BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008835
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...   103   1e-20
ref|XP_004143850.1| PREDICTED: dof zinc finger protein DOF4.6-li...   102   3e-20
ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g...   102   3e-20
dbj|BAK07153.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   4e-20
emb|CAJ29308.1| dof zinc finger protein 2 [Hordeum vulgare subsp...   102   4e-20

>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
 Frame = -3

Query: 224 PQKQ----CPRCNSVNTKFSYYNNHSPNQPRYHCKTCEREWTEGGSLRDIPIGGTSRKDK 57
           PQK+    CPRCNS NTKF YYNN+S  QPRY CKTC R WTEGGSLR IP+GG SRK+K
Sbjct: 35  PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNK 94

Query: 56  QPSKRDYSSADALSNMLS 3
           + S    SS+  L +++S
Sbjct: 95  RSSASSSSSSKKLPDLIS 112


>ref|XP_004143850.1| PREDICTED: dof zinc finger protein DOF4.6-like [Cucumis sativus]
          Length = 314

 Score =  102 bits (255), Expect = 3e-20
 Identities = 47/69 (68%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
 Frame = -3

Query: 224 PQKQ----CPRCNSVNTKFSYYNNHSPNQPRYHCKTCEREWTEGGSLRDIPIGGTSRKDK 57
           PQK+    CPRCNS NTKF YYNN+S  QPRY CKTC R WTEGGSLR+IP+GG SRK+K
Sbjct: 37  PQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNK 96

Query: 56  QPSKRDYSS 30
           +PS    SS
Sbjct: 97  RPSSNSSSS 105


>ref|XP_002303678.1| f-box family protein [Populus trichocarpa]
           gi|222841110|gb|EEE78657.1| f-box family protein
           [Populus trichocarpa]
          Length = 279

 Score =  102 bits (255), Expect = 3e-20
 Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
 Frame = -3

Query: 224 PQKQ----CPRCNSVNTKFSYYNNHSPNQPRYHCKTCEREWTEGGSLRDIPIGGTSRKDK 57
           PQK+    CPRCNS NTKF YYNN+S  QPRY CKTC R WTEGGSLR+IP+GG SRK+K
Sbjct: 35  PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNK 94

Query: 56  QPSKRDYSSADALSNMLS 3
           + S    SS+  L ++++
Sbjct: 95  RSSASSSSSSKKLPDLIT 112


>dbj|BAK07153.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
 Frame = -3

Query: 224 PQKQ----CPRCNSVNTKFSYYNNHSPNQPRYHCKTCEREWTEGGSLRDIPIGGTSRKDK 57
           PQK+    CPRCNS NTKF YYNN+S  QPRY CKTC R WTEGGSLR++P+GG SRK+K
Sbjct: 61  PQKEKAINCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK 120

Query: 56  QPSKRDYSSADALSN 12
           + S    +SA A ++
Sbjct: 121 RSSSSSSASASAAAS 135


>emb|CAJ29308.1| dof zinc finger protein 2 [Hordeum vulgare subsp. vulgare]
           gi|326512816|dbj|BAK03315.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 380

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
 Frame = -3

Query: 224 PQKQ----CPRCNSVNTKFSYYNNHSPNQPRYHCKTCEREWTEGGSLRDIPIGGTSRKDK 57
           PQK+    CPRCNS NTKF YYNN+S  QPRY CKTC R WTEGGSLR++P+GG SRK+K
Sbjct: 76  PQKEKAINCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK 135

Query: 56  QPSKRDYSSADALSN 12
           + S    +SA A ++
Sbjct: 136 RSSSSSSASASAAAS 150