BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008823
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274498.1| PREDICTED: 50S ribosomal protein L1, chlorop...   434   e-119
emb|CBI24963.3| unnamed protein product [Vitis vinifera]              429   e-117
ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
gb|ABK96759.1| unknown [Populus trichocarpa x Populus deltoides]      427   e-117
ref|XP_004149726.1| PREDICTED: 50S ribosomal protein L1, chlorop...   424   e-116

>ref|XP_002274498.1| PREDICTED: 50S ribosomal protein L1, chloroplastic [Vitis vinifera]
          Length = 347

 Score =  434 bits (1117), Expect = e-119
 Identities = 237/347 (68%), Positives = 268/347 (77%), Gaps = 6/347 (1%)
 Frame = -1

Query: 1292 ASSSSALILTHRTPITVLPPEE---ASFCYKVKPFF--FSSFK-ALSINQSRPRTSWPCF 1131
            A+S  +L+LT+    + LP ++    S  +K KP F  FS +  AL   + RP       
Sbjct: 5    ATSPFSLMLTYAAS-SPLPTQDFIAPSLSFKTKPLFRAFSLYPLALQARERRP------- 56

Query: 1130 FNRNNQLLFVTSAVSTQAQVXXXXXXXXXXLAAPVQXXXXXXXXXXXXXXXXKSDRTRSK 951
             + N     V +A++ +A+V              V                 K DRTRSK
Sbjct: 57   -SGNGPYDVVVAALAAEAEVAEAVEEVEGGEGDAVSTAPPPKPKKGKAALLLKRDRTRSK 115

Query: 950  RFLEIQKLRENKKEYDVPTALSLLKEMAKTKFVETAEAHFRLNIDPKYNDQQLRATVNLP 771
            RFLEIQKLRENKKEYD+ TA+SLLK+MA T+FVETAEAHFRLNIDPKYNDQQLRATVNLP
Sbjct: 116  RFLEIQKLRENKKEYDLQTAISLLKQMASTRFVETAEAHFRLNIDPKYNDQQLRATVNLP 175

Query: 770  KGTGQTVKVAVLTQGEKVDEAKSAGADLVGGDDLIAQIKGGQMDFDKLIASPDMMPKVAS 591
            KGTGQTVKVAVLTQGEK DEAK+AGADLVGG+DLI QIKGG MDFDKLIASPDMMPKVAS
Sbjct: 176  KGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMMPKVAS 235

Query: 590  LGKILGPRGLMPNPKAGTVTTDIPQAISEFKKGKVEYRADKTGIVHLPFGKADFSDEDLI 411
            LGK+LGPRGLMPNPKAGTVTT+IPQAI+EFKKGKVEYRADKTGIVHLPFGKADFS+EDL+
Sbjct: 236  LGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKKGKVEYRADKTGIVHLPFGKADFSEEDLL 295

Query: 410  INLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFK 270
             NL+AAVKSV+TNKPSGAKGVYW+SAHICSSMGPSIRLNIREMLD+K
Sbjct: 296  ANLIAAVKSVETNKPSGAKGVYWRSAHICSSMGPSIRLNIREMLDYK 342


>emb|CBI24963.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  429 bits (1102), Expect = e-117
 Identities = 212/233 (90%), Positives = 227/233 (97%)
 Frame = -1

Query: 968 DRTRSKRFLEIQKLRENKKEYDVPTALSLLKEMAKTKFVETAEAHFRLNIDPKYNDQQLR 789
           DRTRSKRFLEIQKLRENKKEYD+ TA+SLLK+MA T+FVETAEAHFRLNIDPKYNDQQLR
Sbjct: 106 DRTRSKRFLEIQKLRENKKEYDLQTAISLLKQMASTRFVETAEAHFRLNIDPKYNDQQLR 165

Query: 788 ATVNLPKGTGQTVKVAVLTQGEKVDEAKSAGADLVGGDDLIAQIKGGQMDFDKLIASPDM 609
           ATVNLPKGTGQTVKVAVLTQGEK DEAK+AGADLVGG+DLI QIKGG MDFDKLIASPDM
Sbjct: 166 ATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 225

Query: 608 MPKVASLGKILGPRGLMPNPKAGTVTTDIPQAISEFKKGKVEYRADKTGIVHLPFGKADF 429
           MPKVASLGK+LGPRGLMPNPKAGTVTT+IPQAI+EFKKGKVEYRADKTGIVHLPFGKADF
Sbjct: 226 MPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKKGKVEYRADKTGIVHLPFGKADF 285

Query: 428 SDEDLIINLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFK 270
           S+EDL+ NL+AAVKSV+TNKPSGAKGVYW+SAHICSSMGPSIRLNIREMLD+K
Sbjct: 286 SEEDLLANLIAAVKSVETNKPSGAKGVYWRSAHICSSMGPSIRLNIREMLDYK 338


>ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|222845674|gb|EEE83221.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  427 bits (1098), Expect = e-117
 Identities = 231/351 (65%), Positives = 264/351 (75%), Gaps = 7/351 (1%)
 Frame = -1

Query: 1298 ACASSSSALILTHRTPITVLPPEEASFCYKVKPFFFSSFKALSINQSRPRTSWPCFFNRN 1119
            AC S++S+L+LT+    TV P +        KP   S +  +S    R  ++W  F+ + 
Sbjct: 5    ACTSTTSSLMLTYAAS-TVHPQDLTPSLLSFKPKTLSLYPLVS---ERKSSNWVKFYAQT 60

Query: 1118 NQL-----LFVTSAVSTQAQVXXXXXXXXXXLAAPVQXXXXXXXXXXXXXXXXK--SDRT 960
                    + V +A++ +A+V              V                     DRT
Sbjct: 61   EAKSRPCRVVVAAALAAEAEVGEEVEETEGEEGGGVATATVIPPKPKKGKAALPLKRDRT 120

Query: 959  RSKRFLEIQKLRENKKEYDVPTALSLLKEMAKTKFVETAEAHFRLNIDPKYNDQQLRATV 780
            RSKRFLEIQKLRE KKEYD+  A+SLLK+ A TKFVE+AEAHFRLNIDPKYNDQQLRATV
Sbjct: 121  RSKRFLEIQKLREIKKEYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYNDQQLRATV 180

Query: 779  NLPKGTGQTVKVAVLTQGEKVDEAKSAGADLVGGDDLIAQIKGGQMDFDKLIASPDMMPK 600
            NLPKGTGQTVKVAVLTQGEK DEAK+AGADLVGG+DLI QIKGG M+FDKLIASPDMMPK
Sbjct: 181  NLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLIASPDMMPK 240

Query: 599  VASLGKILGPRGLMPNPKAGTVTTDIPQAISEFKKGKVEYRADKTGIVHLPFGKADFSDE 420
            VASLGKILGPRGLMPNPKAGTVTTDIPQAI+EFKKGKVEYRADKTGIVH+PFGKADFS+E
Sbjct: 241  VASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPFGKADFSEE 300

Query: 419  DLIINLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL 267
            DL++NL+AAVKSV+ NKPSGAKGVYWKSAHICSSMGPSIRLN REMLD+KL
Sbjct: 301  DLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKL 351


>gb|ABK96759.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 355

 Score =  427 bits (1097), Expect = e-117
 Identities = 230/351 (65%), Positives = 264/351 (75%), Gaps = 7/351 (1%)
 Frame = -1

Query: 1298 ACASSSSALILTHRTPITVLPPEEASFCYKVKPFFFSSFKALSINQSRPRTSWPCFFNRN 1119
            AC S++S+L+LT+    TV P +        KP   S +  +S    R  ++W  F+ + 
Sbjct: 5    ACTSTTSSLMLTYAAS-TVHPQDLTPSLLSFKPKTLSLYPLVS---ERKSSNWVKFYAQT 60

Query: 1118 NQL-----LFVTSAVSTQAQVXXXXXXXXXXLAAPVQXXXXXXXXXXXXXXXXK--SDRT 960
                    + V +A++ +A+V              V                     DRT
Sbjct: 61   EAKSRPCRVVVAAALAAEAEVGEEVEETEGEEGGGVATATVIPPKPKKGKAALPLKRDRT 120

Query: 959  RSKRFLEIQKLRENKKEYDVPTALSLLKEMAKTKFVETAEAHFRLNIDPKYNDQQLRATV 780
            RSKRFLEIQKLRE KKEYD+  A+SLLK+ A TKFVE+AEAHFRLNIDPKYNDQQLRATV
Sbjct: 121  RSKRFLEIQKLREIKKEYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYNDQQLRATV 180

Query: 779  NLPKGTGQTVKVAVLTQGEKVDEAKSAGADLVGGDDLIAQIKGGQMDFDKLIASPDMMPK 600
            NLPKGTGQT+KVAVLTQGEK DEAK+AGADLVGG+DLI QIKGG M+FDKLIASPDMMPK
Sbjct: 181  NLPKGTGQTIKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLIASPDMMPK 240

Query: 599  VASLGKILGPRGLMPNPKAGTVTTDIPQAISEFKKGKVEYRADKTGIVHLPFGKADFSDE 420
            VASLGKILGPRGLMPNPKAGTVTTDIPQAI+EFKKGKVEYRADKTGIVH+PFGKADFS+E
Sbjct: 241  VASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPFGKADFSEE 300

Query: 419  DLIINLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL 267
            DL++NL+AAVKSV+ NKPSGAKGVYWKSAHICSSMGPSIRLN REMLD+KL
Sbjct: 301  DLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKL 351


>ref|XP_004149726.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis
            sativus] gi|449532743|ref|XP_004173340.1| PREDICTED: 50S
            ribosomal protein L1, chloroplastic-like [Cucumis
            sativus]
          Length = 356

 Score =  424 bits (1090), Expect = e-116
 Identities = 227/351 (64%), Positives = 268/351 (76%), Gaps = 7/351 (1%)
 Frame = -1

Query: 1298 ACASSSSALILTHRTPITVLPPEE-----ASFCYKVKPFFFSSFKALS-INQSRPRTSWP 1137
            AC S+  + ++      +V PP++      SF  K++     SF + + + +SR    W 
Sbjct: 3    ACTSTPPSSLMLTSASSSVHPPQDLASSLVSFKAKLQISTIKSFSSSNFLCRSRRSPDWV 62

Query: 1136 CF-FNRNNQLLFVTSAVSTQAQVXXXXXXXXXXLAAPVQXXXXXXXXXXXXXXXXKSDRT 960
               F R  +   + +A + +A V          +AA                   K DR 
Sbjct: 63   FLNFQRRARQHVIVAAFAAEANVAEVEAEEEEGVAA-APTATAPKPKKGKAALPLKRDRR 121

Query: 959  RSKRFLEIQKLRENKKEYDVPTALSLLKEMAKTKFVETAEAHFRLNIDPKYNDQQLRATV 780
            RSKRFLEIQKLRENKKEYD+ TA+SLLKEM+ TKF+E+AEAHFRLNIDPKYNDQQLRATV
Sbjct: 122  RSKRFLEIQKLRENKKEYDLTTAISLLKEMSSTKFIESAEAHFRLNIDPKYNDQQLRATV 181

Query: 779  NLPKGTGQTVKVAVLTQGEKVDEAKSAGADLVGGDDLIAQIKGGQMDFDKLIASPDMMPK 600
            NLPKGTGQTVKVAVLTQGE+ DEAK+AGADLVGG+DLI QIKGG MDFDKLIASPDMMPK
Sbjct: 182  NLPKGTGQTVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMMPK 241

Query: 599  VASLGKILGPRGLMPNPKAGTVTTDIPQAISEFKKGKVEYRADKTGIVHLPFGKADFSDE 420
            VASLGK+LGPRGLMPNPKAGTV T++PQAI+EFK+GKVEYRADKTGIVHLPFGKA+FS+E
Sbjct: 242  VASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKANFSEE 301

Query: 419  DLIINLMAAVKSVDTNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL 267
            DL+INL+AA+KS++TNKPSGAKGVYW+SAHICSSMGPSIRLNIR+MLDFKL
Sbjct: 302  DLLINLLAAIKSIETNKPSGAKGVYWRSAHICSSMGPSIRLNIRDMLDFKL 352