BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008818
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531294.1| conserved hypothetical protein [Ricinus comm...   129   6e-28
ref|XP_002319073.1| predicted protein [Populus trichocarpa] gi|1...   128   8e-28
ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|1...   126   3e-27
ref|XP_004135654.1| PREDICTED: sec-independent protein transloca...   114   1e-23
ref|XP_004171639.1| PREDICTED: sec-independent protein transloca...   113   3e-23

>ref|XP_002531294.1| conserved hypothetical protein [Ricinus communis]
           gi|223529127|gb|EEF31107.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 149

 Score =  129 bits (323), Expect = 6e-28
 Identities = 83/153 (54%), Positives = 102/153 (66%), Gaps = 10/153 (6%)
 Frame = -2

Query: 561 MEISAIITCSVPKT----PLSSCNSTLFNNGSRTILLNNNKKRTS-CLVLNRNRSR---- 409
           MEIS++ T S+ +     P SS +ST FNN +   LLN NKK ++  LVL + RSR    
Sbjct: 1   MEISSM-TLSLSRPTHAFPFSSSHSTFFNNAN---LLNTNKKLSNKTLVLGKTRSRTERT 56

Query: 408 -KGLTVRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKX 232
            KGLT  +LFGLGVPELVVIAGVAALVFGPKKLPEVG+SIGKTVKSFQ+AAKEFESELK 
Sbjct: 57  RKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQEAAKEFESELKK 116

Query: 231 XXXXXXXXXXXXXXXXXXXKQNETKIPSTEESL 133
                              K+ + ++ S++ES+
Sbjct: 117 EPDSALESPGETPTAISEEKKQDAEVSSSKESV 149


>ref|XP_002319073.1| predicted protein [Populus trichocarpa] gi|118483502|gb|ABK93649.1|
           unknown [Populus trichocarpa]
           gi|222857449|gb|EEE94996.1| predicted protein [Populus
           trichocarpa]
          Length = 150

 Score =  128 bits (322), Expect = 8e-28
 Identities = 77/120 (64%), Positives = 87/120 (72%), Gaps = 9/120 (7%)
 Frame = -2

Query: 567 LTMEISAIITCSVPKTP----LSSCNSTLFNNGSRTILLNNNKKRTSCLVLNRN-----R 415
           + MEIS++ T S+PK P     SS NST FN    T    N  K  + LVL +      R
Sbjct: 1   MNMEISSV-TLSLPKPPRSLPFSSSNSTFFN----TTAFFNKTKSCNSLVLGKTTSGSQR 55

Query: 414 SRKGLTVRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 235
           ++KGLT  +LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTV+SFQQAAKEFESELK
Sbjct: 56  AKKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVRSFQQAAKEFESELK 115


>ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|118482145|gb|ABK93003.1|
           unknown [Populus trichocarpa]
           gi|222838213|gb|EEE76578.1| predicted protein [Populus
           trichocarpa]
          Length = 148

 Score =  126 bits (317), Expect = 3e-27
 Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 9/152 (5%)
 Frame = -2

Query: 561 MEISAIITCSVPKTP----LSSCNSTLFNNGSRTILLNNNKKRTSCLVLNRNRSR----- 409
           MEIS+I T S PK P     SS  ST FN    T   N + K  + LVL + RSR     
Sbjct: 1   MEISSI-TLSFPKPPPCLPFSSSQSTFFNT---TAFFNKSSKSYNSLVLGKTRSRSQRAK 56

Query: 408 KGLTVRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKXX 229
           KGLT  +LFGLGVPELVVIAGVA L+FGPK+LPEVG+SIGKTVKSFQQAAKEFESELK  
Sbjct: 57  KGLTCNALFGLGVPELVVIAGVATLLFGPKQLPEVGRSIGKTVKSFQQAAKEFESELKKE 116

Query: 228 XXXXXXXXXXXXXXXXXXKQNETKIPSTEESL 133
                             K++++++ S++ES+
Sbjct: 117 PDSTSDTPGEQPTTISEEKKHDSEVSSSKESV 148


>ref|XP_004135654.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like [Cucumis sativus]
          Length = 158

 Score =  114 bits (286), Expect = 1e-23
 Identities = 69/114 (60%), Positives = 76/114 (66%), Gaps = 12/114 (10%)
 Frame = -2

Query: 540 TCSVPKTP------LSSCNSTLF-NNGSRTILLNNNKKRTSCLVLNRNRS-----RKGLT 397
           T S+PK P       SS  S  F NN + +     +   +S L L   R+      KG T
Sbjct: 11  TSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKGFT 70

Query: 396 VRSLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 235
             +LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK
Sbjct: 71  CNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 124


>ref|XP_004171639.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 146

 Score =  113 bits (282), Expect = 3e-23
 Identities = 68/112 (60%), Positives = 75/112 (66%), Gaps = 12/112 (10%)
 Frame = -2

Query: 534 SVPKTP------LSSCNSTLF-NNGSRTILLNNNKKRTSCLVLNRNRS-----RKGLTVR 391
           S+PK P       SS  S  F NN + +     +   +S L L   R+      KG T  
Sbjct: 1   SIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRTTTKTTHKGFTCN 60

Query: 390 SLFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 235
           +LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK
Sbjct: 61  ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 112