BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008843
         (1893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   454   e-125
ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   424   e-116
ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis ...   424   e-116
ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arab...   423   e-116
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   419   e-114

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
            gi|296084279|emb|CBI24667.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  454 bits (1167), Expect = e-125
 Identities = 227/304 (74%), Positives = 260/304 (85%)
 Frame = -3

Query: 1150 ISSEVEGVILQDKVVDLAQCEVKDANPNASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLP 971
            ISS+ E  + Q   VD    + +  + ++SNGRVMLIDGTSIIYRAYYKLL+KLHHGYL 
Sbjct: 80   ISSKSERKLCQGAFVDSVDHKERKMDISSSNGRVMLIDGTSIIYRAYYKLLAKLHHGYLS 139

Query: 970  DADGNGDWVLTIFTALSLVFDVLEFAPSHAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFR 791
             ADGNGDWVLTIF ALSL+ DVL+F PSH AVVFDH+G+PFG T + S  S  AKGLNFR
Sbjct: 140  HADGNGDWVLTIFAALSLIVDVLDFIPSHVAVVFDHNGIPFGHTSISSKESIMAKGLNFR 199

Query: 790  HTLYPQYKSQRDPTPDTVVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAASSVADGF 611
            HTLYP YKS R PTPDT+VQGLQYLKASIKAMS+KVIEVPGVEADDVIGTL+  SV  G+
Sbjct: 200  HTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPGVEADDVIGTLSVRSVDAGY 259

Query: 610  KVRVVSPDKDFFQILSPSLRLLRIASRGSDMVSFGLEDFAGRYGTLEPTQFVDMIALTGD 431
            KVRVVSPDKDFFQILSPSLRLLRIA RG +M SFG+EDFA RYG LEP+QFVD+I+L GD
Sbjct: 260  KVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGMEDFAKRYGNLEPSQFVDVISLVGD 319

Query: 430  KADNIPGVEGIGDVHALKLITKFGTVENLLQCVDQVEEEHIRKALIANADQAIVNKNLAM 251
            K+DNIPGVEGIG+VHA++LITKFGT+ENLLQCVDQV+EE IRKALI+ ADQA+++KNLA+
Sbjct: 320  KSDNIPGVEGIGNVHAVQLITKFGTLENLLQCVDQVQEERIRKALISGADQAVLSKNLAL 379

Query: 250  LRSD 239
            LR D
Sbjct: 380  LRCD 383


>ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
            gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
            thaliana] gi|332645358|gb|AEE78879.1| 5'-3'
            exonuclease-like protein [Arabidopsis thaliana]
            gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 425

 Score =  424 bits (1091), Expect = e-116
 Identities = 207/276 (75%), Positives = 246/276 (89%)
 Frame = -3

Query: 1066 ASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPS 887
            +SNGRVMLIDGTSIIYRAYYKLL++L+HG+L  ADGN DWVLTIF++LSL+ DVL+F PS
Sbjct: 91   SSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPS 150

Query: 886  HAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKAS 707
            H AVVFDHDGVP+G T   STG   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKAS
Sbjct: 151  HVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKAS 210

Query: 706  IKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRG 527
            IKAMS+KVIEVPGVEADDVIGTLA  S++ GFKVRVVSPDKDFFQILSPSLRLLR+  RG
Sbjct: 211  IKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRG 270

Query: 526  SDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVEN 347
            S+M SFG+EDFA ++G LEP QFVD+IAL GDK+DNIPGV+GIG+VHA++LI++FGT+EN
Sbjct: 271  SEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLEN 330

Query: 346  LLQCVDQVEEEHIRKALIANADQAIVNKNLAMLRSD 239
            LLQ VD+++E  I+++LIA+ADQAI++K LA+LRSD
Sbjct: 331  LLQSVDEIKEGKIKESLIASADQAILSKKLALLRSD 366


>ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 448

 Score =  424 bits (1091), Expect = e-116
 Identities = 207/276 (75%), Positives = 246/276 (89%)
 Frame = -3

Query: 1066 ASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPS 887
            +SNGRVMLIDGTSIIYRAYYKLL++L+HG+L  ADGN DWVLTIF++LSL+ DVL+F PS
Sbjct: 114  SSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPS 173

Query: 886  HAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKAS 707
            H AVVFDHDGVP+G T   STG   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKAS
Sbjct: 174  HVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKAS 233

Query: 706  IKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRG 527
            IKAMS+KVIEVPGVEADDVIGTLA  S++ GFKVRVVSPDKDFFQILSPSLRLLR+  RG
Sbjct: 234  IKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRG 293

Query: 526  SDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVEN 347
            S+M SFG+EDFA ++G LEP QFVD+IAL GDK+DNIPGV+GIG+VHA++LI++FGT+EN
Sbjct: 294  SEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLEN 353

Query: 346  LLQCVDQVEEEHIRKALIANADQAIVNKNLAMLRSD 239
            LLQ VD+++E  I+++LIA+ADQAI++K LA+LRSD
Sbjct: 354  LLQSVDEIKEGKIKESLIASADQAILSKKLALLRSD 389


>ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
            lyrata] gi|297321959|gb|EFH52380.1| hypothetical protein
            ARALYDRAFT_485561 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  423 bits (1087), Expect = e-116
 Identities = 206/276 (74%), Positives = 246/276 (89%)
 Frame = -3

Query: 1066 ASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPS 887
            +SNGRVMLIDGTSIIYRAYYKLL++L+HG+L  ADGN DWVLTIF++LSL+ DVL+F PS
Sbjct: 120  SSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPS 179

Query: 886  HAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKAS 707
            H AVVFDHDGVP+G T   STG   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKAS
Sbjct: 180  HVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKAS 239

Query: 706  IKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRG 527
            IKAMS+KVIEVPGVEADDVIGTLA  S++ GFKVRVVSPDKDFFQILSPSLRLLR+  RG
Sbjct: 240  IKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRG 299

Query: 526  SDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVEN 347
            S+M SFG+EDFA ++G LEP QFVD+IAL GDK+DNIPGV+GIG+VHA++LI++FG++EN
Sbjct: 300  SEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGSLEN 359

Query: 346  LLQCVDQVEEEHIRKALIANADQAIVNKNLAMLRSD 239
            LLQ VD+++E  I+++LIA+ADQAI++K LA+LRSD
Sbjct: 360  LLQSVDEIKEGKIKESLIASADQAILSKKLALLRSD 395


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  419 bits (1076), Expect = e-114
 Identities = 208/277 (75%), Positives = 244/277 (88%)
 Frame = -3

Query: 1069 NASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAP 890
            N ++ RVMLIDGTSII+RAYYKLL+KLHHG+L  ADGNGDWVLTIFTALSL+ DVLE  P
Sbjct: 127  NPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEIMP 186

Query: 889  SHAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKA 710
            SH AVVFDHDG P+G T + S  ++ +KG  FRHT+YP YKS R PTPDTVVQGLQYLKA
Sbjct: 187  SHVAVVFDHDGHPYGHTYISSNENFMSKGSTFRHTIYPAYKSNRAPTPDTVVQGLQYLKA 246

Query: 709  SIKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASR 530
            SIK+MS+KVIEVPGVEADDVIGTLA  SVA G KVRVVSPDKDFFQILSPSLRLLRIASR
Sbjct: 247  SIKSMSIKVIEVPGVEADDVIGTLALRSVAVGCKVRVVSPDKDFFQILSPSLRLLRIASR 306

Query: 529  GSDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVE 350
            G +MVSFGLEDFA ++G LEP+QFVD+++L GDK+DNIPGV+GIG+V+A++LIT+FGT+E
Sbjct: 307  GIEMVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLE 366

Query: 349  NLLQCVDQVEEEHIRKALIANADQAIVNKNLAMLRSD 239
            NLLQ VDQVE+E I+K L+ NA+QAI++K+LA LRSD
Sbjct: 367  NLLQHVDQVEDERIKKMLVTNAEQAILSKDLATLRSD 403