BLASTX nr result

ID: Coptis23_contig00008836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008836
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ15126.1| pyruvate dehydrogenase complex E1 alpha subunit d...   175   3e-42
sp|P52903.1|ODPA_SOLTU RecName: Full=Pyruvate dehydrogenase E1 c...   172   3e-41
gb|ABA40441.1| unknown [Solanum tuberosum]                            171   6e-41
sp|P52902.1|ODPA_PEA RecName: Full=Pyruvate dehydrogenase E1 com...   171   8e-41
gb|AAG43499.1|AF209924_1 pyruvate dehydrogenase, partial [Solanu...   170   1e-40

>gb|AFJ15126.1| pyruvate dehydrogenase complex E1 alpha subunit dehydrogenase
           [Camellia sinensis]
          Length = 393

 Score =  175 bits (444), Expect = 3e-42
 Identities = 91/151 (60%), Positives = 104/151 (68%)
 Frame = -3

Query: 453 NLSRSFSTTADTNLTIETSIPFTSHKIDPPSRNVTTSPSXXXXXXXXXXXXXXXXXXXXX 274
           +L RSFST   T++T+ETS+PFT H  +PPSR VTT+P                      
Sbjct: 23  SLRRSFSTDDSTSITVETSVPFTGHNCEPPSRTVTTTPKE-------------------- 62

Query: 273 XXLMDFFKTMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEXXXXXXXXXXXAY 94
             L+ FF+ M +MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGME           AY
Sbjct: 63  --LITFFRDMAMMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDCIITAY 120

Query: 93  RDHCLFLGRGGSLVEAFSELMGRKDGCSKGK 1
           RDHCLFLGRGG+L+EAF+ELMGRK GCSKGK
Sbjct: 121 RDHCLFLGRGGTLLEAFAELMGRKAGCSKGK 151


>sp|P52903.1|ODPA_SOLTU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha,
           mitochondrial; Short=PDHE1-A; Flags: Precursor
           gi|473169|emb|CAA81558.1| E1 alpha subunit of pyruvate
           dehydrogenase precursor [Solanum tuberosum]
          Length = 391

 Score =  172 bits (436), Expect = 3e-41
 Identities = 89/149 (59%), Positives = 102/149 (68%)
 Frame = -3

Query: 447 SRSFSTTADTNLTIETSIPFTSHKIDPPSRNVTTSPSXXXXXXXXXXXXXXXXXXXXXXX 268
           +R  S+ +   +T+ETS+PFTSH IDPPSR+V TSP                        
Sbjct: 23  TRRLSSDSTATITVETSLPFTSHNIDPPSRSVETSPKE---------------------- 60

Query: 267 LMDFFKTMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEXXXXXXXXXXXAYRD 88
           LM FFK M  MRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GME           AYRD
Sbjct: 61  LMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRD 120

Query: 87  HCLFLGRGGSLVEAFSELMGRKDGCSKGK 1
           HC+FLGRGG+LVEAF+ELMGR+DGCS+GK
Sbjct: 121 HCIFLGRGGTLVEAFAELMGRRDGCSRGK 149


>gb|ABA40441.1| unknown [Solanum tuberosum]
          Length = 391

 Score =  171 bits (433), Expect = 6e-41
 Identities = 88/149 (59%), Positives = 102/149 (68%)
 Frame = -3

Query: 447 SRSFSTTADTNLTIETSIPFTSHKIDPPSRNVTTSPSXXXXXXXXXXXXXXXXXXXXXXX 268
           +R  S+ +   +T+ETS+PFTSH IDPPSR+V TSP                        
Sbjct: 23  TRRLSSDSTATITVETSLPFTSHNIDPPSRSVETSPKE---------------------- 60

Query: 267 LMDFFKTMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEXXXXXXXXXXXAYRD 88
           LM FFK M  MRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GME           AYRD
Sbjct: 61  LMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRD 120

Query: 87  HCLFLGRGGSLVEAFSELMGRKDGCSKGK 1
           HC+FLGRGG+LVE+F+ELMGR+DGCS+GK
Sbjct: 121 HCIFLGRGGTLVESFAELMGRRDGCSRGK 149


>sp|P52902.1|ODPA_PEA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha,
           mitochondrial; Short=PDHE1-A; Flags: Precursor
           gi|1263302|gb|AAA97411.1| pyruvate dehydrogenase E1
           alpha subunit [Pisum sativum]
          Length = 397

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/150 (58%), Positives = 101/150 (67%)
 Frame = -3

Query: 450 LSRSFSTTADTNLTIETSIPFTSHKIDPPSRNVTTSPSXXXXXXXXXXXXXXXXXXXXXX 271
           L+R  S+     LTIETS+PFT+H  DPPSR+VTTSPS                      
Sbjct: 28  LNRPISSDTTATLTIETSLPFTAHNCDPPSRSVTTSPSE--------------------- 66

Query: 270 XLMDFFKTMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEXXXXXXXXXXXAYR 91
            L+ FF+TM LMRRMEIAADSLYKA LIRGFCHLYDGQEAVA+GME           AYR
Sbjct: 67  -LLSFFRTMALMRRMEIAADSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYR 125

Query: 90  DHCLFLGRGGSLVEAFSELMGRKDGCSKGK 1
           DHC FLGRGG+L+  ++ELMGR+DGCSKGK
Sbjct: 126 DHCTFLGRGGTLLRVYAELMGRRDGCSKGK 155


>gb|AAG43499.1|AF209924_1 pyruvate dehydrogenase, partial [Solanum lycopersicum]
          Length = 391

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/149 (58%), Positives = 102/149 (68%)
 Frame = -3

Query: 447 SRSFSTTADTNLTIETSIPFTSHKIDPPSRNVTTSPSXXXXXXXXXXXXXXXXXXXXXXX 268
           +R  S+ +   +T+ETS+PFTSH +DPPSR+V TSP                        
Sbjct: 23  TRRLSSDSTATITVETSLPFTSHNVDPPSRSVETSPME---------------------- 60

Query: 267 LMDFFKTMVLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEXXXXXXXXXXXAYRD 88
           LM FFK M  MRRMEIAADSLYKAKLIRGFCHLYDGQEAVA+GME           AYRD
Sbjct: 61  LMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRD 120

Query: 87  HCLFLGRGGSLVEAFSELMGRKDGCSKGK 1
           HC+FLGRGG+LVE+F+ELMGR+DGCS+GK
Sbjct: 121 HCIFLGRGGTLVESFAELMGRRDGCSRGK 149


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