BLASTX nr result

ID: Coptis23_contig00008833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008833
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556381.1| PREDICTED: uncharacterized protein LOC100806...   244   3e-62
ref|XP_003536216.1| PREDICTED: uncharacterized protein LOC100789...   243   7e-62
gb|AFK48050.1| unknown [Medicago truncatula]                          243   9e-62
ref|XP_003590857.1| hypothetical protein MTR_1g075990, partial [...   243   9e-62
ref|XP_002311674.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-61

>ref|XP_003556381.1| PREDICTED: uncharacterized protein LOC100806497 [Glycine max]
          Length = 189

 Score =  244 bits (623), Expect = 3e-62
 Identities = 118/134 (88%), Positives = 122/134 (91%)
 Frame = -2

Query: 689 TLSRYEGQKRRDWNTFGQYLRNHKPPLSLSRCSSAHVLEFLRYLDQFGKTKVHNQICPFY 510
           TLSRYE QKRRDWNTFGQYLRNH+PPLSLSRCS AHVLEFLRYLDQFGKTKVH Q+CPF+
Sbjct: 43  TLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFF 102

Query: 509 GHXXXXXXXXXPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQS 330
           GH         PLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQ+
Sbjct: 103 GHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQA 162

Query: 329 KARGISYEKKKRKR 288
           KARGISYEKKKRKR
Sbjct: 163 KARGISYEKKKRKR 176


>ref|XP_003536216.1| PREDICTED: uncharacterized protein LOC100789834 isoform 1 [Glycine
           max] gi|356535366|ref|XP_003536217.1| PREDICTED:
           uncharacterized protein LOC100789834 isoform 2 [Glycine
           max]
          Length = 199

 Score =  243 bits (620), Expect = 7e-62
 Identities = 117/134 (87%), Positives = 122/134 (91%)
 Frame = -2

Query: 689 TLSRYEGQKRRDWNTFGQYLRNHKPPLSLSRCSSAHVLEFLRYLDQFGKTKVHNQICPFY 510
           TLSRYE QKRRDWNTFGQYLRNH+PPLSL+RCS AHVLEFLRYLDQFGKTKVH Q+CPF+
Sbjct: 53  TLSRYENQKRRDWNTFGQYLRNHRPPLSLARCSGAHVLEFLRYLDQFGKTKVHTQLCPFF 112

Query: 509 GHXXXXXXXXXPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQS 330
           GH         PLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQ+
Sbjct: 113 GHPNPPAACPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQA 172

Query: 329 KARGISYEKKKRKR 288
           KARGISYEKKKRKR
Sbjct: 173 KARGISYEKKKRKR 186


>gb|AFK48050.1| unknown [Medicago truncatula]
          Length = 197

 Score =  243 bits (619), Expect = 9e-62
 Identities = 118/134 (88%), Positives = 122/134 (91%)
 Frame = -2

Query: 689 TLSRYEGQKRRDWNTFGQYLRNHKPPLSLSRCSSAHVLEFLRYLDQFGKTKVHNQICPFY 510
           TLSRYE QKRRDWNTFGQYLRNH+PPLSLSRCS AHVLEFLRYLDQFGKTKVH+QICPF+
Sbjct: 50  TLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSQICPFF 109

Query: 509 GHXXXXXXXXXPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQS 330
           GH         PLRQAWGSLDALIGRLRAAFEENGGKPE NPFGARAVRL+LREVRDSQS
Sbjct: 110 GHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEDNPFGARAVRLFLREVRDSQS 169

Query: 329 KARGISYEKKKRKR 288
           KARGISYEKKKRKR
Sbjct: 170 KARGISYEKKKRKR 183


>ref|XP_003590857.1| hypothetical protein MTR_1g075990, partial [Medicago truncatula]
           gi|355479905|gb|AES61108.1| hypothetical protein
           MTR_1g075990, partial [Medicago truncatula]
          Length = 183

 Score =  243 bits (619), Expect = 9e-62
 Identities = 118/134 (88%), Positives = 122/134 (91%)
 Frame = -2

Query: 689 TLSRYEGQKRRDWNTFGQYLRNHKPPLSLSRCSSAHVLEFLRYLDQFGKTKVHNQICPFY 510
           TLSRYE QKRRDWNTFGQYLRNH+PPLSLSRCS AHVLEFLRYLDQFGKTKVH+QICPF+
Sbjct: 50  TLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSQICPFF 109

Query: 509 GHXXXXXXXXXPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQS 330
           GH         PLRQAWGSLDALIGRLRAAFEENGGKPE NPFGARAVRL+LREVRDSQS
Sbjct: 110 GHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEDNPFGARAVRLFLREVRDSQS 169

Query: 329 KARGISYEKKKRKR 288
           KARGISYEKKKRKR
Sbjct: 170 KARGISYEKKKRKR 183


>ref|XP_002311674.1| predicted protein [Populus trichocarpa] gi|222851494|gb|EEE89041.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  241 bits (615), Expect = 3e-61
 Identities = 117/134 (87%), Positives = 121/134 (90%)
 Frame = -2

Query: 689 TLSRYEGQKRRDWNTFGQYLRNHKPPLSLSRCSSAHVLEFLRYLDQFGKTKVHNQICPFY 510
           TLSRYE QKRRDWNTFGQYLRNH+PPLSLSRCS AHVLEFLRYLDQFGKTKVH Q+CPF+
Sbjct: 3   TLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFF 62

Query: 509 GHXXXXXXXXXPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQS 330
           GH         PLRQAWGSLDALIGRLRAAFEE+GGKPE NPFGARAVRLYLREVRDSQS
Sbjct: 63  GHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEEHGGKPENNPFGARAVRLYLREVRDSQS 122

Query: 329 KARGISYEKKKRKR 288
           KARGISYEKKKRKR
Sbjct: 123 KARGISYEKKKRKR 136


Top