLISELVTVITRVNYGQSVSMXXXXXXXXXXXXXXX 618
            +WAG            LVDAGLS  LI+ELVTVITR+NYGQSVSM               
Sbjct: 210  QWAGLYNLTTRTLRDELVDAGLSTSLINELVTVITRINYGQSVSMSGLGGVVSLAGSGGG 269

Query: 617  LWAVEGGNWQVDAGLIKHSDVKLHLGEHIESVSYLGGRYELNSTKGNSYICDVTVVATPL 438
            LW++EGGNWQ+ AGLI  SDV LHL E I+SV+ LG  YELNSTKGNSY C+V VVATPL
Sbjct: 270  LWSIEGGNWQMAAGLINQSDVALHLHEEIKSVADLGDYYELNSTKGNSYRCEVAVVATPL 329

Query: 437  DEVNIRFSPPISIPDRNLQHTYTTFVRGLLNPAYFSLNSLSEIPELVGTVEDPDIPFSCI 258
            DE++I+F PPISIP+R LQHT+TTFVRGLLNPAYF L ++++IP+LVGT+EDP++PFSCI
Sbjct: 330  DELDIQFIPPISIPERKLQHTFTTFVRGLLNPAYFGLKAVTKIPDLVGTIEDPELPFSCI 389

Query: 257  SVLKKYSEEDMTYKMFSRAQMEDSLLDQIFSARKETIRINWGAYPHYKAPEVFAPFLLDG 78
            +VLKK++E++ TYK+FSR  M D+LLD IFS RKETIRINW AYPHY APEVFAPF+LDG
Sbjct: 390  AVLKKHNEKESTYKLFSRQPMADTLLDSIFSVRKETIRINWAAYPHYHAPEVFAPFILDG 449

Query: 77   LHLYYVNAFENAASTMETSAVAAEN 3
             HLYYVNAFENAASTMETSAVAAEN
Sbjct: 450  RHLYYVNAFENAASTMETSAVAAEN 474


>ref|XP_002866583.1| hypothetical protein ARALYDRAFT_496583 [Arabidopsis lyrata subsp.
            lyrata] gi|297312418|gb|EFH42842.1| hypothetical protein
            ARALYDRAFT_496583 [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  530 bits (1366), Expect = e-148
 Identities = 267/435 (61%), Positives = 322/435 (74%)
 Frame = -3

Query: 1307 PNTCIIGSGIAGSSLAHFLRVYSSSTPQVNFQTIQIFEKNDIVGGRMATVSIGGDTFEAG 1128
            P  CI+GSGI GSS+AHFLR YS ST  +N   I +FE+++IVGGRM TV++ GDTFEAG
Sbjct: 36   PTVCIVGSGIGGSSVAHFLRNYSVSTG-LNRAKILMFERHEIVGGRMRTVTVAGDTFEAG 94

Query: 1127 ASILHPRNLHVLNFTKLFNLRAKTSDEDDDMGSLGIWDGSKFLFKTIDVKSGSSWYRKFV 948
             SILHP+N HV +F + FNL  +     ++  ++GIWDG KF+ KT    +   +    V
Sbjct: 95   GSILHPKNYHVKDFVERFNLTVRLPTPIEESSAIGIWDGKKFVVKTFGSGTKFPFLDTIV 154

Query: 947  SVFNSLRLLGRYGFSLFRMERFVKSAVDNFCKYYESFESRPVFESVEEMLKWAGXXXXXX 768
            S  N L L  RYGFSL RM  F+++ VDNF KYYES ESRP+F++VE MLKW+G      
Sbjct: 155  SWVNDLYLFLRYGFSLLRMSSFIENTVDNFLKYYESLESRPIFDNVEGMLKWSGLYNLTK 214

Query: 767  XXXXXXLVDAGLSPLLISELVTVITRVNYGQSVSMXXXXXXXXXXXXXXXLWAVEGGNWQ 588
                  L +A LSPLL++ELVTVITR+NYGQSV +               LW+VEGGNWQ
Sbjct: 215  LTLQEKLSEAQLSPLLVNELVTVITRINYGQSVLISGLAGAVSLAGSGGGLWSVEGGNWQ 274

Query: 587  VDAGLIKHSDVKLHLGEHIESVSYLGGRYELNSTKGNSYICDVTVVATPLDEVNIRFSPP 408
            + A LI HSD+ LHL E IES+S+LG  YELNSTKGNSY CDVTVVATPLDEV+I+FSP 
Sbjct: 275  MAAKLINHSDITLHLNEKIESISHLGNHYELNSTKGNSYKCDVTVVATPLDEVDIQFSPA 334

Query: 407  ISIPDRNLQHTYTTFVRGLLNPAYFSLNSLSEIPELVGTVEDPDIPFSCISVLKKYSEED 228
            ISIP R LQHT+ TFVRGLLNP YF + SLS++P L+GT+EDP IPFSCIS+L+KYS+ D
Sbjct: 335  ISIPKRELQHTHATFVRGLLNPGYFGMKSLSDVPALLGTLEDPLIPFSCISILRKYSKTD 394

Query: 227  MTYKMFSRAQMEDSLLDQIFSARKETIRINWGAYPHYKAPEVFAPFLLDGLHLYYVNAFE 48
            MTYK+F+R    DSLLD++FS R ET+RI+WGAYP Y APEVFAPF+LD  HLYYVNAFE
Sbjct: 395  MTYKIFTRQPASDSLLDELFSRRTETVRIDWGAYPKYHAPEVFAPFILDDHHLYYVNAFE 454

Query: 47   NAASTMETSAVAAEN 3
            NAASTMETSAVA EN
Sbjct: 455  NAASTMETSAVAGEN 469


>ref|XP_003602655.1| CCP [Medicago truncatula] gi|355491703|gb|AES72906.1| CCP [Medicago
            truncatula]
          Length = 1114

 Score =  525 bits (1351), Expect = e-146
 Identities = 271/442 (61%), Positives = 332/442 (75%), Gaps = 10/442 (2%)
 Frame = -3

Query: 1298 CIIGSGIAGSSLAHFLRVYSSS-TPQVNFQTIQIFEKNDIVGGRMATVSIGGDTFEAGAS 1122
            CIIG+GI GSS+AHF+R YS   TP      I++FE+N IVGGR+ATV++ G+TFEAGAS
Sbjct: 646  CIIGAGIGGSSVAHFIRKYSPDLTPTTK---IRVFERNTIVGGRIATVNVAGETFEAGAS 702

Query: 1121 ILHPRNLHVLNFTKLFNLRAKTSDEDDDMGSLGIWDGSKFLFKTIDVKSGSSWYRKF--- 951
            ILHP+NLH +N+TKL NL+A+   E     SL IWDG+KF+FKTI++ S    + K    
Sbjct: 703  ILHPKNLHAVNYTKLLNLKAR---EPSSGFSLAIWDGNKFVFKTIEISSNLPLFDKLLKL 759

Query: 950  ------VSVFNSLRLLGRYGFSLFRMERFVKSAVDNFCKYYESFESRPVFESVEEMLKWA 789
                  VS+ NS  +  RYGFSLF+M+ FV+SAV +F KYYE   SRP+FE+V+EMLKWA
Sbjct: 760  PFIENLVSLVNSGLMFVRYGFSLFKMQNFVQSAVGSFSKYYEDTGSRPIFETVDEMLKWA 819

Query: 788  GXXXXXXXXXXXXLVDAGLSPLLISELVTVITRVNYGQSVSMXXXXXXXXXXXXXXXLWA 609
            G            LVDAGLSPLLI+ELVTVITR+NYGQSV M               LW+
Sbjct: 820  GLFNLTTRTLQDELVDAGLSPLLINELVTVITRINYGQSVYMSGLGGAVSLAGSGGGLWS 879

Query: 608  VEGGNWQVDAGLIKHSDVKLHLGEHIESVSYLGGRYELNSTKGNSYICDVTVVATPLDEV 429
            +EGGN Q+  GLI  SDV LHL E I+SV+ LG  YELNSTKGN+YIC+V VVATPLDE+
Sbjct: 880  IEGGNRQMAVGLIDRSDVALHLNEGIKSVADLGDHYELNSTKGNNYICEVAVVATPLDEI 939

Query: 428  NIRFSPPISIPDRNLQHTYTTFVRGLLNPAYFSLNSLSEIPELVGTVEDPDIPFSCISVL 249
            NI+F PPISIP+R LQHT+ TFVRGLLNP YF L + ++IP+LV T+EDP++PF+ ISVL
Sbjct: 940  NIQFIPPISIPERKLQHTHATFVRGLLNPVYFGLKATAKIPDLVATLEDPELPFTSISVL 999

Query: 248  KKYSEEDMTYKMFSRAQMEDSLLDQIFSARKETIRINWGAYPHYKAPEVFAPFLLDGLHL 69
            KK++EE+ TYK+FSR  M D+LL+ IFS RKETIRI+W AYP Y APE+FAPF+LDG +L
Sbjct: 1000 KKHNEEESTYKIFSRKPMADTLLNSIFSVRKETIRIDWAAYPQYHAPEIFAPFILDGRNL 1059

Query: 68   YYVNAFENAASTMETSAVAAEN 3
            YYVNAFENAASTMETSAV+AEN
Sbjct: 1060 YYVNAFENAASTMETSAVSAEN 1081


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