BLASTX nr result
ID: Coptis23_contig00008856
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008856
(2054 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517888.1| protein binding protein, putative [Ricinus c... 855 0.0
ref|XP_002274722.1| PREDICTED: uncharacterized RING finger prote... 843 0.0
gb|AEL99131.1| RING/U-box domain-containing protein, partial [Si... 836 0.0
gb|AEL99132.1| RING/U-box domain-containing protein, partial [Si... 832 0.0
ref|XP_003543332.1| PREDICTED: uncharacterized RING finger prote... 821 0.0
>ref|XP_002517888.1| protein binding protein, putative [Ricinus communis]
gi|223542870|gb|EEF44406.1| protein binding protein,
putative [Ricinus communis]
Length = 570
Score = 855 bits (2209), Expect = 0.0
Identities = 417/547 (76%), Positives = 463/547 (84%), Gaps = 2/547 (0%)
Frame = +3
Query: 162 LWACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDD-DVGPSAAWNITGTYRGTWNSQN 338
LW F F + + V VRPL+E ++SWGDEWLF K+D+ D+GP +AWNITGTYRG+W +
Sbjct: 28 LW--FGFVVLRPVAGVRPLKERARSWGDEWLFVKKDENDLGPFSAWNITGTYRGSWKFLD 85
Query: 339 SINGSLRFPDPGKFEGVAVFELASTPTKITGVHYVQGVIIFHDVLDH-HGAGVQSAQIRV 515
S N S RFPD K G ++ EL STPTKITGVHYVQG IIFHDV D+ H G AQIRV
Sbjct: 86 STNSSSRFPDFRKSNGDSIIELVSTPTKITGVHYVQGAIIFHDVFDNAHNVG--GAQIRV 143
Query: 516 EGVYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYS 695
EGVYIWPFRQLRMV NSGK+ +L QE+DYILSNPYHLLGVFSSQVFQESP +K WRRK S
Sbjct: 144 EGVYIWPFRQLRMVANSGKEAELSQEEDYILSNPYHLLGVFSSQVFQESPRDKLWRRKNS 203
Query: 696 PTYDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSV 875
P Y+MEKHCNIEIAAQ++R S Q DG +RY LEGLM+SP+ DD G+CFSP++LNATSV
Sbjct: 204 PIYEMEKHCNIEIAAQITRVSSIQNDGDRDRYHLEGLMQSPAVDDDGDCFSPLLLNATSV 263
Query: 876 NIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCL 1055
NIEVYYNKAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVS+ +IGQQAIMDAYLCL
Sbjct: 264 NIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSLLMIGQQAIMDAYLCL 323
Query: 1056 LHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPMINGEGWEAMRRELSV 1235
LHLTAGILVESL SIFEMRYLLAIWKA+RP+ +GEGWE MRRELSV
Sbjct: 324 LHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPINSGEGWETMRRELSV 383
Query: 1236 LYSRFYXXXXXXXXXMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTI 1415
LYSRFY MY+ HNFL+PIL +MYSFWIPQI+TNV+RDSRKPLHP+YI+GMTI
Sbjct: 384 LYSRFYGILLGGILVMYEFHNFLRPILFLMYSFWIPQIITNVIRDSRKPLHPHYILGMTI 443
Query: 1416 TRLAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEK 1595
TRLAIPLY+FGCPNNFMRIE DK+WC+CL VFMGLQASILLLQ+YLGSR FIPRQILPEK
Sbjct: 444 TRLAIPLYIFGCPNNFMRIEPDKSWCMCLSVFMGLQASILLLQHYLGSRWFIPRQILPEK 503
Query: 1596 YSYYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTC 1775
YSYYRRFDQDT+ ATDCVICMTAIDL+QRS DCMVTPCDHFFHSGCLQRWMDIKMECPTC
Sbjct: 504 YSYYRRFDQDTNHATDCVICMTAIDLTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTC 563
Query: 1776 RRPLPPA 1796
RR LPPA
Sbjct: 564 RRSLPPA 570
>ref|XP_002274722.1| PREDICTED: uncharacterized RING finger protein C947.10 [Vitis
vinifera] gi|302143312|emb|CBI21873.3| unnamed protein
product [Vitis vinifera]
Length = 570
Score = 843 bits (2177), Expect = 0.0
Identities = 407/551 (73%), Positives = 461/551 (83%), Gaps = 1/551 (0%)
Frame = +3
Query: 147 RSCLMLWACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGT 323
R L LW V + + V +RPLR+ + SWGDEWL+ ++D++ +GP + WNITGTY+G+
Sbjct: 23 RVVLGLWV--VLAVLRPVTGLRPLRDRAHSWGDEWLYIRKDENALGPFSYWNITGTYKGS 80
Query: 324 WNSQNSINGSLRFPDPGKFEGVAVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVQSA 503
W +S N S RFPD GK G ++ EL S+PTKITGVHYVQGVIIFHDV D+ V +
Sbjct: 81 WRFLDSTNSSARFPDFGKSSGNSIIELVSSPTKITGVHYVQGVIIFHDVFDNEHE-VGGS 139
Query: 504 QIRVEGVYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWR 683
QIRVEGVYIWPFRQLRMV NSGK+ +L QE++YILSNPYHLLGVFSSQVFQESP EK WR
Sbjct: 140 QIRVEGVYIWPFRQLRMVANSGKEGELSQEEEYILSNPYHLLGVFSSQVFQESPREKIWR 199
Query: 684 RKYSPTYDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLN 863
+++SP Y+MEK CNIEIAAQ+SR STQ DG +RY LEGLMESPS DD G+CFSP++LN
Sbjct: 200 KRHSPIYEMEKRCNIEIAAQISRVSSTQNDGDRDRYHLEGLMESPSVDDDGDCFSPLLLN 259
Query: 864 ATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDA 1043
ATSVNIE YYNKAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI +IGQQAIMDA
Sbjct: 260 ATSVNIEAYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDA 319
Query: 1044 YLCLLHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPMINGEGWEAMRR 1223
YLCLLHLTAGILVESL SIFEMRYLLAIWKA+RPM NGEGWE MRR
Sbjct: 320 YLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWETMRR 379
Query: 1224 ELSVLYSRFYXXXXXXXXXMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIV 1403
ELSVLYSRFY MY+ HNFL+PILL+MYSFWIPQI+TNV+RDSRKPLHP+YI+
Sbjct: 380 ELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYIL 439
Query: 1404 GMTITRLAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQI 1583
GMT+TRLA+PLY+FGCPNNFMRIE K+WCICL +FMGLQASILLLQ+YLGSRCFIPRQI
Sbjct: 440 GMTVTRLAVPLYMFGCPNNFMRIEPSKSWCICLGIFMGLQASILLLQHYLGSRCFIPRQI 499
Query: 1584 LPEKYSYYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKME 1763
LPEKYSYYRR +QDT+ TDCVICMT ID++ RS +CMVTPCDHFFHSGCLQRWMDIKME
Sbjct: 500 LPEKYSYYRRSNQDTNHVTDCVICMTTIDITHRSNECMVTPCDHFFHSGCLQRWMDIKME 559
Query: 1764 CPTCRRPLPPA 1796
CPTCRRPLPPA
Sbjct: 560 CPTCRRPLPPA 570
>gb|AEL99131.1| RING/U-box domain-containing protein, partial [Silene latifolia]
Length = 555
Score = 836 bits (2160), Expect = 0.0
Identities = 405/540 (75%), Positives = 454/540 (84%), Gaps = 1/540 (0%)
Frame = +3
Query: 180 FYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGTWNSQNSINGSL 356
F L V ++RPL+E S+SWGDEWLF K++D+ +GP ++WNI+GTYRG W S N S
Sbjct: 19 FALLSQVSSLRPLKEQSRSWGDEWLFVKKEDNNIGPFSSWNISGTYRGNWKFTESANISA 78
Query: 357 RFPDPGKFEGVAVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVQSAQIRVEGVYIWP 536
RFPD K +G ++ EL STPTKITGVHYVQGVIIFHDV D+ G AQIRVEGVYIWP
Sbjct: 79 RFPDFKKSDGSSIVELMSTPTKITGVHYVQGVIIFHDVFDNDREG-GGAQIRVEGVYIWP 137
Query: 537 FRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPTYDMEK 716
FRQLRMV NSGKD +LG E+DY LSNPYHLLGVFSSQVFQESP + WR+K S D+EK
Sbjct: 138 FRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQVFQESP--RVWRKKKSQVQDIEK 195
Query: 717 HCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNIEVYYN 896
HCNIEIAAQVSR PS Q DG+H+RY LEGLMESPS D+ G+CFSP++LNATSVNIEVYYN
Sbjct: 196 HCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADEDGDCFSPLLLNATSVNIEVYYN 255
Query: 897 KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLHLTAGI 1076
KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI ++GQQAIMDAYLCLLHLTAGI
Sbjct: 256 KAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMVGQQAIMDAYLCLLHLTAGI 315
Query: 1077 LVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLYSRFYX 1256
LVESL SIFEMRYLLAIWKA+RP +GEGWEAMRRELSVLYSRFY
Sbjct: 316 LVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWEAMRRELSVLYSRFYG 375
Query: 1257 XXXXXXXXMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITRLAIPL 1436
MY+ H++L+PILL+MYSFWIPQIVTN++RDSRKPLHP+YI+GMTITRLAIPL
Sbjct: 376 ILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDSRKPLHPHYILGMTITRLAIPL 435
Query: 1437 YVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYSYYRRF 1616
YVFGCPNNFMRI+ DK WC+CL FMG Q+ +LL+Q+Y GSRCFIPRQILPEKYSYYRRF
Sbjct: 436 YVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYFGSRCFIPRQILPEKYSYYRRF 495
Query: 1617 DQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 1796
DQD++ TDCVICM AIDLSQRS+DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR LPPA
Sbjct: 496 DQDSNRTTDCVICMAAIDLSQRSSDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 555
>gb|AEL99132.1| RING/U-box domain-containing protein, partial [Silene latifolia]
Length = 555
Score = 832 bits (2149), Expect = 0.0
Identities = 405/540 (75%), Positives = 451/540 (83%), Gaps = 1/540 (0%)
Frame = +3
Query: 180 FYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGTWNSQNSINGSL 356
F L ++RPL+E S+SWGDEWLF K++D+ +GP ++WNI+GTYRG W S N S
Sbjct: 19 FALLSPASSLRPLKEQSRSWGDEWLFVKKEDNNIGPFSSWNISGTYRGNWKFTESANISA 78
Query: 357 RFPDPGKFEGVAVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVQSAQIRVEGVYIWP 536
RFPD K EG ++ EL STPTKITGVHYVQGVIIFHDV D+ G AQIRVEGVYIWP
Sbjct: 79 RFPDFKKSEGSSIVELMSTPTKITGVHYVQGVIIFHDVFDNDREG-GGAQIRVEGVYIWP 137
Query: 537 FRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPTYDMEK 716
FRQLRMV NSGKD +LG E+DY LSNPYHLLGVFSSQVFQESP + WR+K S D+EK
Sbjct: 138 FRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQVFQESP--RVWRKKKSQVQDIEK 195
Query: 717 HCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNIEVYYN 896
HCNIEIAAQVSR PS Q DG+H+RY LEGLMESPS D+ G+CFSP++LNATSVNIEVYYN
Sbjct: 196 HCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADEDGDCFSPLLLNATSVNIEVYYN 255
Query: 897 KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLHLTAGI 1076
KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI +IGQQAIMDAYLCLLHLTAGI
Sbjct: 256 KAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGI 315
Query: 1077 LVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLYSRFYX 1256
LVESL SIFEMRYLLAIWKA+RP +GEGW AMRRELSVLYSRFY
Sbjct: 316 LVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWGAMRRELSVLYSRFYG 375
Query: 1257 XXXXXXXXMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITRLAIPL 1436
MY+ H++L+PILL+MYSFWIPQIVTN++RDSRKPLHP+YI+GMTITRLAIPL
Sbjct: 376 ILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDSRKPLHPHYILGMTITRLAIPL 435
Query: 1437 YVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYSYYRRF 1616
YVFGCPNNFMRI+ DK WC+CL FMG Q+ +LL+Q+Y GSRCFIPRQILPEKYSYYRRF
Sbjct: 436 YVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYFGSRCFIPRQILPEKYSYYRRF 495
Query: 1617 DQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 1796
DQD++ TDCVICM AIDLSQRS DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR LPPA
Sbjct: 496 DQDSNRTTDCVICMAAIDLSQRSGDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 555
>ref|XP_003543332.1| PREDICTED: uncharacterized RING finger protein C947.10-like [Glycine
max]
Length = 570
Score = 821 bits (2120), Expect = 0.0
Identities = 398/545 (73%), Positives = 452/545 (82%), Gaps = 1/545 (0%)
Frame = +3
Query: 165 WACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDD-DVGPSAAWNITGTYRGTWNSQNS 341
W V L V +RPLRE ++ W DE LF ++++ ++GP + WNITGTY+GTW +
Sbjct: 27 WWWVVLLLVNPVAGLRPLRERTRPWDDEGLFTRKEESNLGPFSQWNITGTYKGTWKFLDI 86
Query: 342 INGSLRFPDPGKFEGVAVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVQSAQIRVEG 521
NGS RFPD K G +V ELASTPTKI+GVHYVQGV+IFHDV D+ V +QIR+EG
Sbjct: 87 TNGSSRFPDIRKTNGNSVIELASTPTKISGVHYVQGVVIFHDVFDNE-YDVGGSQIRIEG 145
Query: 522 VYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPT 701
VYIWPFRQLRMV NSGK+ +L Q +DYILSNPYHLLGVFSSQV Q+S +K RRK+S
Sbjct: 146 VYIWPFRQLRMVANSGKEGELNQNEDYILSNPYHLLGVFSSQVLQDSSRDKMLRRKHSLI 205
Query: 702 YDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNI 881
+DMEKHCNIEIAAQ+S PS +G+H+ + LEGLMESPS +D G+CFSP++LNATSV I
Sbjct: 206 HDMEKHCNIEIAAQISHLPSQNNEGEHDHFHLEGLMESPSANDDGDCFSPLLLNATSVKI 265
Query: 882 EVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLH 1061
EVYYNKAVNYTLMVTF+SFLQVLLLIRQMEHS+TQSGAAKVSI +IGQQAIMDAYLCLLH
Sbjct: 266 EVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLH 325
Query: 1062 LTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLY 1241
LTAGILVESL SIFEMRYLLAIWKANRP+ NGEGWE MRRELSVLY
Sbjct: 326 LTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWETMRRELSVLY 385
Query: 1242 SRFYXXXXXXXXXMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITR 1421
SRFY MY+ HN+L+PILL+ YSFWIPQI+TNV+RDSRKPLHP+YI+G+T+TR
Sbjct: 386 SRFYGILLGGILLMYEFHNYLRPILLLTYSFWIPQIITNVIRDSRKPLHPHYILGITVTR 445
Query: 1422 LAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYS 1601
LAIPLY+FGCPNNFMRIE DK+WC+CL VF+GLQA+ILLLQ+YLGSR FIPRQILPEKYS
Sbjct: 446 LAIPLYIFGCPNNFMRIEPDKSWCVCLAVFIGLQAAILLLQHYLGSRWFIPRQILPEKYS 505
Query: 1602 YYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRR 1781
YYRRFDQDT ATDCVICMTAIDLSQRS DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR
Sbjct: 506 YYRRFDQDTRHATDCVICMTAIDLSQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRR 565
Query: 1782 PLPPA 1796
PLPPA
Sbjct: 566 PLPPA 570